Clone RH55631 Report

Search the DGRC for RH55631

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:556
Well:31
Vector:pFlc-1
Associated Gene/TranscriptActn-RF
Protein status:RH55631.pep: gold
Sequenced Size:3894

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Actn 2010-10-18 Manual selection by Sue Celniker

Clone Sequence Records

RH55631.complete Sequence

3894 bp assembled on 2011-02-14

GenBank Submission: BT126008.1

> RH55631.complete
GACCACGCTGTCAGCTGTTGTTTCGCGAAATGCTTCTTCTTGCGAATGCC
AATTACCGCGTCGCGTCTCTTTGTGATGATGGGATGGACTCAATTACTAC
AATTACAATAGAGATTGCAACAAATTAAATCAGCGTCGTGTGGTGTTGTC
GTGTCAGTGACGTGCCTGTGTGTGTGTGTGCTCGCGAGCACTGATAACTG
ATAGCCAAGGAAAAAAGTAAATAAACAACCGTCACCTTGCGGCGCATCAA
AAGCCACTGGCTGCAACAGCAGCAACTGGATCACCAACAACAACAACAGC
ACCACCAGCAGCAGTGAGAGCGAGCGAGAGAGTGTGCAGCGGGACAGGGA
ACGAGATAGATATATAACGATCGAGCGGAACATCTGACAGCGCCACAAGA
TGATGATGGAGAACGGACTCTCCATGGAGTACGGAGATGGCTACATGGAG
CAGGAGGAGGAGTGGGAGCGCGAGGGCCTGCTCGATCCTGCGTGGGAGAA
GCAACAGAAGAAGACATTTACCGCCTGGTGTAACAGCCATTTGCGCAAGG
CCGGTACAGCCATCGACAACATCGAGGAGGACTTCCGCAACGGCCTCAAG
CTGATGCTGCTGCTGGAGGTGATCTCCGGCGAGACGCTCCCCAAGCCCGA
TCGCGGCAAGATGCGCTTCCACAAGATCGCCAACGTGAACAAGGCTCTCG
ACTTCATCGCCTCCAAGGGCGTCCACCTGGTCTCTATCGGCGCCGAGGAG
ATCGTCGATGGAAACTTGAAGATGACTCTGGGTATGATCTGGACGATTAT
CCTGCGCTTCGCCATTCAGGACATCTCCGTGGAGGAGATGACCGCCAAGG
AGGGTCTGCTGCTGTGGTGCCAGCGCAAGACGGCTCCCTACAAGAACGTC
AACGTACAGAACTTCCATCTGTCGTTCAAGGATGGTCTGGCCTTCTGCGC
CCTTATCCATCGCCATCGTCCAGATCTAATCGACTACGCCAAGCTGTCCA
AAGACAATCCTCTGGAGAATCTTAATACTGCCTTCGATGTGGCCGAGAAG
TACCTGGATATTCCGCGCATGTTGGATCCAGATGATCTCCAGAATACAGC
TTTGCCCGATGAGCGGGCGGTGATGACGTATGTGTCCTCGTACTATCACT
GCTTCAGTGGCGCCCAAAAGGCGGAAACCGCTGCCAACCGGATCTGCAAG
GTGCTCAAGGTCAACCAGGAGAACGAACGCCTCATGGAGGAGTACGAGCG
TCTGGCCAGTGATTTGCTGGAGTGGATCCGTCGCACCATGCCCTGGTTGA
ACTCGCGCCAGGCCGACAACTCGCTGGCAGGTGTGCAGAAGAAGCTGGAG
GAGTACCGCACCTACCGTCGCAAGCACAAGCCACCACGTGTGGAGCAGAA
GGCCAAGCTGGAGACCAACTTCAACACGCTGCAGACCAAGCTGCGCCTGT
CCAACCGGCCCGCCTACCTGCCCACCGAGGGCAAGACCGTGTCCGACATC
TCCAACTCGTGGAAGGGCCTGGAGCTGGCCGAGAAGGCCTTTGAGGAATG
GCTGCTGGCCGAGACCATGCGCCTGGAGCGCCTTGAACATCTGGCCCAGA
AGTTCAAGCACAAGGCCGATGCCCACGAGGACTGGACGCGTGGCAAGGAG
GAGATGCTGCAGTCGCAGGACTTCCGCCAGTGCAAGCTCAACGAGCTGAA
