Clone RH55640 Report

Search the DGRC for RH55640

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:556
Well:40
Vector:pFlc-1
Associated Gene/TranscriptCG10333-RA
Protein status:RH55640.pep: gold
Sequenced Size:2670

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10333 2003-01-01 Sim4 clustering to Release 3
CG10333 2008-04-29 Release 5.5 accounting
CG10333 2008-08-15 Release 5.9 accounting
CG10333 2008-12-18 5.12 accounting

Clone Sequence Records

RH55640.complete Sequence

2670 bp (2670 high quality bases) assembled on 2004-12-17

GenBank Submission: BT021222

> RH55640.complete
GAGTGGTATTTATGGTACGGTCCTATTATCAGCTGTTTATTTCCACAAGC
CGAAAAATTTTACAAGTTTTTAATTAATTTGTAAGGAAAGTATGGTTAAC
GATAAAAAGCGTCGCTCACGATCGCGGGAGCGTCACAGGGAGGATCGTCC
GGCCGTGGGCAATCCGCGGGATCGAGAGCGAGAGAGGGATCGTGTGAGGG
AACGAGATAGGCAGTTCGATAGGGAGAAGGAAAGACGCCAACGTCGCTCG
CGTTCCCGAGAGGACCGCAACAGGCGAAGGTCACCCGAACGTCAAAGGCC
TAGGGATAATGTCCGAGAAAGGTCAAGAGAAAGAGGTGGTGGCGCCGGTG
GTGGAGGAGGAGGTGGTGCGGAAAAGAAGGCCAAAATGGATACTGGCGAT
GCCCCACCCAAACCTTTAATTGTTGACGACGAGGAGCAACAGGACGGCAA
GGAAGCAAAGGTGAAGAAAGAGCCGCTTTCGCTGGAGGAACTGCTGGACA
AAAAGAAACGCGAGGAGGAAGCCAGAAGCAAGCCAGTTTTCCTAACCAAG
GAGCAAAGAGCCCTGGAGGCCATCAAGCGACGCCAGGAGGAAGTGGAGCG
CCAGCGAGCTGCCCATGATGCTGCCCGTGAGCAAATGGCTGCCGCCAGCA
AGGTCAGTATCTCTATGGGCACGGCCATGGCATCAGGAGCTCCGCCGCCT
GCAATTGTGGCACCGCCACCCAAACCGGATCGTCGGGAACGAGGAGGTGG
TCGGGATCGAGGCGACAGAATTGACAGAGGAGAACGTGGCGATGACAAGC
GAGCTGAAGACCTCACCCACAAAGACAAGGAAAAGGAATTAGAAGCCATT
CGAGAACGCTACCTGGGCATAATCAAGAAGAAGCGCCGGGTTCGCCGACT
CAACGACCGCAAATTTGTTTTTGATTGGGATGCTGGAGAAGATACCTCCA
TTGACTACAACAATCTCTACAAGGAACGCCATCATGTGCAATTCTTTGGC
AGAGGAAATGTGGCTGGCATCGATATCAAAGAACAAAAGCGTACCCAGAG
CAAATTCTATGGAGATCTGCTGGAAAAAAGGCGAACCGAGGCGGAGAAGG
AACAGGAGAAAGTGCGACTAAAGAAGATGAAGCGCAAGGAGGACAAGCAG
AAGTGGGACGATCGACATTGGTCCGAGAAGGAAAATGATGAAATGACTGA
ACGCGATTGGCGTATCTTCAGGGAGGACTACAATGTTACAATTAAGGGTG
GGAGAATTCCCAATCCCATCCGAAGTTGGAATGAGTCCGGATTTCCCAAG
GAGATCATCGACATTATCGACAAAGTGGGCTACAAGGAACCAACGCCCAT
TCAGAGGCAAGCTATACCCATTGGTTTGCAGAACAGGGATATTATTGGCG
TCGCTGAGACCGGTTCCGGTAAAACATTGGCATTCCTCATACCCCTGCTC
TCTTGGATTCAGTCCTTGCCCAAGATCGAGCGTCTGGAGGATGTGGACCA
AGGACCCTATGCCATTATAATGGCTCCCACGCGTGAATTGGCCCAGCAAA
TCGAGGAGGAAACAACCAAGTTTGGACAACCTTTGGGCATACGAACTGTG
GTCGTTGTGGGTGGTTTGTCAAGAGAGGAGCAGGGCTTCCGCCTGCGATT
GGGCTGCGAGATTGTCATTGCTACGCCAGGTCGTCTCATTGATGTGCTGG
AAAATCGGTATTTGGTGCTGAACCAATGTACATACATTGTCCTCGATGAA
GCCGATCGTATGATAGACATGGGCTTCGAGCCAGATGTTCAAAAGATCTT
GGAGTACATGCCCGTCACCAACCTGAAGCCCGATACCGAGGAGGCTGAGG
ACGAAACAAAGCTGATGGAGAACTTCTACACTAAGAAGAAGTACCGCCAA
ACCGTGATGTTTACGGCAACGATGCCTCCGGCTGTGGAAAGATTAGCTCG
CACATATCTCCGGCGACCGGCAACGGTTTACATCGGATCTGTTGGCAAGC
CGACAGAGAGAACAGAGCAAATAGTGTACATGATGGGCGAGAACGACAAG
CGCAAGAAGCTTATGGAGATTCTTTCGAGGAAAATCGATCCACCAGTTAT
TATCTTTGTTAATCAAAAGAAGGGCGCCGATGTTTTGGCTAAGGGTCTGG
AGAAACTCGGCTACAACTCGTGCACATTGCACGGTGGCAAGGGTCAGGAG
CAGAGAGAGTATGCTTTGGCTGCTTTGAAGTCAGGCGCAAAGGACATCCT
GGTGGCCACCGACGTCGCTGGTCGTGGTATCGACATCAAGGACGTGTCCT
TGGTTATTAACTATGACATGGCCAAGACCATCGAGGATTACACACATCGT
ATCGGTCGTACGGGTCGTGCCGGCAAAACCGGTTGTGCCATTTCGTTTGT
CACCAAGGACGATAGCGCTTTGTTCTACGATCTAAAGCAATGTGTGTCTG
CAAGTCCTGTCTCGACCTGTCCGCCGGAGCTAATGAATCACCCGGAAGCG
CAGCACAAGCCTGGCACGGTGGTTACCAAAAAGCGCAGGGAGGAAAAAAT
ATTCGCCTAAATTTGGCAAATTCTAAGCAGAACTACTTTAGGTTAAAATT
TAAAACTAATAAAGTTGGGTGCGCCAAAGCCATACCTTGGCAACCAAAAA
TTCTCGAAAAAAAAAAAAAA

