BDGP Sequence Production Resources |
Search the DGRC for RH57501
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 575 |
Well: | 1 |
Vector: | pFlc-1 |
Associated Gene/Transcript | RpS21-RA |
Protein status: | RH57501.pep: gold |
Sequenced Size: | 406 |
Gene | Date | Evidence |
---|---|---|
CG2986 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2986 | 2004-07-15 | Blastp of sequenced clone |
oho23B | 2008-04-29 | Release 5.5 accounting |
oho23B | 2008-08-15 | Release 5.9 accounting |
oho23B | 2008-12-18 | 5.12 accounting |
406 bp (406 high quality bases) assembled on 2004-07-15
GenBank Submission: BT015189
> RH57501.complete GCTTTCTCTTTTTCGCCTTCACCGACGAGTTGCGGTCGCTAGATTTGTAA ATTTCTACAAAAAACCCAATAAAATGGAGAACGACGCCGGTGAGAATGTT GATCTGTACGTGCCCCGCAAATGCTCGGCGTCCAACAGGATCATCCACGC CAAGGATCACGCCTCCGTGCAGCTGAGCATCGTGGATGTGGACCCCGAGA CCGGTCGCCAGACCGACGGTTCCAAGACCTACGCCATCTGCGGCGAGATC CGTCGCATGGGCGAGTCCGACGACTGCATCGTGCGTCTGGCCAAGAAGGA CGGCATCATTACCAAGAACTTCTAAGCGTGGCGTACCCATAGCTAGATTT TGATTTGGTAATAAAGCGATTTCCCTTTGTAATTTAACGTAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
oho23B.a | 458 | oho23B.a | 131..457 | 65..391 | 1635 | 100 | Plus |
oho23B.b | 462 | oho23B.b | 135..461 | 65..391 | 1635 | 100 | Plus |
oho23B-RE | 501 | oho23B-RE | 47..361 | 2..316 | 1575 | 100 | Plus |
oho23B-RE | 501 | oho23B-RE | 423..498 | 316..391 | 380 | 100 | Plus |
oho23B.a | 458 | oho23B.a | 44..107 | 2..65 | 320 | 100 | Plus |
oho23B.b | 462 | oho23B.b | 44..107 | 2..65 | 320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 2856052..2856245 | 123..316 | 970 | 100 | Plus |
chr2L | 23010047 | chr2L | 2855789..2855851 | 2..64 | 315 | 100 | Plus |
chr2L | 23010047 | chr2L | 2855923..2855981 | 65..123 | 295 | 100 | Plus |
chr2L | 23010047 | chr2L | 2856317..2856374 | 333..390 | 290 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2856376..2856569 | 123..316 | 970 | 100 | Plus |
2L | 23513712 | 2L | 2856631..2856706 | 316..391 | 380 | 100 | Plus |
2L | 23513712 | 2L | 2856113..2856175 | 2..64 | 315 | 100 | Plus |
2L | 23513712 | 2L | 2856247..2856305 | 65..123 | 295 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2856376..2856569 | 123..316 | 970 | 100 | Plus |
2L | 23513712 | 2L | 2856631..2856706 | 316..391 | 380 | 100 | Plus |
2L | 23513712 | 2L | 2856113..2856175 | 2..64 | 315 | 100 | Plus |
2L | 23513712 | 2L | 2856247..2856305 | 65..123 | 295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2855788..2855851 | 1..64 | 98 | -> | Plus |
chr2L | 2855923..2855981 | 65..123 | 100 | -> | Plus |
chr2L | 2856053..2856244 | 124..315 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
oho23B-RB | 1..252 | 74..325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
oho23B-RB | 1..252 | 74..325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS21-RA | 1..252 | 74..325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
oho23B-RB | 1..252 | 74..325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS21-RA | 1..252 | 74..325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
oho23B-RA | 43..432 | 1..390 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
oho23B-RA | 43..432 | 1..390 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS21-RF | 2..391 | 1..390 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