GGCCCTAAAGAAGAAGCACGAAGCCTTTGAGTCTGACCTGGCCGCCCACC
AGGATCGTGTGGAGCAGATTGCCGCCATCGCCCAGGAGCTTAACGTGAGC
ACTCTGGAGTACCATGACTGTGTGTCTGTGAACGCCAGGTGCCAGCGCAT
CTGCGACCAATGGGATCGCTTGGGTGCTCTTACCCAGCGCAGGCGCACCG
CCTTAGACGAGGCCGAGCGAATCCTGGAGAAGATCGACATCTTGCATTTG
GAGTTCGCGAAGCGTGCGGCGCCGTTCAACAACTGGCTGGATGGTACGCG
CGAGGATCTTGTGGACATGTTTATTGTACACACCATGGAGGAAATCCAAG
GCCTGATCCAGGCGCACGACCAGTTCAAGGCGACCCTGGGTGAGGCCGAC
AAGGAGTTCAACCTGATCGTGAACCTGGTCCGCGAAGTGGAGTCGATTGT
GAAGCAGCACCAGATCCCCGGCGGCCTAGAGAACCCCTACACCACCCTGA
CCGCCAACGACATGACGCGCAAGTGGAGCGACGTCCGCCAACTGGTGCCC
CAACGCGACCAGACTTTGGCCAACGAGCTGCGCAAGCAACAGAACAACGA
AATGCTCCGCCGTCAGTTTGCCGAGAAGGCCAACATTGTCGGCCCCTGGA
TCGAGCGGCAAATGGATGCTGTTACGGCCATCGGTATGGGACTGCAGGGA
TCGCTGGAGGACCAACTGCACCGGCTCAAGGAGTACGAGCAGGCCGTCTA
CGCCTACAAGCCGAACATTGAGGAGCTGGAGAAGATCCACCAAGCGGTGC
AGGAATCGATGATCTTCGAGAACCGATACACCAACTACACGATGGAAACG
CTGCGCGTCGGCTGGGAGCAGCTGCTTACATCTATCAACCGCAACATCAA
CGAGGTGGAGAACCAGATTCTCACCCGCGACTCCAAGGGCATTAGCCAGG
AGCAGCTGAACGAATTCCGCAGCAGCTTCAACCACTTCGACAAGAACCGC
ACCGGCCGACTGTCGCCCGAGGAGTTCAAGTCGTGCTTGGTCTCGTTGGG
CTACTCGATTGGCAAGGATCGCCAGGGTGATTTGGACTTCCAGCGCATCC
TCGCCGTCGTCGATCCCAACAACACTGGCTACGTGCACTTCGACGCCTTC
CTCGACTTCATGACCCGCGAGAGCACCGATACCGACACTGCCGAACAAGT
CATCGACTCCTTCCGAATCCTGGCAGCCGACAAGCCATACATTTTGCCCG
ACGAACTGCGTCGCGAGTTGCCGCCAGACCAGGCCGAGTACTGCATCCAG
CGCATGCCGCCCTATAAGGGACCCAACGGAGTGCCCGGCGCCCTGGACTA
CATGTCCTTCAGCACAGCTCTCTACGGCGAGACCGACTTGTAAGAGCGCA
AGGCACCACCCGCATCCGAAGGACTGCATCGGCGAACCCGAGCAGAGCCA
GATCATATAATAATGATAAACTTTAATAATAATAATATTAATAAACATAG
ATTTATTATACCTACACTCGTAACAGTAGCTGCAGAAGAACTTCAGATCA
TCATGTGAGGATGAATATATTTATTAATTTCCGTCTCGAGCCGATGTATG
CGACCCACACATACAAAACACACAAGAAACAAATGAAAAACAAACATATT
ATGAAATGAAACACACATACATTTAAAACATTTGTAAAACAGCAAGGCAA
CCATAAACTGCATATCGAATATTTAAATCTAATTACAAAAACCAAGTCCA
AAAAACGCTAAAAAAAAGCTAAAACTTATTTTTTGAAATTTATGTTAATA
AAAACAAAATCCATACATAAAAACCAAAAACAAATAGAAATCTGAACGAG
ATTACTTTCCTTGAGTCTACAACGAAATTGATACCATAGGGGCGGTAACT
AGACAAAAGTGGGGAATTAGACTACTTCCGTTTCCGCTCACTCACCTTGA
GGTTCCACCAGACAGACAGAGATGGCGATAGAGCGAGAGAAATAGAGAGA
GAGATAGAGGCCACTAGATAAAAGGAAGAATACTCTTCTAGTTTCACACA
ATTACTGTAGACATTTATTCATCAACAATTTTCGAACTATCTCGAATATT
TTCACATTTTCAGATGTAAAACTACAATCCATATACACCACTCACATAAC
GAAAGATGAATAAAGCGATTTTTTGTGGAAAAAAAAAAAAAAAA