RH55640.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:50:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG10333-RA 2741 CG10333-RA 57..2710 2..2655 13270 100 Plus
CG10333.a 2644 CG10333.a 69..2639 85..2655 12855 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:42:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 18605857..18608260 252..2655 12005 100 Plus
chr2L 23010047 chr2L 18605544..18605800 2..258 1270 99.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:33:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:42:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18607147..18609550 252..2655 12005 100 Plus
2L 23513712 2L 18606834..18607090 2..258 1285 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:39:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18607147..18609550 252..2655 12005 99.9 Plus
2L 23513712 2L 18606834..18607090 2..258 1285 100 Plus
Blast to na_te.dros performed 2019-03-16 15:42:37
Subject Length Description Subject Range Query Range Score Percent Strand
G-element 4346 G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). 4266..4299 402..435 116 82.4 Plus

RH55640.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:43:27 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 18605543..18605800 1..258 99 -> Plus
chr2L 18605864..18608260 259..2656 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:49:58 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
CG10333-RA 1..2469 92..2560 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:21:46 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
CG10333-RA 1..2469 92..2560 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:16:59 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
CG10333-RA 1..2469 92..2560 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:05:46 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
CG10333-RA 1..2469 92..2560 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:46:59 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
CG10333-RA 1..2469 92..2560 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:22:50 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
CG10333-RA 2..2655 2..2656 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:21:46 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
CG10333-RA 2..2655 2..2656 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:16:59 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
CG10333-RA 2..2656 1..2655 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:05:47 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
CG10333-RA 2..2655 2..2656 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:46:59 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
CG10333-RA 2..2656 1..2655 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:43:27 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18606833..18607090 1..258 99 -> Plus
2L 18607154..18609550 259..2656 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:43:27 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18606833..18607090 1..258 99 -> Plus
2L 18607154..18609550 259..2656 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:43:27 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18606833..18607090 1..258 99 -> Plus
2L 18607154..18609550 259..2656 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:16:59 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18606833..18607090 1..258 99 -> Plus
arm_2L 18607154..18609550 259..2656 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:42:06 Download gff for RH55640.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18606833..18607090 1..258 99 -> Plus
2L 18607154..18609550 259..2656 99   Plus

