Clone RH61964 Report

Search the DGRC for RH61964

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:619
Well:64
Vector:pFlc-1
Associated Gene/TranscriptCG11147-RA
Protein status:RH61964.pep: gold
Preliminary Size:2119
Sequenced Size:3045

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11147 2002-01-01 Sim4 clustering to Release 2
CG11147 2003-08-11 Blastp of sequenced clone
CG11147 2008-04-29 Release 5.5 accounting
CG11147 2008-08-15 Release 5.9 accounting
CG11147 2008-12-18 5.12 accounting

Clone Sequence Records

RH61964.complete Sequence

3045 bp (3045 high quality bases) assembled on 2003-08-11

GenBank Submission: BT010210

> RH61964.complete
GGTATACACTCATTTGTAGAAGTTAACAGCACCGCTTCGCAAAGCGTCGC
GAGCTGCGAGTGGGGAGCGCTGCGATCGACGAAGGCTAAGAGAAGCGATG
ACTGGCGCTTCGAGCCAAGTTGGGCCCAGTGGAGCCCAGTTGAGCCAAGC
CGGGTGGATTGAGCTTGCGAGTGCACGATCCGCCGCTTGGTCAGCTCAGT
CGAGAAACGGAGCTTGCAAGCGACACTTGTGGCAAGCGGAGACGTTCAGC
CGATCCGATTCGATTCGATCCAATCCAAAACAGCCGAGCGTGAAAGACCG
TCGAAAGAAAAACGGAAAAAGCCACTCGTCGAATCGGCGAAAAGCAAAGA
AAAAATTGCAACACCAAAAGCGCGCGTGCGCAACCCGATAAGTTAGAAGA
TAGGCGAAAAATCCCTCGACTTATACGAACACAACAATGGCGGCCGTTGA
GGTACGGAATGGCTATAAGTACTATGGCTCCAAATCAAATCCCAAGATTG
TGCTTAACCAGCTGAATATGAACGTGATGCGTGGTTCTATATACGGATTG
CTGGGTGCCTCCGGATGCGGAAAGACAACCCTGCTCTCTTGCATCGTCGG
CCAGAGGCGCCTCAACGGCGGCGAGGTCGTCGTGCTTGGGGCCAAGCCAG
GAGAGCCTGGTAGCGGCGTGCCAGGATCCCGGGTGGGATTCATGCCCCAG
GAGATTGCCCTGGTCGAGGAGATGACCGTCAAGGAGACAATCTTCTACTT
CGGTCGCATCTACGGCCTGACAGACGAACGCATCCGGGAGAAGTTCAAGC
TGCTCAAGGAGCTGCTGCAACTGCCACCGGCTAGGCAGATGATCAAGCAG
TGCAGCGGTGGACAGCAGCGACGCTTGTCCTTCGCCTGCGCCATGATCCA
CGATCCGGAGCTTCTCATTCTGGACGAGCCCACTGTGGGATTGGATCCAA
TGCTGCGTGAAAAAATCTGGGACTTTCTCGTGGAGACGACGAGGAATAGC
AAATTGGCTGTGATTATAACCACCCATTACATAGAGGAAGCCAAACAGGC
AAATTGTATTGGTCTTATGCGCAATGGTGTTCTATTGGCTGAGGATACTC
CTACCAACATCATGATCAAGTTCGGAACTCAGTCGATCGAGGACGCCTTC
CTCATTCTGAGCCAGCGGCAGGGCAACGAAGATGAGTTGGCCCAAATCAT
GGATCACAATAAGAATCAGGCTTTGCCGGCAGCTGTGCTGCCCCCTGAGG
TAATAGACACACACGAGCCCAACATGCCGGAAAAACAGCCCATCCCGTTC
GAGGAGCCCCTAAACGAGAATCGCAAAAAGATTTTCTTCACCACCAAGGG
CAGGGTAAAGGCACTGATGACAAAGAACTTTGTACAACTCTTTAGACAAC
CCTCGGGAATTATTTTCATGCTACTATTTCCCATCATACAACTGACGTGC
TTTTATCTGGCCATTGGCAAGACGCCCACGAATCTTGAAATAGGAGTTTA
TTCCGGCGAAGTGGAGAACTATGGGGAGTGCTTTGATGAAAACCTGGTCA
CAGTCTACAAGGATAGCGACAACGAGAGCTGTCTATTCAACAAGTTATCC
TGCAGATACATACGCGTGTTGGGTGACGATGTGGCCACGCGGAAATACTA
TGCCAGCGAAGCAGATGCTCTGAACGATGCAAAGCGGGCCACAACCGTTG
GCTATTTGCACTTTGCCCAGAACTTCAGCGATTCGATTCTCTCGGTAATG
GAGGATGGCATCCACTCCAGTGACGGAGCTGTGGACCACGCCGAGCTTAG
TATCCACATCGATATGACGGATCAACAAGTTGCGTACTTCATGCAGCGCA
AACTTCGTGACAAGTTCAGTACATTCATGCGCAGTGTTGTCAAGGACTGC
AATGTATCTACGGCCATTGTAGATCTGCCCGTCCAGTTCCAGGAACCAAT
CTTTGGCAGCACGGACATCGAGTTCCAGCAGTACTGTGCCCCAGGAGTGG
TAATGACCATGGTCTTCTTCCTGGCCACTTTGATGACGGCTGCAGTGTTC
ATTTCTGAACGCATGGATGGCATCTGGGATCGAACTCTATTGGCAGGTGT
CTCGGCCACCGAAATGCTGTGGGCTCATCTTCTAACCCAGCTCATCATCA
TGGCCCTGCAGTCGTTCGAGGTTATTATGTATATTGGCCTAGTGTTCGAT
ACTTACAATAATGGGGATACCACAACGCTCATTGGATTGCTAACACTGAC
CGCATTTTGTGGCATGTTGTTCGGTCTCTTCATATCCGTATTTTGCAAAT
CGCATACAGAGGCAAACTTTGTTGCTACTGGTGCTTTTTATCCCATGATC
ATACTGTGTGGACTGCTGTGGCCTTTGGAGAGCATGCCGCAGTTTCTGCA
GGATCTAGTGATGGTGCTACCCTTCACCATTCCCTCCATCTCCGCTCGAA
ATGTGATCGAGAAGGGTTGGAGCATCACCCATGAGAAGGTCTACAATGGT
TTCCTGGTCATGGCCGGCTGGACGATCATCTTCTTCGTGCTCTGCCTGAT
CGGCATCAGACGCAAGGCGTAATTTTGGACAATGGGCTAAACTTTAATAT
TCGGGGGCCTTTCATTTAGTTGTAACGTTTTAGCATTTTTTGATAGGTGA
TCTATGTATGTGCATATCGTTTTAATTTAATAACTATCGGAAGCATATCA
CTCGCATGTTGTAGACTCTCATCACACAAGGAAACACATTCATACCAACG
AATTGTAACATATTTTTAGGCAACGTTCTATATACTGCACTAAAAGTATC
ATAAGGTTTTAAGGGTGTCTCACAAAAAAATATTTATAATACACAGGACA
ACAAATCGTACTCATTGACAAGCACAAATTTCGTATTTCATTATTTGATC
AACTCACGAAAATTAGAACAAATCCATACATTTTTATTCACATCGTATGC
GCGTGAATTTTGTATATTAAATTGTGAAATTATGTAAATCGAAATTTCAA
ATCAACCAAAAATATAAACCTAAATTAAATAAAAAAAAAAAAAAA