RH55631.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:38:01
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1919673..1920809 2934..1798 5685 100 Minus
chrX 22417052 chrX 1918654..1919599 3878..2933 4715 99.9 Minus
chrX 22417052 chrX 1924340..1924759 931..512 2100 100 Minus
chrX 22417052 chrX 1921418..1921769 1615..1264 1760 100 Minus
chrX 22417052 chrX 1935957..1936221 266..2 1325 100 Minus
chrX 22417052 chrX 1928857..1929107 513..263 1225 99.2 Minus
chrX 22417052 chrX 1921182..1921362 1793..1613 905 100 Minus
chrX 22417052 chrX 1924113..1924268 1084..929 780 100 Minus
chrX 22417052 chrX 1921833..1921931 1263..1165 480 99 Minus
chrX 22417052 chrX 1922562..1922649 1171..1084 440 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:37:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2025775..2026911 2934..1798 5685 100 Minus
X 23542271 X 2024755..2025701 3879..2933 4720 99.9 Minus
X 23542271 X 2030442..2030861 931..512 2100 100 Minus
X 23542271 X 2027520..2027871 1615..1264 1760 100 Minus
X 23542271 X 2042047..2042311 266..2 1325 100 Minus
X 23542271 X 2034955..2035205 513..263 1240 99.6 Minus
X 23542271 X 2027284..2027464 1793..1613 905 100 Minus
X 23542271 X 2030215..2030370 1084..929 780 100 Minus
X 23542271 X 2027935..2028033 1263..1165 480 99 Minus
X 23542271 X 2028664..2028751 1171..1084 440 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:06:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 2033873..2035009 2934..1798 5685 100 Minus
X 23527363 X 2032853..2033799 3879..2933 4720 99.8 Minus
X 23527363 X 2038540..2038959 931..512 2100 100 Minus
X 23527363 X 2035618..2035969 1615..1264 1760 100 Minus
X 23527363 X 2050145..2050409 266..2 1325 100 Minus
X 23527363 X 2043053..2043303 513..263 1240 99.6 Minus
X 23527363 X 2035382..2035562 1793..1613 905 100 Minus
X 23527363 X 2038313..2038468 1084..929 780 100 Minus
X 23527363 X 2036033..2036131 1263..1165 480 98.9 Minus
X 23527363 X 2036762..2036849 1171..1084 440 100 Minus
Blast to na_te.dros performed 2019-03-17 01:38:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1477..1586 201..314 190 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2297..2442 196..340 187 61.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2263..2372 209..314 181 65.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2284..2425 176..313 178 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2768..2913 244..391 175 63.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6823..6901 244..323 172 70 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6793 267..323 168 77.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..6812 267..321 167 78.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2357 263..314 161 78.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6779..6833 267..321 158 76.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6741..6853 203..314 157 64.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6847..7022 244..423 153 58.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2392 244..313 152 71.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2601..2675 245..323 151 69.6 Plus
roo 9092 roo DM_ROO 9092bp 1096..1156 260..323 151 73.4 Plus
roo 9092 roo DM_ROO 9092bp 1075..1139 260..321 147 72.3 Plus
roo 9092 roo DM_ROO 9092bp 1103..1163 245..303 147 73.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1580 267..330 146 71.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2783..2852 241..314 144 70.3 Plus
roo 9092 roo DM_ROO 9092bp 1077..1162 224..314 137 64.8 Plus
TART-A 13424 TART-A 13424bp 11239..11335 217..314 136 62.6 Plus
TART-A 13424 TART-A 13424bp 61..157 217..314 136 62.6 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3288..3341 261..314 135 72.2 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 975..1025 264..313 135 76.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2388..2456 245..314 131 67.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2373 272..340 126 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2499..2549 261..310 126 74.5 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 102..202 253..353 125 63.1 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9132..9232 253..353 125 63.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2588..2642 263..314 124 72.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2909..2962 244..298 119 70.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6512..6587 244..319 118 64.9 Plus

