BDGP Sequence Production Resources |
Search the DGRC for RH59152
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 591 |
Well: | 52 |
Vector: | pFlc-1 |
Associated Gene/Transcript | l(1)G0334-RC |
Protein status: | RH59152.pep: gold |
Sequenced Size: | 2050 |
Gene | Date | Evidence |
---|---|---|
l(1)G0334-RC | 2010-11-11 | Gleaning Pick By Joe Carlson |
2050 bp assembled on 2011-01-03
GenBank Submission: BT125990.1
> RH59152.complete GATACGGTTGTTATGGTTGTGCAATATAGTAGTTGATAAACTAATCTCGC TACCTTTTTTTCCGATTGTTTAACTTACAACGACGCGCGGCGGTGCGACT GAGACACCAGATATATAGCGTGCGATTCTAGATCCGGACAATCCGCATAT AGAAAGCCCCCATTCACATCCAATTTCTGTCAGTCGAACGAGAATAACAC AGCGAAAATGTTGCGTACTCTGTCACGCGTTAGCGAATTGCCCATTATTG TTAAGCAACTGCAAAAACGTTGCCATAACAACAACAACAACAACATCATC ATCAGCGGATGTCGGATACTTAGCAACAACAACAACAACAGCAGCATCGA TATCATCAGGAATGGGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGA ATGCAGCCCAAGCAGGTGTTTCGAAAACCAACAATTATGCCACGGAGGCC ACCGTTCAAGTGAATCGGCCCTTCAAGCTGCACCGCCTGGACGAAGGACC CGCCACGGAAGTGAAGCTGACCAAGGATCAGGCCCTCAAGTACTACACAC AGATGCAGACGATCCGTCGGTTGGAGACGGCCGCCGGTAATCTGTACAAG GAGAAGATCATTCGCGGCTTCTGTCATCTGTATTCCGGCCAGGAGGCATG CGCCGTTGGCATGAAGGCGGCGATGCGGGATGTGGACAACATCATCTCGG CGTACCGTGTCCACGGATGGACCTACCTGATGGGCGTCTCACCCAGCGGC GTACTGGCTGAGCTCACCGGTGTCCAGGGTGGCTGTGCCCGCGGCAAGGG TGGCTCCATGCACATGTACGCACCGAACTTCTACGGAGGCAATGGCATCG TGGGTGCTCAAGTTCCTTTGGGTGCCGGCGTTGGCTTGGCCTGCAAGTAC AAGGGCAATGGCGGCATGTGCCTGGCCCTCTACGGTGATGGTGCCGCCAA TCAAGGACAGGTGTTCGAGGCTTACAACATGGCCTACCTGTGGAAACTGC CTGTGATCTTTGTCTGCGAGAACAACAACTACGGAATGGGCACCAGTTCT GAGCGTGCTTCCTGCAACACTGATTACTATACCCGCGGCGACGCTCTGCC CGGAATCTGGGTGGACGGCATGGATGTGCTGGCCGTGCGCAGCGCCACCG AGTTCGCCATCAACTATGTGAACACTCACGGACCTTTGGTGATGGAGACG AACACGTACCGATACTCTGGACACTCCATGTCCGATCCGGGCACATCGTA CCGCACACGCGAGGAGATCCAGGAGGTGCGCCAGAAGCGTGATCCCATCA CCTCCTTCAAGGAGCTGTGCATCGAGCTGGGTCTGATTACCACCGATGAA GTTAAGGCCATCGATCTGAAGGTACGCAAGGAGGTCGACGAGGCCACCGC CTTCGCCAAGTCCGATGCCGAGCTGGGCGTGAGCCACCTCTGGACGGACG TGTACTCCAACAATCTGGAGCCCAAGCTGCGCGGCACCATCGCCTACGAT ATTGATCACATCCAGGAGCGCAAGGGCGTCAATCACTAAGTCATCGGGCC AACGAATCTGATTCGGGAACTCACAAGAACCTTAAACGAAACAAGAAAAC CGAACAGCAAACACAAATCACTGACAGACAGACAAGAAGACACAATAACT CAGAAACTTGGACACAAGCGAAATCTCTAGATCATAAGCCGAAAGTTGAA CGATGAGAACCCCGTAGAACGGAACGGATCCGAAGAGACCCACAAAAAGC TTAGCTAATCGGAGCACTCCAACCACACATCGTAGCGCACCACATAACTC TGGGGTACTGCATTGGATATTATATTGCGAACGTGTTCAATAAGGATAAA GCGAGGTGTAAATTGTTGAAAATATAAAAATCTAGAAAAATTAATCCAAA TTAGTTTTCTTAACAAAAGTGAATCAAGTATGTACTTTTGAAATGTGAAA ATCTCAGTCTGTTTCACCTATACTTGCACTATAGAATTTTGATAGATTTA TAAGATATTAATAAACGGAATAGATTTAATAGATAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 4597369..4598053 | 1355..2034 | 3315 | 99.3 | Plus |
chrX | 22417052 | chrX | 4596337..4596903 | 468..1034 | 2760 | 99.1 | Plus |
chrX | 22417052 | chrX | 4596977..4597301 | 1033..1357 | 1610 | 99.7 | Plus |
chrX | 22417052 | chrX | 4595116..4595380 | 4..267 | 1260 | 99.2 | Plus |
