Clone RH55216 Report

Search the DGRC for RH55216

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:552
Well:16
Vector:pFlc-1
Associated Gene/TranscriptKah-RA
Protein status:RH55216.pep: gold
Preliminary Size:1637
Sequenced Size:2837

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17181 2002-01-01 Sim4 clustering to Release 2
CG17181 2003-01-01 Sim4 clustering to Release 3
CG17181 2008-04-29 Release 5.5 accounting
CG17181 2008-08-15 Release 5.9 accounting
CG17181 2008-12-18 5.12 accounting

Clone Sequence Records

RH55216.complete Sequence

2837 bp assembled on 2007-04-18

GenBank Submission: BT024189

> RH55216.complete
GGCTCAGTTCTTCCTGGGATCTCGCTGCGTTCGCTCGCCTTCACGGATGC
GCAATCCGTCCGTGCGACTAATAAATCCGTTTGACACTTATCGAGATTCA
GTGCGATCCCCAAAATCAGCATCACCAATCACCCATCACCCATCACCCGT
TGCCATCGCGGACTCTTGGCGGGTGATGAGATTCGTGGAATTTGCGCTCC
GTGTGTGATAAAGCATTGACTTCCCATCGGCAACTGAATCATCCGTCTAT
ATTCGAGGCGGAGCGACGACGGCAGTGGATTGTTTTCCGTCAACTATTCG
AACTGCGTGGGGCATTTCACCAGCTCTTCAACACGATGACGAAGGACCAG
CAGGCGACACCCATTCCCGAGGAGTTGTACAATCTCACCCAGCTGGCCGA
GGTTACTCTGTCCGTTGGTCCTCTGGTCACGGACGAGGTGAAGCCACTGC
CACTGTACGCCTCCTCGGACGACGACTCCAACTACTACAGCCACAAGGTC
TTCGATCGCAGGAAACTGCGTCGTTGCACAATCTCCGACTCGAATTCCTG
CGCCAGCAGCAGTTCCAGTTCCACCTCCAGCCGTCAATCCTCGGAGGACC
ACCTGGGACTCCAGGGGCACTCATCGGTGCACCACCATCATGGGGAGCAG
GGCGAAATCCTCAACAGCACTTCGTTGCTGGAGGACGAGCACATCTGTCC
CGAGTGCGGAAAGAAATACTCCACATCCTCCAACCTAGCACGTCATAGAC
AAACGCACAGATCAATCATGGATAAGAAAGCGCGTCACTGTCCTTATTGC
GAGAAGGTGTACGTTTCGATGCCCGCCTACTCGATGCATGTGCGCACCCA
CAATCAGGGATGCGAGTGTCAGTTCTGCGGCAAGCGCTTCTCAAGGCCCT
GGCTCCTCCAGGGCCACATCCGCACCCACACAGGCGAAAAGCCCTTCAAG
TGCGGCGTCTGCGAGAAGGCGTTCGCCGACAAGAGCAACCTGCGCGCCCA
CATCCAGACCCACTCGAACACCAAGCCACACACATGTGCGCGATGCGGCA
AGGCCTTCGCTCTCAAGTCCTACCTGTACAAGCACGAGGAGTCATCGTGC
ATGAAGAATCGAGGAGGCGTTCCGGGATCGGGAGCAGCATCCGGCAACCG
ACCTCCCTCGTCGCCAAAAAGGCAACAGGCGGAGGTAACAAGCGGCACCA
TCTCGGCATTGGCTCCTGGATCACCTGCCGCGGCAGTGTGTGCTGCCTCC
GATTCAGCCAAGTCTACGCTGGCCAACAAGCTGTTGCAGAAGGAAAAGGA
TCGCAGGCAGGCGGCCATGGCCTTCCAGGGCTTTCCGGCTGGGCCAGAAG
TGACGGCTTACAGCCACGCAACTTCGGCCCAGGAGGAATATGAGAAGTTC
AAGCGGATCAACGTGATTCAGCCGAAAGTGATGCCGCATAGGGTACCCAG
CCTGTACCAGGACCTGCTCCCCAATCGCCACGTGCCACTGGCCCTGCCTT
TGGCGATGCCGTATCACTTTCAGGGCCAGGCCACGTCCACGGGCCAATCG
GATCCCACCTCCGTGCAGGAGCAGCCCGTTGACTTTTCGCCCAAGAACAA
CTTCACGCACTCGGCCAAGACGAGTCCCTTCGAGCTGACCGGGAATTACG
CCATGGTGGCATAGGATCTTACCAGCCAGGATACCACGCAAAAGACACGG
AGAGAGCAAAGCAGAGCACTACCCCAAGGCCATTCGAGGAGACCGTTACT
GAAATGCCACTTAATCCAAGTCCTTTCACAGCCCACCAGCCACCACCAAT
CCAGGACATTTTCTTACTGTAGTCAACGAATATGTGATAATAATGCAAAA
GAGCTAAAGTACCATTAGAGAGTAGATGATTCCAGAGCAAAGAGGAGCAC
GCACAGCTCGTCGAACAGAAGAGTTCCCTCTTCTCGGAAAACTCCAAGGA
AGGCGAGGTCATACACAGTAGATATAGAGAGACAAGGTTGGATCGATTCC
CGATTGATCGTTTGATCTTCACTTAGTTGTAATAAGAGACTTCTTAGAGA
CTTGCCAAGAACAGCGACAAAAAACCAATGTAACCAGTATTTTTTTATAG
CACATACGATTACCGATCGATCGGAGAGCGAAAGATATAGCATCCCAGCC
CCAGACGATCGAACTCCGCAGCCAAGCTACAAACTTTACACATAGTCATC
TAGCTTTATGATTTTACAAGAAGCATAGGAATATCCAAAGATATCCACCC
CACTTACTAACCCCATTAATCACTTCGCATTAAGGCATTGATCGGCTTCC
TGCTTCCGGCACGGAAGTCGTTCCAAAACGAGAGAATTTCTAGTCTTTAT
ATTTAAATAAAGCGCACATTTGGCGAGATCGGGAGCATTCCCGATCCCAT
CCCCTTTTGTGCGTGGCGTTACTTTAAGCACTTTATGGCCGCATGTGGTG
CAATAATTGACATATATGTATGGCTAATTAGCGCCTGGCACTTAACCATA
TTGCAATCTGTATACTTCTACTAGCACGATTCGGAGCAATCGGCCTTCTC
ATTGTGGCCTTACCATCTAGTATCGATCGATAGACAGATACTCACTGCAT
TTCGATTCGACTCGATTCACTCCGATTCGATCTACAGCTCTACAGCTAAT
CGCACCAAAGATACTTCGATTTAGATGCGCACGCATACTACCTTTATTTA
CTCGTACTTACCATATACACCAAAAGATATATACACGTATACGTAGCTAT
AAAATGTACTATAGATTTGCACATTAACTCGAATTAAACAAGAGATCCGA
TCCATTGATCCCCGAGAAAATACAAAAAAAAAAAAAA