RH55631.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:38:48 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1928857..1929103 267..513 99 <- Minus
chrX 1918654..1919597 2935..3878 99 <- Minus
chrX 1919673..1920807 1800..2934 100 <- Minus
chrX 1921176..1921360 1615..1799 98 <- Minus
chrX 1921419..1921769 1264..1614 100 <- Minus
chrX 1921833..1921925 1171..1263 100 <- Minus
chrX 1922563..1922648 1085..1170 100 <- Minus
chrX 1924113..1924266 931..1084 100 <- Minus
chrX 1924341..1924757 514..930 100 <- Minus
chrX 1935957..1936221 1..266 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-02-14 12:08:31 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 1..2688 400..3093 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:46:12 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RF 1..2694 400..3093 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:04:54 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RF 1..2694 400..3093 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 12:08:30 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 1..3511 2..3518 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:46:12 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RF 1..3877 2..3878 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:04:54 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RF 1..3877 2..3878 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:48 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
X 2024756..2025699 2935..3878 99 <- Minus
X 2025775..2026909 1800..2934 100 <- Minus
X 2027278..2027462 1615..1799 98 <- Minus
X 2027521..2027871 1264..1614 100 <- Minus
X 2027935..2028027 1171..1263 100 <- Minus
X 2028665..2028750 1085..1170 100 <- Minus
X 2030215..2030368 931..1084 100 <- Minus
X 2030443..2030859 514..930 100 <- Minus
X 2034955..2035201 267..513 100 <- Minus
X 2042047..2042311 1..266 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:48 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
X 2024756..2025699 2935..3878 99 <- Minus
X 2025775..2026909 1800..2934 100 <- Minus
X 2027278..2027462 1615..1799 98 <- Minus
X 2027521..2027871 1264..1614 100 <- Minus
X 2027935..2028027 1171..1263 100 <- Minus
X 2028665..2028750 1085..1170 100 <- Minus
X 2030215..2030368 931..1084 100 <- Minus
X 2030443..2030859 514..930 100 <- Minus
X 2034955..2035201 267..513 100 <- Minus
X 2042047..2042311 1..266 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:48 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
X 2024756..2025699 2935..3878 99 <- Minus
X 2025775..2026909 1800..2934 100 <- Minus
X 2027278..2027462 1615..1799 98 <- Minus
X 2027521..2027871 1264..1614 100 <- Minus
X 2027935..2028027 1171..1263 100 <- Minus
X 2028665..2028750 1085..1170 100 <- Minus
X 2030215..2030368 931..1084 100 <- Minus
X 2030443..2030859 514..930 100 <- Minus
X 2034955..2035201 267..513 100 <- Minus
X 2042047..2042311 1..266 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:46:12 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1918789..1919732 2935..3878 99 <- Minus
arm_X 1919808..1920942 1800..2934 100 <- Minus
arm_X 1921311..1921495 1615..1799 98 <- Minus
arm_X 1921554..1921904 1264..1614 100 <- Minus
arm_X 1921968..1922060 1171..1263 100 <- Minus
arm_X 1922698..1922783 1085..1170 100 <- Minus
arm_X 1924248..1924401 931..1084 100 <- Minus
arm_X 1924476..1924892 514..930 100 <- Minus
arm_X 1928988..1929234 267..513 100 <- Minus
arm_X 1936080..1936344 1..266 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:57:33 Download gff for RH55631.complete
Subject Subject Range Query Range Percent Splice Strand
X 2036763..2036848 1085..1170 100 <- Minus
X 2038313..2038466 931..1084 100 <- Minus
X 2035619..2035969 1264..1614 100 <- Minus
X 2036033..2036125 1171..1263 100 <- Minus
X 2032854..2033797 2935..3878 99 <- Minus
X 2033873..2035007 1800..2934 100 <- Minus
X 2035376..2035560 1615..1799 98 <- Minus
X 2038541..2038957 514..930 100 <- Minus
X 2043053..2043299 267..513 100 <- Minus
X 2050145..2050409 1..266 99   Minus

