BDGP Sequence Production Resources |
Search the DGRC for RH59553
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 595 |
Well: | 53 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Mgstl-RB |
Protein status: | RH59553.pep: gold |
Preliminary Size: | 649 |
Sequenced Size: | 602 |
Gene | Date | Evidence |
---|---|---|
CG1742 | 2001-12-17 | Blastp of sequenced clone |
CG1742 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1742 | 2003-01-01 | Sim4 clustering to Release 3 |
Mgstl | 2008-04-29 | Release 5.5 accounting |
Mgstl | 2008-08-15 | Release 5.9 accounting |
Mgstl | 2008-12-18 | 5.12 accounting |
602 bp (602 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071752
> RH59553.complete GAGTATGCAAGTGCACCTGCAGCTATCAAAATGCTTAACCCCGAACTCAT GTCGCTGGAGAACCAGGTGTTCCGATGCTACCTGGGATGGTCGGCTATAT TGATACTCAAGATCTTCGCCGCTGGTATTTACACGGGTCTCATGCGCTTC TTTACGGCCACCTTCGCCAACCCCGAGGACCTGATGTCCCCCAAGCTGAA GGTCAAGTTCGACGATCCGAACGTGGAGCGTGTGCGCCGTGCCCACCGCA ACGACCTGGAGAACATCCTGCCCTTCTTCGCCATCGGTCTGCTCTACGTC CTGACTGATCCGGCCGCCTTTCTGGCCATCAACCTGTTCCGCGCCGTGGG CATCGCCCGCATCGTCCACACACTGGTCTACGCCGTGGTCGTGGTGCCCC AGCCTTCCCGTGCCCTCGCCTTCTTCGTGGCCTTGGGCGCCACCGTCTAC ATGGCCCTGCAGGTCATCGCCTCGGCCGCCTTCTGAGCACATAGGTCTAG TCCTTCTTGTTTTTTTTTTTAAGCATTTTGAAATAATTTCTGAAATATAG AGTTACGCCTACCTCGGCTTTGGTGCTGTTGGATCACAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20908837..20909264 | 160..587 | 2140 | 100 | Plus |
chr2L | 23010047 | chr2L | 22224876..22225302 | 160..587 | 1910 | 97 | Plus |
chrX | 22417052 | chrX | 20907647..20907804 | 2..159 | 790 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CR12628-RA | 621 | CR12628-RA | 195..621 | 160..587 | 1920 | 96.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20907646..20907804 | 1..159 | 99 | -> | Plus |
chrX | 20908837..20909264 | 160..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgstl-RB | 1..456 | 31..486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgstl-RB | 1..456 | 31..486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgstl-RB | 1..456 | 31..486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgstl-RB | 1..456 | 31..486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgstl-RB | 1..456 | 31..486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CR12628-RA | 189..621 | 154..587 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgstl-RB | 2..587 | 2..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgstl-RB | 2..587 | 2..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgstl-RB | 5..591 | 1..587 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgstl-RB | 2..587 | 2..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mgstl-RB | 5..591 | 1..587 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21042489..21042647 | 1..159 | 99 | -> | Plus |
X | 21043680..21044107 | 160..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21042489..21042647 | 1..159 | 99 | -> | Plus |
X | 21043680..21044107 | 160..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21042489..21042647 | 1..159 | 99 | -> | Plus |
X | 21043680..21044107 | 160..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20913516..20913674 | 1..159 | 99 | -> | Plus |
arm_X | 20914707..20915134 | 160..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21028772..21029199 | 160..587 | 100 | Plus | |
X | 21027581..21027739 | 1..159 | 99 | -> | Plus |
Translation from 0 to 485
> RH59553.hyp QYASAPAAIKMLNPELMSLENQVFRCYLGWSAILILKIFAAGIYTGLMRF FTATFANPEDLMSPKLKVKFDDPNVERVRRAHRNDLENILPFFAIGLLYV LTDPAAFLAINLFRAVGIARIVHTLVYAVVVVPQPSRALAFFVALGATVY MALQVIASAAF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mgstl-PC | 151 | CG1742-PC | 1..151 | 11..161 | 757 | 100 | Plus |
Mgstl-PB | 151 | CG1742-PB | 1..151 | 11..161 | 757 | 100 | Plus |