chrX | 22417052 | chrX | 4595476..4595675 | 263..468 | 890 | 96.6 | Plus |
chrX | 22417052 | chrX | 4599247..4599578 | 923..1254 | 265 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 4704586..4705267 | 1355..2036 | 3410 | 100 | Plus |
X | 23542271 | X | 4703554..4704120 | 468..1034 | 2835 | 100 | Plus |
X | 23542271 | X | 4704194..4704518 | 1033..1357 | 1625 | 100 | Plus |
X | 23542271 | X | 4702328..4702591 | 4..267 | 1305 | 99.6 | Plus |
X | 23542271 | X | 4702687..4702892 | 263..468 | 1015 | 99.5 | Plus |
X | 23542271 | X | 4706459..4706790 | 923..1254 | 265 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 4712684..4713365 | 1355..2036 | 3410 | 100 | Plus |
X | 23527363 | X | 4711652..4712218 | 468..1034 | 2835 | 100 | Plus |
X | 23527363 | X | 4712292..4712616 | 1033..1357 | 1625 | 100 | Plus |
X | 23527363 | X | 4710426..4710689 | 4..267 | 1305 | 99.6 | Plus |
X | 23527363 | X | 4710785..4710990 | 263..468 | 1015 | 99.5 | Plus |
X | 23527363 | X | 4714557..4714627 | 923..993 | 160 | 81.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 4596978..4597300 | 1034..1356 | 99 | -> | Plus |
chrX | 4595113..4595380 | 1..267 | 98 | == | Plus |
chrX | 4595566..4595675 | 359..468 | 100 | -> | Plus |
chrX | 4596338..4596902 | 469..1033 | 99 | -> | Plus |
chrX | 4597371..4598053 | 1357..2034 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RC | 1..1332 | 208..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RC | 1..1332 | 208..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RC | 1..1332 | 208..1539 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RC | 1..1854 | 39..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RC | 2..2034 | 2..2034 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0334-RC | 2..2034 | 2..2034 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4702325..4702591 | 1..267 | 98 | -> | Plus |
X | 4702692..4702892 | 268..468 | 100 | -> | Plus |
X | 4703555..4704119 | 469..1033 | 100 | -> | Plus |
X | 4704195..4704517 | 1034..1356 | 100 | -> | Plus |
X | 4704588..4705265 | 1357..2034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4702325..4702591 | 1..267 | 98 | -> | Plus |
X | 4702692..4702892 | 268..468 | 100 | -> | Plus |
X | 4703555..4704119 | 469..1033 | 100 | -> | Plus |
X | 4704195..4704517 | 1034..1356 | 100 | -> | Plus |
X | 4704588..4705265 | 1357..2034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4702325..4702591 | 1..267 | 98 | -> | Plus |
X | 4702692..4702892 | 268..468 | 100 | -> | Plus |
X | 4703555..4704119 | 469..1033 | 100 | -> | Plus |
X | 4704195..4704517 | 1034..1356 | 100 | -> | Plus |
X | 4704588..4705265 | 1357..2034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 4596725..4596925 | 268..468 | 100 | -> | Plus |
arm_X | 4596358..4596624 | 1..267 | 98 | -> | Plus |
arm_X | 4597588..4598152 | 469..1033 | 100 | -> | Plus |