RH55216.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:42:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG17181-RA 2927 CG17181-RA 102..2927 2..2826 14090 99.9 Plus
CG17181.a 3209 CG17181.a 384..3209 2..2826 14090 99.9 Plus
sna-RA 1677 sna-RA 1050..1170 833..953 215 78.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:02:21
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 582680..584266 2823..1238 7810 99.6 Minus
chr3L 24539361 chr3L 584335..584814 1238..759 2400 100 Minus
chr3L 24539361 chr3L 584873..585322 760..311 2190 99.1 Minus
chr3L 24539361 chr3L 588818..589128 312..2 1555 100 Minus
chr2L 23010047 chr2L 15475810..15475930 953..833 215 78.5 Minus
chr3L 24539361 chr3L 3958089..3958231 1016..874 205 76.2 Minus
chr2L 23010047 chr2L 15422793..15422880 948..861 185 80.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:33:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:02:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 582820..584410 2827..1238 7905 99.9 Minus
3L 28110227 3L 584479..584958 1238..759 2400 100 Minus
3L 28110227 3L 585017..585466 760..311 2250 100 Minus
3L 28110227 3L 588962..589272 312..2 1555 100 Minus
2L 23513712 2L 15477100..15477220 953..833 215 78.5 Minus
3L 28110227 3L 3958746..3958888 1016..874 205 76.2 Minus
2L 23513712 2L 15424066..15424153 948..861 185 80.7 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 582820..584410 2827..1238 7915 99.9 Minus
3L 28103327 3L 584479..584958 1238..759 2400 100 Minus
3L 28103327 3L 585017..585466 760..311 2250 100 Minus
3L 28103327 3L 588962..589272 312..2 1555 100 Minus
2L 23513712 2L 15477100..15477220 953..833 215 78.5 Minus
3L 28103327 3L 3958817..3958888 945..874 195 84.7 Minus
Blast to na_te.dros performed 2019-03-16 15:02:19
Subject Length Description Subject Range Query Range Score Percent Strand
accord 7404 accord ACCORD 7404bp 1438..1493 2706..2763 131 74.1 Plus
invader5 4038 invader5 INVADER5 4038bp 1..112 2793..2686 119 58 Minus
invader5 4038 invader5 INVADER5 4038bp 3687..3798 2793..2686 119 58 Minus