RH55631.pep Sequence

Translation from 399 to 3092

> RH55631.pep
MMMENGLSMEYGDGYMEQEEEWEREGLLDPAWEKQQKKTFTAWCNSHLRK
AGTAIDNIEEDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKAL
DFIASKGVHLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAK
EGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLS
KDNPLENLNTAFDVAEKYLDIPRMLDPDDLQNTALPDERAVMTYVSSYYH
CFSGAQKAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRRTMPWL
NSRQADNSLAGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRL
SNRPAYLPTEGKTVSDISNSWKGLELAEKAFEEWLLAETMRLERLEHLAQ
KFKHKADAHEDWTRGKEEMLQSQDFRQCKLNELKALKKKHEAFESDLAAH
QDRVEQIAAIAQELNVSTLEYHDCVSVNARCQRICDQWDRLGALTQRRRT
ALDEAERILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQ
GLIQAHDQFKATLGEADKEFNLIVNLVREVESIVKQHQIPGGLENPYTTL
TANDMTRKWSDVRQLVPQRDQTLANELRKQQNNEMLRRQFAEKANIVGPW
IERQMDAVTAIGMGLQGSLEDQLHRLKEYEQAVYAYKPNIEELEKIHQAV
QESMIFENRYTNYTMETLRVGWEQLLTSINRNINEVENQILTRDSKGISQ
EQLNEFRSSFNHFDKNRTGRLSPEEFKSCLVSLGYSIGKDRQGDLDFQRI
LAVVDPNNTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAADKPYILP
DELRRELPPDQAEYCIQRMPPYKGPNGVPGALDYMSFSTALYGETDL*