RH55640.pep Sequence

Translation from 91 to 2559

> RH55640.pep
MVNDKKRRSRSRERHREDRPAVGNPRDRERERDRVRERDRQFDREKERRQ
RRSRSREDRNRRRSPERQRPRDNVRERSRERGGGAGGGGGGGAEKKAKMD
TGDAPPKPLIVDDEEQQDGKEAKVKKEPLSLEELLDKKKREEEARSKPVF
LTKEQRALEAIKRRQEEVERQRAAHDAAREQMAAASKVSISMGTAMASGA
PPPAIVAPPPKPDRRERGGGRDRGDRIDRGERGDDKRAEDLTHKDKEKEL
EAIRERYLGIIKKKRRVRRLNDRKFVFDWDAGEDTSIDYNNLYKERHHVQ
FFGRGNVAGIDIKEQKRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKE
DKQKWDDRHWSEKENDEMTERDWRIFREDYNVTIKGGRIPNPIRSWNESG
FPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLI
PLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQPLGI
RTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIV
LDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKK
YRQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVYMMGE
NDKRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGK
GQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDY
THRIGRTGRAGKTGCAISFVTKDDSALFYDLKQCVSASPVSTCPPELMNH
PEAQHKPGTVVTKKRREEKIFA*

RH55640.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:51:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15062-PA 819 GF15062-PA 1..819 1..822 3480 90.5 Plus
Dana\GF21236-PA 1211 GF21236-PA 477..881 368..797 832 42.1 Plus
Dana\GF10884-PA 822 GF10884-PA 126..530 369..799 820 40.7 Plus
Dana\GF16725-PA 693 GF16725-PA 261..645 389..799 754 41.3 Plus
Dana\GF24750-PA 613 GF24750-PA 92..474 369..775 750 39.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:51:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21122-PA 816 GG21122-PA 1..816 1..822 4226 97.9 Plus
Dere\GG17877-PA 1222 GG17877-PA 482..886 368..797 846 42.3 Plus
Dere\GG15018-PA 824 GG15018-PA 139..536 376..799 828 41.6 Plus
Dere\GG10666-PA 720 GG10666-PA 264..639 376..775 759 39.7 Plus
Dere\GG25145-PA 512 GG25145-PA 81..460 382..788 739 39.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11216-PA 864 GH11216-PA 48..864 28..822 3302 83 Plus
Dgri\GH17577-PA 1302 GH17577-PA 546..968 368..811 848 41.3 Plus
Dgri\GH22580-PA 793 GH22580-PA 128..525 376..799 814 40.9 Plus
Dgri\GH24775-PA 977 GH24775-PA 169..602 336..775 779 37.5 Plus
Dgri\GH14289-PA 746 GH14289-PA 282..657 376..775 760 39.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG10333-PA 822 CG10333-PA 1..822 1..822 4254 100 Plus
CG6227-PA 1224 CG6227-PA 82..879 3..788 879 30.3 Plus
CG10077-PD 818 CG10077-PD 139..536 376..799 817 41.6 Plus
CG10077-PA 818 CG10077-PA 139..536 376..799 817 41.6 Plus
mahe-PC 945 CG10777-PC 133..600 290..775 745 36 Plus
mahe-PB 945 CG10777-PB 133..600 290..775 745 36 Plus
Rm62-PH 575 CG10279-PH 120..495 376..775 739 39.9 Plus
Rm62-PD 575 CG10279-PD 120..495 376..775 739 39.9 Plus
Rm62-PI 578 CG10279-PI 123..498 376..775 739 39.9 Plus
Rm62-PF 578 CG10279-PF 123..498 376..775 739 39.9 Plus
Rm62-PE 578 CG10279-PE 123..498 376..775 739 39.9 Plus
Rm62-PB 578 CG10279-PB 123..498 376..775 739 39.9 Plus
Rm62-PC 578 CG10279-PC 123..498 376..775 739 39.9 Plus
Rm62-PA 719 CG10279-PA 264..639 376..775 739 39.9 Plus
vas-PC 661 CG46283-PC 233..612 382..788 733 39.9 Plus
vas-PB 661 CG46283-PB 233..612 382..788 733 39.9 Plus
vas-PA 661 CG46283-PA 233..612 382..788 733 39.9 Plus
abs-PA 619 CG14637-PA 70..569 297..806 724 35 Plus
CG7878-PA 703 CG7878-PA 277..661 389..799 708 40.7 Plus
bel-PA 798 CG9748-PA 279..674 378..781 685 38.1 Plus
bel-PB 801 CG9748-PB 279..674 378..781 685 38.1 Plus
CG6418-PB 791 CG6418-PB 249..622 374..774 682 39.4 Plus
CG10077-PC 472 CG10077-PC 139..468 376..730 680 40.7 Plus
Rm62-PK 485 CG10279-PK 120..451 376..731 631 39.5 Plus
Rm62-PL 473 CG10279-PL 120..451 376..731 627 39.2 Plus
Rm62-PM 478 CG10279-PM 120..451 376..731 627 39.2 Plus
Rm62-PJ 458 CG10279-PJ 120..450 376..730 625 39.3 Plus
CG9253-PA 507 CG9253-PA 6..412 337..778 594 33.4 Plus
eIF4A-PF 403 CG9075-PF 31..386 395..783 523 31.3 Plus
eIF4A-PE 403 CG9075-PE 31..386 395..783 523 31.3 Plus
eIF4A-PD 403 CG9075-PD 31..386 395..783 523 31.3 Plus
eIF4A-PB 403 CG9075-PB 31..386 395..783 523 31.3 Plus
eIF4A-PC 403 CG9075-PC 31..386 395..783 523 31.3 Plus
eIF4A-PA 403 CG9075-PA 31..386 395..783 523 31.3 Plus