RH55216.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:03:18 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 582680..584265 1239..2823 97 <- Minus
chr3L 584335..584812 761..1238 100 <- Minus
chr3L 584873..585321 312..760 99 <- Minus
chr3L 588819..589128 1..311 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:49:49 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
CG17181-RA 1..1329 336..1664 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:18:28 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
CG17181-RA 1..1329 336..1664 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:32:08 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
CG17181-RA 1..1329 336..1664 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:14:22 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
CG17181-RA 1..1329 336..1664 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:39:45 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
Kah-RA 1..1329 336..1664 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:33:37 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
CG17181-RA 1..2823 2..2823 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:18:28 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
CG17181-RA 1..2823 2..2823 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:32:08 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
CG17181-RA 2..2825 1..2823 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:14:22 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
CG17181-RA 1..2823 2..2823 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:39:45 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
Kah-RA 2..2825 1..2823 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:03:18 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
3L 582824..584409 1239..2823 99 <- Minus
3L 584479..584956 761..1238 100 <- Minus
3L 585017..585465 312..760 100 <- Minus
3L 588963..589272 1..311 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:03:18 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
3L 582824..584409 1239..2823 99 <- Minus
3L 584479..584956 761..1238 100 <- Minus
3L 585017..585465 312..760 100 <- Minus
3L 588963..589272 1..311 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:03:18 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
3L 582824..584409 1239..2823 99 <- Minus
3L 584479..584956 761..1238 100 <- Minus
3L 585017..585465 312..760 100 <- Minus
3L 588963..589272 1..311 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:32:08 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 582824..584409 1239..2823 99 <- Minus
arm_3L 588963..589272 1..311 99   Minus
arm_3L 584479..584956 761..1238 100 <- Minus
arm_3L 585017..585465 312..760 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:07:39 Download gff for RH55216.complete
Subject Subject Range Query Range Percent Splice Strand
3L 584479..584956 761..1238 100 <- Minus
3L 582824..584409 1239..2823 99 <- Minus
3L 585017..585465 312..760 100 <- Minus
3L 588963..589272 1..311 99   Minus

RH55216.pep Sequence

Translation from 335 to 1663

> RH55216.pep
MTKDQQATPIPEELYNLTQLAEVTLSVGPLVTDEVKPLPLYASSDDDSNY
YSHKVFDRRKLRRCTISDSNSCASSSSSSTSSRQSSEDHLGLQGHSSVHH
HHGEQGEILNSTSLLEDEHICPECGKKYSTSSNLARHRQTHRSIMDKKAR
HCPYCEKVYVSMPAYSMHVRTHNQGCECQFCGKRFSRPWLLQGHIRTHTG
EKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFALKSYLYKH
EESSCMKNRGGVPGSGAASGNRPPSSPKRQQAEVTSGTISALAPGSPAAA
VCAASDSAKSTLANKLLQKEKDRRQAAMAFQGFPAGPEVTAYSHATSAQE
EYEKFKRINVIQPKVMPHRVPSLYQDLLPNRHVPLALPLAMPYHFQGQAT
STGQSDPTSVQEQPVDFSPKNNFTHSAKTSPFELTGNYAMVA*

