BDGP Sequence Production Resources |
Search the DGRC for RH58379
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 583 |
Well: | 79 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG8360-RA |
Protein status: | RH58379.pep: gold |
Preliminary Size: | 709 |
Sequenced Size: | 650 |
Gene | Date | Evidence |
---|---|---|
CG8360 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8360 | 2003-02-13 | Blastp of sequenced clone |
CG8360 | 2008-04-29 | Release 5.5 accounting |
CG8360 | 2008-08-15 | Release 5.9 accounting |
CG8360 | 2008-12-18 | 5.12 accounting |
650 bp (650 high quality bases) assembled on 2003-02-13
GenBank Submission: BT011046
> RH58379.complete GATTCATTAACAATCGCTTGGCCATGACACAGGTGTTTATCAATGGTGCC AGAGACGATCTCAATGTACGGGAATTCCAGAGCCTGGATCCTTCGATTCA AGAGATCATCCTGGCAGCCACGGAAGCCAGAAAACAGGCTTATTGTCCGT ACAGTAACTTTGCCGTAGGAGCCGCCCTGAGGACCAGCGATGGCACCATA TACTCCGGTTGCAACATCGAAAACGGGGCGTATGCCACCTGCATTTGTGC AGAGCGCACTGCAGCCGTCAAGGCCATCAGTGAAGGCAAACGCGACTTTG TGGCTTGTGCAGTGGTGGCCCAGCAGGATAATGGCTTCACCACGCCTTGT GGCGTCTGCCGGCAGTTCCTCTCGGAGTTCGTCAACGGCAAGGACATCCC CCTGTACGCCGCCAAGCCGACCAATCTTCCATTGAGGGTGCTCTGCACCA GCGTTCTCCAACTGCTGCCCAACGGCTTTAGCTTCGCCAACGGAAAATAG AAAAGAATATCCCAGCCCAGCCCAGCCGGACAGGGTGCAATCCATGTGCA ATAGTTTATGTGACATCCCATTTATAATGTTCTGTAAACCCACCCCTCGT TATTTGTTGATTGAATAGCTTATACGAGATACGGCAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8212758..8213115 | 278..635 | 1790 | 100 | Plus |
chr2L | 23010047 | chr2L | 8212316..8212509 | 87..280 | 970 | 100 | Plus |
chr2L | 23010047 | chr2L | 8212177..8212262 | 2..87 | 430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8212317..8212509 | 88..280 | 100 | -> | Plus |
chr2L | 8212761..8213115 | 281..635 | 100 | Plus | |
chr2L | 8212176..8212262 | 1..87 | 98 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8360-RA | 1..477 | 24..500 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8360-RA | 1..477 | 24..500 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8360-RA | 1..477 | 24..500 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8360-RA | 1..477 | 24..500 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8360-RA | 1..477 | 24..500 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8360-RA | 18..651 | 1..634 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8360-RA | 18..652 | 1..635 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8360-RA | 80..714 | 1..635 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8360-RA | 18..651 | 1..634 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8360-RA | 80..714 | 1..635 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8213196..8213282 | 1..87 | 98 | -> | Plus |
2L | 8213337..8213529 | 88..280 | 100 | -> | Plus |
2L | 8213781..8214135 | 281..635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8213196..8213282 | 1..87 | 98 | -> | Plus |
2L | 8213337..8213529 | 88..280 | 100 | -> | Plus |
2L | 8213781..8214135 | 281..635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8213196..8213282 | 1..87 | 98 | -> | Plus |
2L | 8213337..8213529 | 88..280 | 100 | -> | Plus |
2L | 8213781..8214135 | 281..635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8213196..8213282 | 1..87 | 98 | -> | Plus |
arm_2L | 8213337..8213529 | 88..280 | 100 | -> | Plus |
arm_2L | 8213781..8214135 | 281..635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8213781..8214135 | 281..635 | 100 | Plus | |
2L | 8213196..8213282 | 1..87 | 98 | -> | Plus |
2L | 8213337..8213529 | 88..280 | 100 | -> | Plus |
Translation from 2 to 499
> RH58379.hyp FINNRLAMTQVFINGARDDLNVREFQSLDPSIQEIILAATEARKQAYCPY SNFAVGAALRTSDGTIYSGCNIENGAYATCICAERTAAVKAISEGKRDFV ACAVVAQQDNGFTTPCGVCRQFLSEFVNGKDIPLYAAKPTNLPLRVLCTS VLQLLPNGFSFANGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8360-PC | 158 | CG8360-PC | 1..158 | 8..165 | 822 | 100 | Plus |