arm_X | 4598228..4598550 | 1034..1356 | 100 | -> | Plus |
arm_X | 4598621..4599298 | 1357..2034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4710423..4710689 | 1..267 | 98 | -> | Plus |
X | 4710790..4710990 | 268..468 | 100 | -> | Plus |
X | 4711653..4712217 | 469..1033 | 100 | -> | Plus |
X | 4712293..4712615 | 1034..1356 | 100 | -> | Plus |
X | 4712686..4713363 | 1357..2034 | 100 | Plus |
Translation from 207 to 1538
> RH59152.pep MLRTLSRVSELPIIVKQLQKRCHNNNNNNIIISGCRILSNNNNNSSIDII RNGRYSSSFFGLFQNAAQAGVSKTNNYATEATVQVNRPFKLHRLDEGPAT EVKLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRGFCHLYSGQEACAV GMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGS MHMYAPNFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQG QVFEAYNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDALPGI WVDGMDVLAVRSATEFAINYVNTHGPLVMETNTYRYSGHSMSDPGTSYRT REEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEVDEATAFA KSDAELGVSHLWTDVYSNNLEPKLRGTIAYDIDHIQERKGVNH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22274-PA | 399 | GF22274-PA | 1..399 | 1..443 | 2042 | 86.9 | Plus |
Dana\GF15055-PA | 403 | GF15055-PA | 41..399 | 83..439 | 1173 | 60.2 | Plus |
Dana\GF22275-PA | 520 | GF22275-PA | 55..401 | 89..435 | 1144 | 58.8 | Plus |
Dana\GF18476-PA | 439 | GF18476-PA | 128..412 | 144..421 | 281 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18722-PA | 440 | GG18722-PA | 1..440 | 1..443 | 2334 | 98 | Plus |
Dere\GG18723-PA | 480 | GG18723-PA | 43..390 | 89..436 | 1161 | 59.8 | Plus |
Dere\GG16874-PA | 439 | GG16874-PA | 128..408 | 144..417 | 270 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12828-PA | 399 | GH12828-PA | 1..399 | 1..443 | 1978 | 84 | Plus |
Dgri\GH20215-PA | 513 | GH20215-PA | 31..384 | 81..434 | 1186 | 59.9 | Plus |
Dgri\GH18279-PA | 439 | GH18279-PA | 127..412 | 143..421 | 298 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pdha-PC | 443 | CG7010-PC | 1..443 | 1..443 | 2333 | 100 | Plus |
Pdha-PD | 399 | CG7010-PD | 1..399 | 1..443 | 2042 | 90.1 | Plus |
Pdha-PA | 399 | CG7010-PA | 1..399 | 1..443 | 2042 | 90.1 | Plus |
Pdha-PB | 328 | CG7010-PB | 1..328 | 116..443 | 1744 | 100 | Plus |
CG7024-PA | 479 | CG7024-PA | 43..390 | 89..436 | 1142 | 59.8 | Plus |
CG8199-PA | 439 | CG8199-PA | 128..388 | 144..393 | 262 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14910-PA | 399 | GI14910-PA | 1..399 | 1..443 | 1971 | 84.7 | Plus |
Dmoj\GI14124-PA | 420 | GI14124-PA | 42..419 | 68..443 | 1260 | 60.1 | Plus |
Dmoj\GI14911-PA | 461 | GI14911-PA | 6..353 | 87..434 | 1175 | 59.5 | Plus |
Dmoj\GI24087-PA | 435 | GI24087-PA | 124..405 | 144..418 | 303 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13094-PA | 399 | GL13094-PA | 1..399 | 1..443 | 2020 | 86 | Plus |
Dper\GL18702-PA | 414 | GL18702-PA | 61..412 | 89..440 | 1205 | 64.2 | Plus |
Dper\GL13095-PA | 540 | GL13095-PA | 58..410 | 82..434 | 1174 | 60.1 | Plus |