oho23B-RA | 43..432 | 1..390 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS21-RF | 2..391 | 1..390 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2856631..2856705 | 316..390 | 100 | Plus | |
2L | 2856112..2856175 | 1..64 | 98 | -> | Plus |
2L | 2856247..2856305 | 65..123 | 100 | -> | Plus |
2L | 2856377..2856568 | 124..315 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2856631..2856705 | 316..390 | 100 | Plus | |
2L | 2856112..2856175 | 1..64 | 98 | -> | Plus |
2L | 2856247..2856305 | 65..123 | 100 | -> | Plus |
2L | 2856377..2856568 | 124..315 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2856631..2856705 | 316..390 | 100 | Plus | |
2L | 2856112..2856175 | 1..64 | 98 | -> | Plus |
2L | 2856247..2856305 | 65..123 | 100 | -> | Plus |
2L | 2856377..2856568 | 124..315 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2856112..2856175 | 1..64 | 98 | -> | Plus |
arm_2L | 2856247..2856305 | 65..123 | 100 | -> | Plus |
arm_2L | 2856377..2856568 | 124..315 | 100 | -> | Plus |
arm_2L | 2856631..2856705 | 316..390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2856112..2856175 | 1..64 | 98 | -> | Plus |
2L | 2856247..2856305 | 65..123 | 100 | -> | Plus |
2L | 2856377..2856568 | 124..315 | 100 | -> | Plus |
2L | 2856631..2856705 | 316..390 | 100 | Plus |
Translation from 0 to 324
> RH57501.hyp LSLFRLHRRVAVARFVNFYKKPNKMENDAGENVDLYVPRKCSASNRIIHA KDHASVQLSIVDVDPETGRQTDGSKTYAICGEIRRMGESDDCIVRLAKKD GIITKNF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS21-PD | 83 | CG2986-PD | 1..83 | 25..107 | 432 | 100 | Plus |
RpS21-PB | 83 | CG2986-PB | 1..83 | 25..107 | 432 | 100 | Plus |
RpS21-PA | 83 | CG2986-PA | 1..83 | 25..107 | 432 | 100 | Plus |
RpS21-PF | 83 | CG2986-PF | 1..83 | 25..107 | 432 | 100 | Plus |
RpS21-PE | 81 | CG2986-PE | 1..81 | 25..105 | 420 | 100 | Plus |
Translation from 73 to 324
> RH57501.pep MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGS KTYAICGEIRRMGESDDCIVRLAKKDGIITKNF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14986-PA | 83 | GF14986-PA | 1..83 | 1..83 | 434 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24892-PA | 83 | GG24892-PA | 1..83 | 1..83 | 436 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH25136-PA | 81 | GH25136-PA | 1..81 | 1..81 | 409 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS21-PD | 83 | CG2986-PD | 1..83 | 1..83 | 432 | 100 | Plus |
RpS21-PB | 83 | CG2986-PB | 1..83 | 1..83 | 432 | 100 | Plus |
RpS21-PA | 83 | CG2986-PA | 1..83 | 1..83 | 432 | 100 | Plus |
RpS21-PF | 83 | CG2986-PF | 1..83 | 1..83 | 432 | 100 | Plus |
RpS21-PE | 81 | CG2986-PE | 1..81 | 1..81 | 420 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19989-PA | 83 | GI19989-PA | 1..83 | 1..83 | 423 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26288-PA | 83 | GL26288-PA | 1..83 | 1..83 | 434 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15559-PA | 83 | GA15559-PA | 1..83 | 1..83 | 434 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18373-PA | 83 | GM18373-PA | 1..83 | 1..83 | 436 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23188-PA | 83 | GD23188-PA | 1..83 | 1..83 | 434 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13417-PA | 81 | GJ13417-PA | 1..81 | 1..81 | 409 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24281-PA | 83 | GK24281-PA | 1..83 | 1..83 | 434 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18186-PA | 83 | GE18186-PA | 1..83 | 1..83 | 436 | 100 | Plus |