CG8360-PA | 158 | CG8360-PA | 1..158 | 8..165 | 822 | 100 | Plus |
CG8353-PB | 170 | CG8353-PB | 1..165 | 8..159 | 379 | 49.4 | Plus |
CG8353-PA | 170 | CG8353-PA | 1..165 | 8..159 | 379 | 49.4 | Plus |
CG8349-PA | 264 | CG8349-PA | 124..261 | 33..160 | 317 | 50.4 | Plus |
Translation from 23 to 499
> RH58379.pep MTQVFINGARDDLNVREFQSLDPSIQEIILAATEARKQAYCPYSNFAVGA ALRTSDGTIYSGCNIENGAYATCICAERTAAVKAISEGKRDFVACAVVAQ QDNGFTTPCGVCRQFLSEFVNGKDIPLYAAKPTNLPLRVLCTSVLQLLPN GFSFANGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15273-PA | 158 | GF15273-PA | 1..158 | 1..158 | 794 | 94.9 | Plus |
Dana\GF15274-PA | 170 | GF15274-PA | 20..165 | 18..152 | 343 | 49 | Plus |
Dana\GF15275-PA | 264 | GF15275-PA | 116..261 | 18..153 | 322 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10525-PA | 158 | GG10525-PA | 1..158 | 1..158 | 810 | 96.8 | Plus |
Dere\GG10526-PA | 170 | GG10526-PA | 1..165 | 1..152 | 387 | 50 | Plus |
Dere\GG10527-PA | 264 | GG10527-PA | 124..261 | 26..153 | 324 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11513-PA | 159 | GH11513-PA | 1..159 | 1..158 | 675 | 83.6 | Plus |
Dgri\GH11514-PA | 168 | GH11514-PA | 16..165 | 14..152 | 351 | 48.7 | Plus |
Dgri\GH11515-PA | 221 | GH11515-PA | 76..218 | 18..152 | 305 | 47.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8360-PC | 158 | CG8360-PC | 1..158 | 1..158 | 822 | 100 | Plus |
CG8360-PA | 158 | CG8360-PA | 1..158 | 1..158 | 822 | 100 | Plus |
CG8353-PB | 170 | CG8353-PB | 1..165 | 1..152 | 379 | 49.4 | Plus |
CG8353-PA | 170 | CG8353-PA | 1..165 | 1..152 | 379 | 49.4 | Plus |
CG8349-PA | 264 | CG8349-PA | 124..261 | 26..153 | 317 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17009-PA | 159 | GI17009-PA | 1..159 | 1..158 | 694 | 83.6 | Plus |
Dmoj\GI17010-PA | 173 | GI17010-PA | 20..169 | 18..152 | 333 | 44 | Plus |
Dmoj\GI17011-PA | 220 | GI17011-PA | 76..219 | 18..153 | 331 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18729-PA | 158 | GL18729-PA | 1..158 | 1..158 | 755 | 89.9 | Plus |
Dper\GL18730-PA | 170 | GL18730-PA | 1..165 | 1..152 | 374 | 48.2 | Plus |
Dper\GL18731-PA | 227 | GL18731-PA | 82..224 | 21..153 | 317 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21017-PA | 158 | GA21017-PA | 1..158 | 1..158 | 755 | 89.9 | Plus |
Dpse\GA21012-PA | 170 | GA21012-PA | 1..165 | 1..152 | 379 | 48.8 | Plus |
Dpse\GA21010-PA | 227 | GA21010-PA | 82..224 | 21..153 | 321 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16857-PA | 158 | GM16857-PA | 1..158 | 1..158 | 815 | 98.1 | Plus |
Dsec\GM16858-PA | 170 | GM16858-PA | 1..165 | 1..152 | 390 | 50.6 | Plus |
Dsec\GM16862-PA | 264 | GM16862-PA | 124..261 | 26..153 | 324 | 51.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23515-PA | 158 | GD23515-PA | 1..158 | 1..158 | 827 | 99.4 | Plus |
Dsim\GD23516-PA | 170 | GD23516-PA | 1..165 | 1..152 | 388 | 50.6 | Plus |
Dsim\GD23517-PA | 264 | GD23517-PA | 124..261 | 26..153 | 327 | 51.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24345-PA | 159 | GJ24345-PA | 1..159 | 1..158 | 716 | 85.5 | Plus |
Dvir\GJ24356-PA | 167 | GJ24356-PA | 16..165 | 14..153 | 329 | 46.7 | Plus |
Dvir\GJ24367-PA | 221 | GJ24367-PA | 76..219 | 18..153 | 328 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15159-PA | 170 | GK15159-PA | 1..165 | 1..152 | 342 | 46.4 | Plus |
Dwil\GK15160-PA | 216 | GK15160-PA | 61..215 | 12..158 | 322 | 46.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18745-PA | 158 | GE18745-PA | 1..158 | 1..158 | 823 | 98.7 | Plus |
Dyak\GE18746-PA | 170 | GE18746-PA | 1..165 | 1..152 | 392 | 50.6 | Plus |
Dyak\GE18747-PA | 264 | GE18747-PA | 124..261 | 26..153 | 315 | 51.8 | Plus |