RH55631.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:38:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21987-PA 921 GF21987-PA 1..921 1..897 4762 96.2 Plus
Dana\GF21115-PA 2291 GF21115-PA 49..561 33..567 1085 42.9 Plus
Dana\GF24206-PA 4383 GF24206-PA 48..610 5..571 934 38.4 Plus
Dana\GF24962-PA 2448 GF24962-PA 1961..2446 401..892 708 33.6 Plus
Dana\GF11157-PA 8806 GF11157-PA 162..519 36..403 652 40.1 Plus
Dana\GF24962-PA 2448 GF24962-PA 1729..2191 264..760 188 23.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:38:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12661-PA 921 GG12661-PA 1..921 1..897 4788 97 Plus
Dere\GG19125-PA 2291 GG19125-PA 49..561 33..567 1084 42.9 Plus
Dere\GG15134-PA 4354 GG15134-PA 48..553 5..509 926 40.5 Plus
Dere\GG14560-PA 2447 GG14560-PA 1960..2445 401..892 707 33.9 Plus
Dere\GG25055-PA 8391 GG25055-PA 637..889 33..252 406 38 Plus
Dere\GG14560-PA 2447 GG14560-PA 1728..2190 264..760 191 23.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:38:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24410-PA 921 GH24410-PA 1..921 1..897 4766 96.2 Plus
Dgri\GH17926-PA 2291 GH17926-PA 49..561 33..567 1075 42.9 Plus
Dgri\kst-PA 4382 GH14869-PA 56..532 36..509 936 41.4 Plus
Dgri\GH15717-PA 2438 GH15717-PA 1951..2436 401..892 698 33.2 Plus
Dgri\GH10367-PA 8390 GH10367-PA 658..906 33..247 387 38.6 Plus
Dgri\GH15717-PA 2438 GH15717-PA 1719..2181 264..760 193 23 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:00
Subject Length Description Subject Range Query Range Score Percent Strand
Actn-PF 897 CG4376-PF 1..897 1..897 4686 100 Plus
Actn-PA 895 CG4376-PA 1..895 1..897 4665 99.8 Plus
Actn-PI 895 CG4376-PI 1..895 1..897 4623 98.9 Plus
Actn-PD 895 CG4376-PD 1..895 1..897 4623 98.9 Plus
Actn-PB 895 CG4376-PB 1..895 1..897 4623 98.9 Plus
Actn-PJ 917 CG4376-PJ 1..917 1..897 4590 96.5 Plus
Actn-PH 917 CG4376-PH 1..917 1..897 4590 96.5 Plus
Actn-PG 917 CG4376-PG 1..917 1..897 4590 96.5 Plus
Actn-PC 917 CG4376-PC 1..917 1..897 4590 96.5 Plus
beta-Spec-PC 2147 CG5870-PC 27..741 13..740 1097 36.1 Plus
beta-Spec-PA 2291 CG5870-PA 27..741 13..740 1097 36.1 Plus
beta-Spec-PB 2308 CG5870-PB 27..741 13..740 1097 36.1 Plus
kst-PG 4321 CG12008-PG 48..610 5..571 934 37.5 Plus
kst-PE 4337 CG12008-PE 48..610 5..571 934 37.5 Plus
kst-PF 4097 CG12008-PF 26..559 36..571 929 38.2 Plus
kst-PA 4097 CG12008-PA 26..559 36..571 929 38.2 Plus
kst-PB 4118 CG12008-PB 26..559 36..571 929 38.2 Plus
kst-PH 4207 CG12008-PH 26..559 36..571 929 38.2 Plus
kst-PC 4207 CG12008-PC 26..559 36..571 929 38.2 Plus
alpha-Spec-PA 2415 CG1977-PA 1833..2413 292..892 728 30.3 Plus
alpha-Spec-PC 2447 CG1977-PC 1865..2445 292..892 728 30.3 Plus
alpha-Spec-PD 2425 CG1977-PD 1833..2423 292..892 719 30 Plus
alpha-Spec-PB 2457 CG1977-PB 1865..2455 292..892 719 30 Plus
shot-PE 5201 CG18076-PE 150..592 36..491 667 35.4 Plus
shot-PJ 5368 CG18076-PJ 39..481 36..491 667 35.4 Plus
shot-PK 5370 CG18076-PK 39..481 36..491 667 35.4 Plus
shot-PI 5375 CG18076-PI 39..481 36..491 667 35.4 Plus
shot-PG 5385 CG18076-PG 39..481 36..491 667 35.4 Plus
shot-PN 5388 CG18076-PN 39..481 36..491 667 35.4 Plus
shot-PB 5390 CG18076-PB 39..481 36..491 667 35.4 Plus
shot-PM 5479 CG18076-PM 150..592 36..491 667 35.4 Plus
shot-PL 5486 CG18076-PL 150..592 36..491 667 35.4 Plus
shot-PO 5499 CG18076-PO 150..592 36..491 667 35.4 Plus
shot-PA 5501 CG18076-PA 150..592 36..491 667 35.4 Plus
shot-PZ 5394 CG18076-PZ 39..487 36..491 650 35 Plus
shot-PAA 5408 CG18076-PAA 39..501 36..491 636 34 Plus
Msp300-PB 8382 CG42768-PB 629..879 33..250 388 38.3 Plus
Msp300-PK 11917 CG42768-PK 270..520 33..250 388 38.3 Plus
Msp300-PH 11986 CG42768-PH 270..520 33..250 388 38.3 Plus
Msp300-PI 11999 CG42768-PI 270..520 33..250 388 38.3 Plus
Msp300-PL 12308 CG42768-PL 629..879 33..250 388 38.3 Plus
Msp300-PD 12345 CG42768-PD 629..879 33..250 388 38.3 Plus
shot-PQ 5155 CG18076-PQ 208..551 136..491 370 29.2 Plus
shot-PC 5160 CG18076-PC 208..551 136..491 370 29.2 Plus
shot-PAD 5434 CG18076-PAD 208..551 136..491 370 29.2 Plus
shot-PX 5434 CG18076-PX 208..551 136..491 370 29.2 Plus
shot-PP 5458 CG18076-PP 208..551 136..491 370 29.2 Plus
shot-PAC 5462 CG18076-PAC 208..551 136..491 370 29.2 Plus
shot-PY 5463 CG18076-PY 208..551 136..491 370 29.2 Plus
shot-PH 8805 CG18076-PH 208..551 136..491 370 29.2 Plus
Msp300-PJ 7962 CG42768-PJ 270..538 33..250 367 35.4 Plus
alpha-Spec-PA 2415 CG1977-PA 1681..2158 253..760 249 22.5 Plus