RH55216.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:14:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25038-PA 460 GF25038-PA 1..460 1..442 1448 69.8 Plus
Dana\GF24781-PA 614 GF24781-PA 429..570 121..262 504 62 Plus
Dana\GF25020-PA 670 GF25020-PA 470..610 118..258 494 63.1 Plus
Dana\GF14525-PA 548 GF14525-PA 342..486 121..261 424 54.5 Plus
Dana\GF15382-PA 483 GF15382-PA 323..456 121..250 411 56.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:14:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14656-PA 490 GG14656-PA 46..490 1..442 1850 86.1 Plus
Dere\GG14232-PA 621 GG14232-PA 443..584 121..262 503 62 Plus
Dere\GG15174-PA 652 GG15174-PA 465..605 118..258 491 62.4 Plus
Dere\GG24207-PA 548 GG24207-PA 347..485 121..255 420 56.1 Plus
Dere\GG25158-PA 465 GG25158-PA 306..441 121..252 413 56.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:14:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15211-PA 439 GH15211-PA 1..439 1..442 1199 63.4 Plus
Dgri\GH15707-PA 702 GH15707-PA 513..657 121..265 513 62.1 Plus
Dgri\GH15771-PA 659 GH15771-PA 456..596 118..258 494 63.1 Plus
Dgri\GH13119-PA 563 GH13119-PA 356..500 121..261 433 55.2 Plus
Dgri\GH13754-PA 546 GH13754-PA 377..512 121..252 412 56.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
Kah-PA 442 CG17181-PA 1..442 1..442 2355 100 Plus
CG12605-PC 474 CG12605-PC 255..437 73..262 505 51.1 Plus
CG12605-PE 619 CG12605-PE 400..582 73..262 505 51.1 Plus
CG12605-PD 619 CG12605-PD 400..582 73..262 505 51.1 Plus
CG12605-PA 619 CG12605-PA 400..582 73..262 505 51.1 Plus
CG12605-PB 619 CG12605-PB 400..582 73..262 505 51.1 Plus
scrt-PB 653 CG1130-PB 466..639 118..283 499 54.6 Plus
scrt-PA 653 CG1130-PA 466..639 118..283 499 54.6 Plus
wor-PA 548 CG4158-PA 347..499 121..270 452 53.9 Plus
esg-PA 470 CG3758-PA 311..460 121..269 451 54.2 Plus
sna-PA 390 CG3956-PA 247..385 121..255 417 54 Plus
CG15269-PA 587 CG15269-PA 357..485 121..250 336 47 Plus
CG15436-PA 346 CG15436-PA 128..259 121..253 302 42.2 Plus
Cf2-PA 510 CG11924-PA 366..503 119..250 285 39.9 Plus
Cf2-PG 537 CG11924-PG 366..537 119..305 274 33.7 Plus
rn-PC 692 CG42277-PC 215..492 73..325 268 26.9 Plus
Meics-PB 571 CG8474-PB 305..446 96..250 266 34.4 Plus
Meics-PA 583 CG8474-PA 317..458 96..250 266 34.4 Plus
rn-PF 927 CG42277-PF 500..727 121..325 266 29.4 Plus
rn-PE 946 CG42277-PE 519..746 121..325 266 29.4 Plus
rn-PG 952 CG42277-PG 519..746 121..325 266 29.4 Plus
CG5245-PA 501 CG5245-PA 68..239 54..250 260 30.7 Plus
CG15436-PA 346 CG15436-PA 184..313 121..251 259 36.8 Plus
CG2129-PA 465 CG2129-PA 190..427 50..251 259 30.1 Plus
gl-PA 604 CG7672-PA 437..590 119..269 259 33.1 Plus
gl-PC 679 CG7672-PC 437..590 119..269 259 33.1 Plus
sens-2-PB 746 CG31632-PB 478..638 89..250 259 35.8 Plus
sens-2-PA 746 CG31632-PA 478..638 89..250 259 35.8 Plus
CG6808-PB 375 CG6808-PB 139..360 25..253 257 29.8 Plus
CG6808-PA 375 CG6808-PA 139..360 25..253 257 29.8 Plus
Cf2-PF 431 CG11924-PF 315..424 119..250 256 38.6 Plus
Cf2-PE 482 CG11924-PE 366..475 119..250 256 38.6 Plus
Cf2-PB 482 CG11924-PB 366..475 119..250 256 38.6 Plus
Cf2-PC 482 CG11924-PC 366..475 119..250 256 38.6 Plus
CG12299-PA 736 CG12299-PA 321..557 84..318 255 27 Plus
crol-PF 907 CG14938-PF 361..492 119..250 254 36.3 Plus
CG7372-PA 971 CG7372-PA 597..892 65..341 252 26.7 Plus
CG18262-PA 469 CG18262-PA 251..380 121..251 251 37.6 Plus
crol-PH 686 CG14938-PH 175..314 111..250 249 34.3 Plus
su(Hw)-PC 941 CG8573-PC 354..518 94..253 249 32.1 Plus
su(Hw)-PB 941 CG8573-PB 354..518 94..253 249 32.1 Plus
su(Hw)-PA 941 CG8573-PA 354..518 94..253 249 32.1 Plus
gl-PB 557 CG7672-PB 437..554 119..237 248 37.2 Plus
