BDGP Sequence Production Resources |
Search the DGRC for RH57745
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 577 |
Well: | 45 |
Vector: | pFlc-1 |
Associated Gene/Transcript | mRpL21-RA |
Protein status: | RH57745.pep: gold |
Preliminary Size: | 591 |
Sequenced Size: | 754 |
Gene | Date | Evidence |
---|---|---|
CG9730 | 2002-01-01 | Sim4 clustering to Release 2 |
754 bp assembled on 2011-07-21
GenBank Submission: BT128761.1
> RH57745.complete ATTCACATTTTGCCTATCTGCCGACATTAAACCGATCCGATTTATTTATG TACTTTTGAGTTAAAAACAAAGCCAAACGATGTCCTTTCTAGCGCAAACT ATGCGTCAAATGCTACGCCACGTGCCCAATCGCAGTTTGTTGACGGCAGG TGCCATGCGTCCACTGAGCATATCGCCGGTAATTGGGCAGCAAAACAAGC CGGCGACGGAATCGGTGGATTTATCGGCCATAGCTAAGGATCAGCAGAAG GAGTGCCTGAGCATCTGCGAGCGCATCAACCGGCAGGTGCAAAAATCCGA GCAGGGACGACTCTTCGCGGTTGTCCACCTGTGCGGCAAGCAATTTAAAG TAACTCCAGGAGATATCATCCTGGTGGAGGGATACTGGCCGCCAACGATA GGCGACGAGATCAGCCTGGATAAGGTGCTCCTGGCCGGTGCCCGCGACTT CACGCTCGTGGGAAGGCCCATTTTGGAGCCCGGACTCATCTTGGTGAAGG CCACCGTCGTGGAGAAGACGCTCAGCCACACGAAGACGCACTTTAGGAAG AAGCGCAGGAAGCAGTACATGCGCATCAACTTCCAGAGATCTCCGCACAC CATGGTCCGGATCAATTCAATTGAACTGGCTCGTCCAGTGGACGGGAATG GCGAGGGGGAGTCTTCCTCGAGGCGCTTGTTTTAGTTTAAAATGCTGTTG ATCACGAAAAATAAACCAAGTTTTTGGAAGGTAATTAAGAAAAAAAAAAA AAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19243707..19244296 | 150..739 | 100 | <- | Minus |
chr3L | 19244373..19244521 | 1..149 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL21-RA | 1..606 | 80..685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL21-RA | 1..606 | 80..685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL21-RA | 1..606 | 80..685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL21-RA | 1..738 | 2..739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL21-RA | 4..742 | 1..739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL21-RA | 4..742 | 1..739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19254244..19254833 | 150..739 | 100 | <- | Minus |
3L | 19254910..19255058 | 1..149 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19254244..19254833 | 150..739 | 100 | <- | Minus |
3L | 19254910..19255058 | 1..149 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19254244..19254833 | 150..739 | 100 | <- | Minus |
3L | 19254910..19255058 | 1..149 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19247344..19247933 | 150..739 | 100 | <- | Minus |
arm_3L | 19248010..19248158 | 1..149 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19247344..19247933 | 150..739 | 100 | <- | Minus |
3L | 19248010..19248158 | 1..149 | 100 | Minus |
Translation from 79 to 684
> RH57745.pep MSFLAQTMRQMLRHVPNRSLLTAGAMRPLSISPVIGQQNKPATESVDLSA IAKDQQKECLSICERINRQVQKSEQGRLFAVVHLCGKQFKVTPGDIILVE GYWPPTIGDEISLDKVLLAGARDFTLVGRPILEPGLILVKATVVEKTLSH TKTHFRKKRRKQYMRINFQRSPHTMVRINSIELARPVDGNGEGESSSRRL F*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10776-PA | 202 | GF10776-PA | 1..202 | 1..201 | 899 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13419-PA | 201 | GG13419-PA | 1..201 | 1..201 | 1023 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16735-PA | 199 | GH16735-PA | 1..199 | 1..201 | 815 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL21-PB | 201 | CG9730-PB | 1..201 | 1..201 | 1022 | 100 | Plus |
mRpL21-PC | 201 | CG9730-PC | 1..201 | 1..201 | 1022 | 100 | Plus |
mRpL21-PA | 201 | CG9730-PA | 1..201 | 1..201 | 1022 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13461-PA | 199 | GI13461-PA | 1..199 | 1..201 | 836 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20915-PA | 204 | GL20915-PA | 1..204 | 1..201 | 817 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21992-PA | 204 | GA21992-PA | 1..204 | 1..201 | 814 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14887-PA | 201 | GM14887-PA | 1..201 | 1..201 | 1047 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12295-PA | 114 | GD12295-PA | 1..97 | 1..97 | 450 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11824-PA | 201 | GJ11824-PA | 1..201 | 1..201 | 838 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12457-PA | 208 | GK12457-PA | 1..208 | 1..201 | 776 | 72.1 | Plus |
Translation from 79 to 684
> RH57745.hyp MSFLAQTMRQMLRHVPNRSLLTAGAMRPLSISPVIGQQNKPATESVDLSA IAKDQQKECLSICERINRQVQKSEQGRLFAVVHLCGKQFKVTPGDIILVE GYWPPTIGDEISLDKVLLAGARDFTLVGRPILEPGLILVKATVVEKTLSH TKTHFRKKRRKQYMRINFQRSPHTMVRINSIELARPVDGNGEGESSSRRL F*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL21-PB | 201 | CG9730-PB | 1..201 | 1..201 | 1022 | 100 | Plus |
mRpL21-PC | 201 | CG9730-PC | 1..201 | 1..201 | 1022 | 100 | Plus |
mRpL21-PA | 201 | CG9730-PA | 1..201 | 1..201 | 1022 | 100 | Plus |