BDGP Sequence Production Resources |
Search the DGRC for RH57268
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 572 |
Well: | 68 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG5934-RA |
Protein status: | RH57268.pep: gold |
Preliminary Size: | 512 |
Sequenced Size: | 800 |
Gene | Date | Evidence |
---|---|---|
CG5934 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5934 | 2002-02-22 | Blastp of sequenced clone |
CG5934 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5934 | 2008-04-29 | Release 5.5 accounting |
CG5934 | 2008-08-15 | Release 5.9 accounting |
CG5934 | 2008-12-18 | 5.12 accounting |
800 bp (800 high quality bases) assembled on 2002-02-22
GenBank Submission: AY084197
> RH57268.complete GAGCTAGTGTTGGCCAACTTCCCAAAGGGTAGTTTTATTTTCGTGTCAAT TGTTAAGAGAAATTTGGCAAAAGTGAATAGAGTTTAAGTTTTATAGAATA AAGAGTACCCCTGAACACTGCCAGCCATGTCCCTGTTAAACAATGACGAC AGCATTCCCAACATGGACGAGGATCCACAGGTGGTCATTCCGGACGACGA GCCACCGGCGACGGGACGAATGCCCAGTGGGAGGTCCATGGACTCGTTGC GTTCATCGTTCACCAACCGCAGTTCCACGCCAGATTCATCGCACAATTCG CTGGAGGCCATGGAAATGGCCCAGGACGATCGGGAGGAGAAGGCCCGCCT CATCACACAGGTCCTGGAGCTGCAGAACACCCTGGACGACCTGTCGCAAC GCGTCGATTCCGTCAAGGAGGAAAATCTGAAGCTGCGCTCCGAGAACCAG GTGCTCGGCCAGTACATCGAGAACCTGATGTCGGCCTCATCGGTGTTCCA GTCCACCAGTCCCAGTGCGGCCAAAAAGAAGTAATCTTCTATAGTCAATC GACCCACCGGTACTGGAAACCAAAAACCTTCTCAAATATGCCTTCTCGTT CACGCTAGAGCTACATGTATATTTTAATCTGTAACACTCGAAATTAAGCT ATTGCAATGTTATTTCAGTTGCCCGATTGTCGAATTTGTATTTGTTTAGG CTTAAGCTTATGGCGCGCTATGTATTTTATACATAGAAGTAATTAATTTA TATAGATAATTAATAAATCAATAATACCCCACGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5934-RA | 875 | CG5934-RA | 65..849 | 2..786 | 3925 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 4531..4580 | 725..776 | 111 | 71.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 23096635..23096816 | 1..181 | 99 | -> | Plus |
chr3R | 23096894..23097451 | 182..739 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5934-RA | 1..408 | 127..534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5934-RA | 1..408 | 127..534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5934-RA | 1..408 | 127..534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5934-RA | 1..408 | 127..534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5934-RA | 1..408 | 127..534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5934-RA | 1..785 | 1..784 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5934-RA | 1..785 | 1..784 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5934-RA | 2..784 | 2..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5934-RA | 1..785 | 1..784 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5934-RA | 2..784 | 2..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27273704..27273885 | 1..181 | 99 | -> | Plus |
3R | 27273963..27274565 | 182..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27273704..27273885 | 1..181 | 99 | -> | Plus |
3R | 27273963..27274565 | 182..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27273704..27273885 | 1..181 | 99 | -> | Plus |
3R | 27273963..27274565 | 182..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 23099426..23099607 | 1..181 | 99 | -> | Plus |
arm_3R | 23099685..23100287 | 182..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27014794..27015396 | 182..784 | 100 | Plus | |
3R | 27014535..27014716 | 1..181 | 99 | -> | Plus |
Translation from 126 to 533
> RH57268.pep MSLLNNDDSIPNMDEDPQVVIPDDEPPATGRMPSGRSMDSLRSSFTNRSS TPDSSHNSLEAMEMAQDDREEKARLITQVLELQNTLDDLSQRVDSVKEEN LKLRSENQVLGQYIENLMSASSVFQSTSPSAAKKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16281-PA | 135 | GF16281-PA | 1..135 | 1..135 | 634 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11541-PA | 135 | GG11541-PA | 1..135 | 1..135 | 689 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19516-PA | 135 | GH19516-PA | 1..135 | 1..135 | 542 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5934-PA | 135 | CG5934-PA | 1..135 | 1..135 | 671 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22257-PA | 135 | GI22257-PA | 1..135 | 1..135 | 552 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24486-PA | 135 | GL24486-PA | 1..135 | 1..135 | 591 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19242-PA | 135 | GA19242-PA | 1..135 | 1..135 | 594 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10383-PA | 135 | GM10383-PA | 1..135 | 1..135 | 689 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15135-PA | 135 | GD15135-PA | 1..135 | 1..135 | 689 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24048-PA | 135 | GJ24048-PA | 1..135 | 1..135 | 548 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22576-PA | 136 | GK22576-PA | 1..136 | 1..135 | 578 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23729-PA | 135 | GE23729-PA | 1..135 | 1..135 | 689 | 100 | Plus |
Translation from 126 to 533
> RH57268.hyp MSLLNNDDSIPNMDEDPQVVIPDDEPPATGRMPSGRSMDSLRSSFTNRSS TPDSSHNSLEAMEMAQDDREEKARLITQVLELQNTLDDLSQRVDSVKEEN LKLRSENQVLGQYIENLMSASSVFQSTSPSAAKKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5934-PA | 135 | CG5934-PA | 1..135 | 1..135 | 671 | 100 | Plus |