alpha-Spec-PC 2447 CG1977-PC 1713..2190 253..760 249 22.5 Plus
alpha-Spec-PD 2425 CG1977-PD 1681..2158 253..760 249 22.5 Plus
alpha-Spec-PB 2457 CG1977-PB 1713..2190 253..760 249 22.5 Plus
alpha-Spec-PA 2415 CG1977-PA 144..468 267..618 171 22.8 Plus
alpha-Spec-PC 2447 CG1977-PC 144..468 267..618 171 22.8 Plus
alpha-Spec-PD 2425 CG1977-PD 144..468 267..618 171 22.8 Plus
alpha-Spec-PB 2457 CG1977-PB 144..468 267..618 171 22.8 Plus
alpha-Spec-PA 2415 CG1977-PA 1080..1515 284..740 168 19.8 Plus
alpha-Spec-PD 2425 CG1977-PD 1080..1515 284..740 168 19.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:38:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15429-PA 921 GI15429-PA 1..921 1..897 4759 96.1 Plus
Dmoj\GI16305-PA 2292 GI16305-PA 49..595 33..596 1084 41.6 Plus
Dmoj\GI12841-PA 4394 GI12841-PA 77..553 36..509 954 42.3 Plus
Dmoj\GI12773-PA 2441 GI12773-PA 1954..2439 401..892 701 33.4 Plus
Dmoj\GI21363-PA 7182 GI21363-PA 269..517 33..247 390 38.6 Plus
Dmoj\GI12773-PA 2441 GI12773-PA 1722..2184 264..760 196 23.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:38:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15130-PA 558 GL15130-PA 1..506 1..508 2659 97.8 Plus
Dper\GL15987-PA 2250 GL15987-PA 49..561 33..567 1081 42.7 Plus
Dper\GL13263-PA 361 GL13263-PA 36..361 2..330 710 45 Plus
Dper\GL17079-PA 4806 GL17079-PA 163..520 36..403 654 40.1 Plus
Dper\GL16211-PA 296 GL16211-PA 8..294 609..892 504 37.1 Plus
Dper\GL15130-PA 558 GL15130-PA 256..558 618..897 305 32.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:38:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18143-PA 921 GA18143-PA 1..921 1..897 4776 96.5 Plus
Dpse\GA19192-PA 2291 GA19192-PA 49..561 33..567 1082 42.7 Plus
Dpse\GA11331-PA 4408 GA11331-PA 82..558 36..509 927 41.4 Plus
Dpse\GA15168-PA 2415 GA15168-PA 1928..2413 401..892 703 33.9 Plus
Dpse\GA24356-PA 8812 GA24356-PA 164..521 36..403 652 40.1 Plus
Dpse\GA15168-PA 2415 GA15168-PA 1696..2158 264..760 189 23.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:38:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22606-PA 310 GM22606-PA 1..287 258..551 1423 93.2 Plus
Dsec\GM18928-PA 311 GM18928-PA 1..258 1..258 1360 96.5 Plus
Dsec\GM13519-PA 1245 GM13519-PA 49..561 33..567 1087 42.9 Plus
Dsec\GM14568-PA 4319 GM14568-PA 77..553 36..509 924 41.2 Plus
Dsec\GM14169-PA 2447 GM14169-PA 1960..2445 401..892 707 33.9 Plus
Dsec\GM22606-PA 310 GM22606-PA 12..310 627..897 231 28.8 Plus
Dsec\GM14169-PA 2447 GM14169-PA 1728..2190 264..760 185 23.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:38:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15677-PA 1205 GD15677-PA 49..561 33..567 1087 42.9 Plus
Dsim\GD13758-PA 1393 GD13758-PA 174..635 51..509 861 40 Plus
Dsim\GD13438-PA 2447 GD13438-PA 1960..2445 401..892 707 33.9 Plus
Dsim\GD15171-PA 447 GD15171-PA 25..240 36..252 348 36.8 Plus
Dsim\GD25733-PA 4046 GD25733-PA 208..466 136..403 348 33.8 Plus
Dsim\GD13438-PA 2447 GD13438-PA 1728..2190 264..760 187 23.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:38:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16390-PA 895 GJ16390-PA 1..895 1..897 4757 98.1 Plus
Dvir\GJ15641-PA 2291 GJ15641-PA 49..561 33..567 1079 42.7 Plus
Dvir\GJ12986-PA 4394 GJ12986-PA 77..553 36..509 957 42.5 Plus
Dvir\GJ16071-PA 2441 GJ16071-PA 1954..2439 401..892 698 33.2 Plus
Dvir\GJ11158-PA 8387 GJ11158-PA 641..905 33..260 406 37.8 Plus
Dvir\GJ16071-PA 2441 GJ16071-PA 1722..2184 264..760 195 23 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:39:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25747-PA 943 GK25747-PA 1..943 1..897 4751 94.2 Plus
Dwil\GK16406-PA 2292 GK16406-PA 49..561 33..567 1082 42.9 Plus
Dwil\GK20379-PA 4389 GK20379-PA 58..534 36..509 932 41.2 Plus
Dwil\GK20514-PA 2417 GK20514-PA 1930..2415 401..892 705 33.6 Plus
Dwil\GK24496-PA 7988 GK24496-PA 254..501 33..247 386 38.4 Plus
Dwil\GK20514-PA 2417 GK20514-PA 1698..2160 264..760 190 23.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:39:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16989-PA 883 GE16989-PA 1..883 1..897 4714 98 Plus
Dyak\GE17676-PA 2289 GE17676-PA 49..561 33..567 1084 42.9 Plus
Dyak\GE21360-PA 4355 GE21360-PA 77..553 36..509 924 41.2 Plus
Dyak\GE20915-PA 2447 GE20915-PA 1960..2445 401..892 707 33.9 Plus
Dyak\GE11346-PA 8015 GE11346-PA 274..521 33..247 390 38.4 Plus
Dyak\GE20915-PA 2447 GE20915-PA 1728..2190 264..760 188 23.3 Plus