crol-PF 907 CG14938-PF 443..576 116..250 247 35 Plus
crol-PD 878 CG14938-PD 414..547 116..250 247 35 Plus
CG11902-PB 1426 CG11902-PB 1270..1399 120..250 247 36.8 Plus
sens-2-PB 746 CG31632-PB 521..669 91..253 246 34.5 Plus
sens-2-PA 746 CG31632-PA 521..669 91..253 246 34.5 Plus
CG12299-PA 736 CG12299-PA 136..359 67..253 246 30.8 Plus
erm-PB 603 CG31670-PB 274..468 73..250 246 31.8 Plus
erm-PA 611 CG31670-PA 282..476 73..250 246 31.8 Plus
erm-PC 654 CG31670-PC 282..476 73..250 246 31.8 Plus
erm-PD 698 CG31670-PD 282..476 73..250 246 31.8 Plus
crol-PC 756 CG14938-PC 175..341 111..250 245 32.3 Plus
CG9215-PA 560 CG9215-PA 306..463 120..282 243 32.7 Plus
CG14711-PA 377 CG14711-PA 228..328 152..250 241 42.6 Plus
Meics-PB 571 CG8474-PB 229..362 120..250 238 36.6 Plus
Meics-PB 571 CG8474-PB 341..474 116..250 238 33.6 Plus
Meics-PA 583 CG8474-PA 241..374 120..250 238 36.6 Plus
Meics-PA 583 CG8474-PA 353..486 116..250 238 33.6 Plus
crol-PF 907 CG14938-PF 415..548 116..250 237 32.1 Plus
crol-PH 686 CG14938-PH 237..370 116..250 237 32.8 Plus
crol-PH 686 CG14938-PH 298..426 121..250 237 34.1 Plus
crol-PD 878 CG14938-PD 386..519 116..250 237 32.1 Plus
crol-PC 756 CG14938-PC 236..369 116..250 237 32.8 Plus
crol-PC 756 CG14938-PC 297..425 121..250 237 34.1 Plus
crol-PH 686 CG14938-PH 321..631 116..413 236 24.5 Plus
crol-PF 907 CG14938-PF 250..382 120..253 233 33.1 Plus
CG5245-PA 501 CG5245-PA 329..490 116..250 232 30.2 Plus
gl-PA 604 CG7672-PA 433..539 146..250 232 38.3 Plus
gl-PC 679 CG7672-PC 433..539 146..250 232 38.3 Plus
crol-PF 907 CG14938-PF 471..608 116..253 232 33.3 Plus
gl-PB 557 CG7672-PB 433..539 146..250 232 38.3 Plus
crol-PD 878 CG14938-PD 358..491 116..250 232 33.6 Plus
crol-PD 878 CG14938-PD 442..579 116..253 232 33.3 Plus
crol-PC 756 CG14938-PC 320..457 116..253 232 33.3 Plus
Meics-PB 571 CG8474-PB 250..421 102..253 229 28.6 Plus
Meics-PA 583 CG8474-PA 262..433 102..253 229 28.6 Plus
CG15269-PA 587 CG15269-PA 289..429 110..250 227 31.7 Plus
CG5245-PA 501 CG5245-PA 123..352 48..252 227 24.3 Plus
Meics-PB 571 CG8474-PB 374..507 121..253 225 34.3 Plus
Meics-PA 583 CG8474-PA 386..519 121..253 225 34.3 Plus
CG14711-PA 377 CG14711-PA 150..356 31..250 225 27.5 Plus
crol-PF 907 CG14938-PF 279..407 121..250 224 31.8 Plus
crol-PD 878 CG14938-PD 250..379 120..250 224 32.3 Plus
CG5245-PA 501 CG5245-PA 273..419 116..263 223 33.3 Plus
crol-PD 878 CG14938-PD 335..463 121..250 222 32.6 Plus
gl-PA 604 CG7672-PA 462..573 116..228 215 34.8 Plus
gl-PC 679 CG7672-PC 462..573 116..228 215 34.8 Plus
Meics-PB 571 CG8474-PB 351..536 84..250 213 29.6 Plus
Meics-PA 583 CG8474-PA 363..548 84..250 213 29.6 Plus
CG5245-PA 501 CG5245-PA 390..492 121..224 211 39.6 Plus
su(Hw)-PC 941 CG8573-PC 370..588 70..286 204 25.2 Plus
su(Hw)-PB 941 CG8573-PB 370..588 70..286 204 25.2 Plus
su(Hw)-PA 941 CG8573-PA 370..588 70..286 204 25.2 Plus
CG11902-PB 1426 CG11902-PB 1191..1343 95..250 200 32.5 Plus
crol-PF 907 CG14938-PF 499..665 116..250 198 29.2 Plus
crol-PD 878 CG14938-PD 470..636 116..250 198 29.2 Plus
crol-PC 756 CG14938-PC 348..514 116..250 198 29.2 Plus
CG12299-PA 736 CG12299-PA 256..385 121..250 188 27.8 Plus
rn-PF 927 CG42277-PF 370..574 46..250 186 27.1 Plus
rn-PE 946 CG42277-PE 389..593 46..250 186 27.1 Plus
rn-PG 952 CG42277-PG 389..593 46..250 186 27.1 Plus
CG14711-PA 377 CG14711-PA 228..303 178..253 185 42.1 Plus
CG15436-PA 346 CG15436-PA 212..340 121..250 182 29.5 Plus
gl-PB 557 CG7672-PB 462..554 116..209 181 35.4 Plus
erm-PB 603 CG31670-PB 363..470 116..224 175 33.3 Plus
erm-PA 611 CG31670-PA 371..478 116..224 175 33.3 Plus
erm-PC 654 CG31670-PC 371..478 116..224 175 33.3 Plus