Mgstl-PA | 152 | CG1742-PA | 6..152 | 15..161 | 614 | 83 | Plus |
CG33178-PC | 165 | CG33178-PC | 3..157 | 3..155 | 395 | 52.3 | Plus |
CG33178-PA | 165 | CG33178-PA | 3..157 | 3..155 | 395 | 52.3 | Plus |
Translation from 30 to 485
> RH59553.pep MLNPELMSLENQVFRCYLGWSAILILKIFAAGIYTGLMRFFTATFANPED LMSPKLKVKFDDPNVERVRRAHRNDLENILPFFAIGLLYVLTDPAAFLAI NLFRAVGIARIVHTLVYAVVVVPQPSRALAFFVALGATVYMALQVIASAA F*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21709-PA | 195 | GF21709-PA | 1..195 | 1..151 | 672 | 70.3 | Plus |
Dana\GF21219-PA | 170 | GF21219-PA | 22..159 | 5..142 | 398 | 55.8 | Plus |
Dana\GF21218-PA | 170 | GF21218-PA | 22..159 | 6..142 | 357 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19704-PA | 195 | GG19704-PA | 1..195 | 1..151 | 709 | 74.9 | Plus |
Dere\GG17862-PA | 165 | GG17862-PA | 12..154 | 1..142 | 398 | 54.5 | Plus |
Dere\GG17861-PA | 167 | GG17861-PA | 19..156 | 6..142 | 349 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12207-PA | 191 | GH12207-PA | 1..191 | 1..151 | 603 | 64.4 | Plus |
Dgri\GH24641-PA | 162 | GH24641-PA | 2..151 | 5..142 | 397 | 53.3 | Plus |
Dgri\GH24640-PA | 167 | GH24640-PA | 18..160 | 5..146 | 345 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mgstl-PC | 151 | CG1742-PC | 1..151 | 1..151 | 757 | 100 | Plus |
Mgstl-PB | 151 | CG1742-PB | 1..151 | 1..151 | 757 | 100 | Plus |
Mgstl-PA | 152 | CG1742-PA | 6..152 | 5..151 | 614 | 83 | Plus |
CG33178-PC | 165 | CG33178-PC | 17..157 | 5..145 | 392 | 54.6 | Plus |
CG33178-PA | 165 | CG33178-PA | 17..157 | 5..145 | 392 | 54.6 | Plus |
CG33178-PB | 177 | CG33178-PB | 17..169 | 5..145 | 370 | 50.3 | Plus |
CG33177-PA | 167 | CG33177-PA | 19..160 | 6..146 | 352 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15739-PA | 150 | GI15739-PA | 4..150 | 5..151 | 595 | 76.2 | Plus |
Dmoj\GI21688-PA | 177 | GI21688-PA | 15..166 | 3..142 | 392 | 52 | Plus |
Dmoj\GI21687-PA | 159 | GI21687-PA | 11..155 | 6..149 | 353 | 48.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16397-PA | 195 | GL16397-PA | 1..195 | 1..151 | 634 | 66.2 | Plus |
Dper\GL15178-PA | 163 | GL15178-PA | 15..152 | 5..142 | 392 | 54.3 | Plus |
Dper\GL15177-PA | 166 | GL15177-PA | 18..162 | 6..149 | 356 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14506-PA | 195 | GA14506-PA | 1..195 | 1..151 | 634 | 66.2 | Plus |
Dpse\GA22801-PA | 163 | GA22801-PA | 15..152 | 5..142 | 392 | 54.3 | Plus |
Dpse\GA22800-PA | 166 | GA22800-PA | 18..162 | 6..149 | 358 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23058-PA | 195 | GM23058-PA | 1..195 | 1..151 | 724 | 76.9 | Plus |
Dsec\GM12056-PA | 165 | GM12056-PA | 12..154 | 1..142 | 399 | 54.5 | Plus |
Dsec\GM12055-PA | 167 | GM12055-PA | 19..156 | 6..142 | 353 | 50.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17510-PA | 195 | GD17510-PA | 1..195 | 1..151 | 717 | 75.9 | Plus |
Dsim\GD17192-PA | 165 | GD17192-PA | 12..154 | 1..142 | 399 | 54.5 | Plus |
Dsim\GD17191-PA | 167 | GD17191-PA | 19..156 | 6..142 | 353 | 50.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18600-PA | 191 | GJ18600-PA | 1..191 | 1..151 | 598 | 63.9 | Plus |
Dvir\GJ15869-PA | 162 | GJ15869-PA | 2..151 | 5..142 | 386 | 52 | Plus |
Dvir\GJ15868-PA | 165 | GJ15868-PA | 15..161 | 4..149 | 369 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25033-PA | 152 | GK25033-PA | 6..152 | 5..151 | 563 | 70.1 | Plus |
Dwil\GK16260-PA | 185 | GK16260-PA | 21..174 | 1..142 | 381 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17903-PA | 195 | GE17903-PA | 1..195 | 1..151 | 633 | 71.8 | Plus |
Dyak\GE17164-PA | 165 | GE17164-PA | 12..154 | 1..142 | 398 | 54.5 | Plus |
Dyak\GE17163-PA | 167 | GE17163-PA | 19..156 | 6..142 | 352 | 49.3 | Plus |