Rs1-PB 782 CG2173-PB 108..536 332..798 514 31.4 Plus
Rs1-PA 782 CG2173-PA 108..536 332..798 514 31.4 Plus
CG5589-PA 594 CG5589-PA 54..476 325..776 507 30.6 Plus
CG32344-PA 827 CG32344-PA 36..432 391..813 501 30.3 Plus
CG7483-PA 399 CG7483-PA 13..385 381..786 477 30.2 Plus
Dbp45A-PA 521 CG12759-PA 18..353 405..768 458 33.2 Plus
me31B-PB 428 CG4916-PB 36..372 403..774 455 30.4 Plus
me31B-PA 459 CG4916-PA 67..403 403..774 455 30.4 Plus
Hel25E-PB 424 CG7269-PB 11..415 364..797 444 29.2 Plus
Hel25E-PA 424 CG7269-PA 11..415 364..797 444 29.2 Plus
Hel25E-PC 424 CG7269-PC 11..415 364..797 444 29.2 Plus
CG9630-PA 613 CG9630-PA 18..383 405..782 411 30.7 Plus
CG9143-PA 813 CG9143-PA 122..649 326..770 404 26.7 Plus
CG8611-PC 828 CG8611-PC 233..771 312..783 397 27.1 Plus
pit-PC 680 CG6375-PC 134..550 333..782 393 28.1 Plus
pit-PA 680 CG6375-PA 134..550 333..782 393 28.1 Plus
pit-PB 680 CG6375-PB 134..550 333..782 393 28.1 Plus
CG6227-PA 1224 CG6227-PA 7..207 26..239 162 31.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14145-PA 837 GI14145-PA 48..837 28..822 3333 84.9 Plus
Dmoj\GI15175-PA 1229 GI15175-PA 506..928 368..811 854 41.5 Plus
Dmoj\GI12369-PA 794 GI12369-PA 118..522 369..799 825 40.5 Plus
Dmoj\GI12524-PA 602 GI12524-PA 92..467 376..775 775 41.1 Plus
Dmoj\GI13281-PA 649 GI13281-PA 223..602 382..788 769 39.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:51:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19380-PA 437 GL19380-PA 1..437 386..822 2289 97.7 Plus
Dper\GL19379-PA 387 GL19379-PA 71..378 65..372 971 76.1 Plus
Dper\GL14575-PA 1243 GL14575-PA 510..930 368..806 842 40.7 Plus
Dper\GL23489-PA 649 GL23489-PA 188..563 376..775 757 39.9 Plus
Dper\GL16096-PA 554 GL16096-PA 85..478 375..775 745 38.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10248-PA 828 GA10248-PA 71..828 65..822 3350 87.7 Plus
Dpse\GA19457-PA 1243 GA19457-PA 510..930 368..806 838 40.7 Plus
Dpse\GA28589-PA 799 GA28589-PA 124..508 376..785 817 41.5 Plus
Dpse\GA28491-PA 537 GA28491-PA 85..461 375..775 765 40.5 Plus
Dpse\GA13135-PA 619 GA13135-PA 151..534 368..772 754 39.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17282-PA 822 GM17282-PA 1..822 1..822 4283 99 Plus
Dsec\GM20179-PA 1214 GM20179-PA 474..878 368..797 832 41.8 Plus
Dsec\GM11962-PA 946 GM11962-PA 137..601 293..775 765 35.7 Plus
Dsec\GM10578-PA 724 GM10578-PA 268..643 376..775 763 39.9 Plus
Dsec\GM23704-PA 699 GM23704-PA 268..635 389..781 728 40.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:51:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24145-PA 641 GD24145-PA 1..641 182..822 3410 99.8 Plus
Dsim\GD13105-PA 814 GD13105-PA 123..533 363..799 832 40.8 Plus
Dsim\GD16140-PA 800 GD16140-PA 137..601 293..775 763 35.7 Plus
Dsim\GD18514-PA 713 GD18514-PA 282..649 389..781 729 40.5 Plus
Dsim\GD23992-PA 547 GD23992-PA 119..508 382..799 721 38.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17767-PA 835 GJ17767-PA 48..835 28..822 3325 85.1 Plus
Dvir\GJ17053-PA 1244 GJ17053-PA 510..932 368..811 839 41.5 Plus
Dvir\GJ12262-PA 778 GJ12262-PA 117..521 369..799 818 40.7 Plus
Dvir\GJ19487-PA 953 GJ19487-PA 167..601 336..775 780 37.4 Plus
Dvir\GJ16043-PA 605 GJ16043-PA 77..479 341..775 758 39 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:51:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24389-PA 808 GK24389-PA 71..808 93..822 3334 89.4 Plus
Dwil\GK20023-PA 1234 GK20023-PA 510..924 376..811 828 41.7 Plus
Dwil\GK12550-PA 800 GK12550-PA 122..513 382..799 825 41.5 Plus
Dwil\GK14214-PA 745 GK14214-PA 287..662 376..775 770 40.1 Plus
Dwil\GK16276-PA 950 GK16276-PA 168..605 324..775 762 37.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:51:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13195-PA 821 GE13195-PA 1..821 1..822 4230 97.7 Plus
Dyak\GE17181-PA 1215 GE17181-PA 475..879 368..797 845 42.3 Plus
Dyak\GE20460-PA 818 GE20460-PA 138..535 376..799 828 41.6 Plus
Dyak\GE17497-PA 962 GE17497-PA 166..602 324..775 760 37.4 Plus
Dyak\GE24123-PA 719 GE24123-PA 266..641 376..775 758 39.7 Plus