Dper\GL22326-PA | 439 | GL22326-PA | 128..412 | 144..421 | 281 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20028-PA | 399 | GA20028-PA | 1..399 | 1..443 | 2013 | 85.8 | Plus |
Dpse\GA25763-PA | 414 | GA25763-PA | 61..412 | 89..440 | 1214 | 64.5 | Plus |
Dpse\GA20040-PA | 533 | GA20040-PA | 58..410 | 82..434 | 1177 | 60.1 | Plus |
Dpse\GA20891-PA | 439 | GA20891-PA | 128..412 | 144..421 | 281 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12361-PA | 441 | GM12361-PA | 1..441 | 1..443 | 2339 | 99.1 | Plus |
Dsec\GM12362-PA | 475 | GM12362-PA | 42..389 | 89..436 | 1170 | 59.8 | Plus |
Dsec\GM23814-PA | 439 | GM23814-PA | 128..388 | 144..393 | 254 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16702-PA | 392 | GD16702-PA | 1..392 | 1..443 | 2035 | 88 | Plus |
Dsim\GD16703-PA | 476 | GD16703-PA | 43..390 | 89..436 | 1170 | 59.8 | Plus |
Dsim\GD18623-PA | 439 | GD18623-PA | 128..388 | 144..393 | 255 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18942-PA | 399 | GJ18942-PA | 1..399 | 1..443 | 1957 | 83.7 | Plus |
Dvir\GJ17759-PA | 420 | GJ17759-PA | 58..419 | 83..443 | 1258 | 61.3 | Plus |
Dvir\GJ18943-PA | 548 | GJ18943-PA | 46..399 | 81..434 | 1214 | 60.7 | Plus |
Dvir\GJ10905-PA | 437 | GJ10905-PA | 126..405 | 144..416 | 285 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25306-PA | 474 | GK25306-PA | 1..474 | 1..443 | 2067 | 82.9 | Plus |
Dwil\GK15549-PA | 430 | GK15549-PA | 70..426 | 82..438 | 1248 | 63 | Plus |
Dwil\GK25307-PA | 632 | GK25307-PA | 47..409 | 72..436 | 1175 | 58.4 | Plus |
Dwil\GK11824-PA | 439 | GK11824-PA | 128..412 | 144..421 | 285 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16361-PA | 438 | GE16361-PA | 1..438 | 1..443 | 2316 | 97.7 | Plus |
Dyak\GE16362-PA | 485 | GE16362-PA | 43..390 | 89..436 | 1155 | 58.6 | Plus |
Dyak\GE25960-PA | 439 | GE25960-PA | 128..409 | 144..418 | 271 | 29.8 | Plus |
Translation from 207 to 1538
> RH59152.hyp MLRTLSRVSELPIIVKQLQKRCHNNNNNNIIISGCRILSNNNNNSSIDII RNGRYSSSFFGLFQNAAQAGVSKTNNYATEATVQVNRPFKLHRLDEGPAT EVKLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRGFCHLYSGQEACAV GMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGS MHMYAPNFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQG QVFEAYNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDALPGI WVDGMDVLAVRSATEFAINYVNTHGPLVMETNTYRYSGHSMSDPGTSYRT REEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEVDEATAFA KSDAELGVSHLWTDVYSNNLEPKLRGTIAYDIDHIQERKGVNH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0334-PC | 443 | CG7010-PC | 1..443 | 1..443 | 2333 | 100 | Plus |
l(1)G0334-PD | 399 | CG7010-PD | 1..399 | 1..443 | 2042 | 90.1 | Plus |
l(1)G0334-PA | 399 | CG7010-PA | 1..399 | 1..443 | 2042 | 90.1 | Plus |
l(1)G0334-PB | 328 | CG7010-PB | 1..328 | 116..443 | 1744 | 100 | Plus |
CG7024-PA | 479 | CG7024-PA | 43..390 | 89..436 | 1142 | 59.8 | Plus |