erm-PD 698 CG31670-PD 371..478 116..224 175 33.3 Plus
CG12299-PA 736 CG12299-PA 250..335 173..257 172 38.4 Plus
CG15269-PA 587 CG15269-PA 411..515 119..222 171 34.3 Plus
CG11902-PB 1426 CG11902-PB 1299..1405 121..228 169 32.7 Plus
CG15436-PA 346 CG15436-PA 127..203 177..253 168 37.7 Plus
crol-PF 907 CG14938-PF 555..874 116..414 168 22.8 Plus
crol-PD 878 CG14938-PD 526..845 116..414 168 22.8 Plus
crol-PC 756 CG14938-PC 404..723 116..414 168 22.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:14:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16731-PA 438 GI16731-PA 1..438 1..442 1146 60.8 Plus
Dmoj\GI12763-PA 735 GI12763-PA 556..697 121..262 502 61.3 Plus
Dmoj\GI12551-PA 672 GI12551-PA 480..620 118..258 495 63.1 Plus
Dmoj\GI22651-PA 588 GI22651-PA 381..519 121..255 418 56.1 Plus
Dmoj\GI17894-PA 537 GI17894-PA 370..505 121..252 412 56.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:14:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22596-PA 400 GL22596-PA 1..400 1..442 1218 64.3 Plus
Dper\GL26425-PA 499 GL26425-PA 337..484 121..271 431 53.5 Plus
Dper\GL26594-PA 558 GL26594-PA 363..512 121..270 422 53.2 Plus
Dper\GL26593-PA 408 GL26593-PA 265..403 121..255 394 53.2 Plus
Dper\GL13205-PA 183 GL13205-PA 91..181 116..206 315 60.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14370-PA 413 GA14370-PA 1..413 1..442 1343 67.9 Plus
Dpse\GA11715-PA 633 GA11715-PA 446..587 121..262 503 62 Plus
Dpse\GA17666-PA 499 GA17666-PA 337..484 121..271 431 53.5 Plus
Dpse\GA17994-PA 561 GA17994-PA 359..514 121..272 423 51.9 Plus
Dpse\GA17803-PA 410 GA17803-PA 267..405 121..255 394 53.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:14:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14272-PA 442 GM14272-PA 1..442 1..442 2334 97.5 Plus
Dsec\GM14024-PA 619 GM14024-PA 441..582 121..262 504 62 Plus
Dsec\GM14603-PA 656 GM14603-PA 469..609 118..258 492 62.4 Plus
Dsec\GM11368-PA 247 GM11368-PA 60..200 118..258 487 62.4 Plus
Dsec\GM14357-PA 529 GM14357-PA 328..466 121..255 417 55.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:14:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13528-PA 142 GD13528-PA 1..142 1..142 740 99.3 Plus
Dsim\GD13304-PA 283 GD13304-PA 105..246 121..262 494 62 Plus
Dsim\GD13794-PA 652 GD13794-PA 465..605 118..258 492 62.4 Plus
Dsim\GD13305-PA 229 GD13305-PA 51..192 121..262 490 62 Plus
Dsim\GD21956-PA 548 GD21956-PA 347..485 121..255 420 56.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:14:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12475-PA 472 GJ12475-PA 2..472 5..442 1257 58.7 Plus
Dvir\GJ16104-PA 646 GJ16104-PA 463..603 121..261 503 62.4 Plus
Dvir\GJ16103-PA 660 GJ16103-PA 462..602 118..258 491 63.1 Plus
Dvir\GJ23203-PA 568 GJ23203-PA 369..518 121..266 441 54.7 Plus
Dvir\GJ17399-PA 522 GJ17399-PA 355..493 121..255 417 56.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:14:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17557-PA 450 GK17557-PA 1..449 1..441 1231 60.8 Plus
Dwil\GK16692-PA 750 GK16692-PA 561..702 121..262 506 62 Plus
Dwil\GK17507-PA 716 GK17507-PA 515..655 118..258 499 63.1 Plus
Dwil\GK18133-PA 494 GK18133-PA 344..494 121..273 433 54.4 Plus
Dwil\GK18253-PA 523 GK18253-PA 344..486 121..259 419 54.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:14:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21016-PA 444 GE21016-PA 1..444 1..442 1905 87.9 Plus
Dyak\GE20660-PA 475 GE20660-PA 297..438 121..262 501 62 Plus
Dyak\GE21392-PA 659 GE21392-PA 472..612 118..258 491 62.4 Plus
Dyak\GE19402-PA 553 GE19402-PA 350..488 121..255 420 56.1 Plus
Dyak\GE20968-PA 467 GE20968-PA 308..443 121..252 412 56.6 Plus