RH55640.hyp Sequence

Translation from 91 to 2559

> RH55640.hyp
MVNDKKRRSRSRERHREDRPAVGNPRDRERERDRVRERDRQFDREKERRQ
RRSRSREDRNRRRSPERQRPRDNVRERSRERGGGAGGGGGGGAEKKAKMD
TGDAPPKPLIVDDEEQQDGKEAKVKKEPLSLEELLDKKKREEEARSKPVF
LTKEQRALEAIKRRQEEVERQRAAHDAAREQMAAASKVSISMGTAMASGA
PPPAIVAPPPKPDRRERGGGRDRGDRIDRGERGDDKRAEDLTHKDKEKEL
EAIRERYLGIIKKKRRVRRLNDRKFVFDWDAGEDTSIDYNNLYKERHHVQ
FFGRGNVAGIDIKEQKRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKE
DKQKWDDRHWSEKENDEMTERDWRIFREDYNVTIKGGRIPNPIRSWNESG
FPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLI
PLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQPLGI
RTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIV
LDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKK
YRQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVYMMGE
NDKRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGK
GQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDY
THRIGRTGRAGKTGCAISFVTKDDSALFYDLKQCVSASPVSTCPPELMNH
PEAQHKPGTVVTKKRREEKIFA*

RH55640.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:59:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG10333-PA 822 CG10333-PA 1..822 1..822 4254 100 Plus
CG6227-PA 1224 CG6227-PA 82..879 3..788 879 30.3 Plus
CG10077-PD 818 CG10077-PD 139..536 376..799 817 41.6 Plus
CG10077-PA 818 CG10077-PA 139..536 376..799 817 41.6 Plus
Rm62-PH 575 CG10279-PH 120..495 376..775 739 39.9 Plus
CG6227-PA 1224 CG6227-PA 7..207 26..239 162 31.7 Plus