RH55631.hyp Sequence

Translation from 399 to 1797

> RH55631.hyp
MMMENGLSMEYGDGYMEQEEEWEREGLLDPAWEKQQKKTFTAWCNSHLRK
AGTAIDNIEEDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKAL
DFIASKGVHLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAK
EGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLS
KDNPLENLNTAFDVAEKYLDIPRMLDPDDLQNTALPDERAVMTYVSSYYH
CFSGAQKAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRRTMPWL
NSRQADNSLAGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRL
SNRPAYLPTEGKTVSDISNSWKGLELAEKAFEEWLLAETMRLERLEHLAQ
KFKHKADAHEDWTRGKEEMLQSQDFRQCKLNELKALKKKHEAFESDLAAH
QDRVEQIAAIAQELK*

RH55631.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:28:13
Subject Length Description Subject Range Query Range Score Percent Strand
Actn-PF 897 CG4376-PF 1..464 1..464 2427 100 Plus
Actn-PA 895 CG4376-PA 1..464 1..464 2427 100 Plus
Actn-PI 895 CG4376-PI 1..464 1..464 2385 98.3 Plus
Actn-PD 895 CG4376-PD 1..464 1..464 2385 98.3 Plus
Actn-PB 895 CG4376-PB 1..464 1..464 2385 98.3 Plus