RH55216.hyp Sequence

Translation from 335 to 1663

> RH55216.hyp
MTKDQQATPIPEELYNLTQLAEVTLSVGPLVTDEVKPLPLYASSDDDSNY
YSHKVFDRRKLRRCTISDSNSCASSSSSSTSSRQSSEDHLGLQGHSSVHH
HHGEQGEILNSTSLLEDEHICPECGKKYSTSSNLARHRQTHRSIMDKKAR
HCPYCEKVYVSMPAYSMHVRTHNQGCECQFCGKRFSRPWLLQGHIRTHTG
EKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFALKSYLYKH
EESSCMKNRGGVPGSGAASGNRPPSSPKRQQAEVTSGTISALAPGSPAAA
VCAASDSAKSTLANKLLQKEKDRRQAAMAFQGFPAGPEVTAYSHATSAQE
EYEKFKRINVIQPKVMPHRVPSLYQDLLPNRHVPLALPLAMPYHFQGQAT
STGQSDPTSVQEQPVDFSPKNNFTHSAKTSPFELTGNYAMVA*

RH55216.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:54:59
Subject Length Description Subject Range Query Range Score Percent Strand
Kah-PA 442 CG17181-PA 1..442 1..442 2355 100 Plus
CG12605-PC 474 CG12605-PC 255..437 73..262 505 51.1 Plus
CG12605-PE 619 CG12605-PE 400..582 73..262 505 51.1 Plus
CG12605-PD 619 CG12605-PD 400..582 73..262 505 51.1 Plus
CG12605-PA 619 CG12605-PA 400..582 73..262 505 51.1 Plus