RH61964.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:29:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG11147-RA 3053 CG11147-RA 1..3031 2..3032 15140 99.9 Plus
CG11147-RB 3058 CG11147-RB 1..3036 2..3032 15065 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:47:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5732768..5733438 3030..2360 3355 100 Minus
chr2L 23010047 chr2L 5735436..5735858 963..541 2070 99.3 Minus
chr2L 23010047 chr2L 5734396..5734811 1820..1405 2050 99.5 Minus
chr2L 23010047 chr2L 5739756..5740156 427..27 1990 99.8 Minus
chr2L 23010047 chr2L 5734867..5735214 1405..1058 1710 99.4 Minus
chr2L 23010047 chr2L 5733653..5733920 2275..2008 1340 100 Minus
chr2L 23010047 chr2L 5734157..5734344 2007..1820 925 99.5 Minus
chr2L 23010047 chr2L 5735918..5736031 540..427 570 100 Minus
chr2L 23010047 chr2L 5735279..5735372 1057..964 470 100 Minus
chr2L 23010047 chr2L 5733503..5733591 2361..2273 415 97.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:35:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:47:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5733669..5734341 3032..2360 3365 100 Minus
2L 23513712 2L 5736339..5736761 963..541 2115 100 Minus
2L 23513712 2L 5735299..5735714 1820..1405 2080 100 Minus
2L 23513712 2L 5740661..5741061 427..27 1990 99.8 Minus
2L 23513712 2L 5735770..5736117 1405..1058 1740 100 Minus
2L 23513712 2L 5734556..5734823 2275..2008 1340 100 Minus
2L 23513712 2L 5735060..5735247 2007..1820 940 100 Minus
2L 23513712 2L 5736821..5736934 540..427 570 100 Minus
2L 23513712 2L 5736182..5736275 1057..964 470 100 Minus
2L 23513712 2L 5734406..5734494 2361..2273 445 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:58:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5733669..5734341 3032..2360 3365 100 Minus
2L 23513712 2L 5736339..5736761 963..541 2115 100 Minus
2L 23513712 2L 5735299..5735714 1820..1405 2080 100 Minus
2L 23513712 2L 5740661..5741061 427..27 1990 99.7 Minus
2L 23513712 2L 5735770..5736117 1405..1058 1740 100 Minus
2L 23513712 2L 5734556..5734823 2275..2008 1340 100 Minus
2L 23513712 2L 5735060..5735247 2007..1820 940 100 Minus
2L 23513712 2L 5736821..5736934 540..427 570 100 Minus
2L 23513712 2L 5736182..5736275 1057..964 470 100 Minus
2L 23513712 2L 5734406..5734494 2361..2273 445 100 Minus
2L 23513712 2L 5741217..5741244 29..2 140 100 Minus
Blast to na_te.dros performed 2019-03-15 16:47:23
Subject Length Description Subject Range Query Range Score Percent Strand
412 7567 412 412 7567bp 1729..1813 2953..3030 119 67.1 Plus

RH61964.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:48:22 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5734157..5734343 1821..2007 99 <- Minus
chr2L 5733655..5733920 2008..2273 100 <- Minus
chr2L 5732768..5733437 2361..3030 100 <- Minus
chr2L 5733504..5733590 2274..2360 97 <- Minus
chr2L 5734396..5734811 1405..1820 99 <- Minus
chr2L 5734868..5735214 1058..1404 99 <- Minus
chr2L 5735279..5735372 964..1057 100 <- Minus
chr2L 5735436..5735858 541..963 99 <- Minus
chr2L 5735918..5736030 428..540 100 <- Minus
chr2L 5739756..5740153 30..427 99 <- Minus
chr2L 5740312..5740339 1..29 96   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:51:28 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
CG11147-RB 1..2136 437..2572 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:48:21 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
CG11147-RB 1..2136 437..2572 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:09:58 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
CG11147-RA 1..2136 437..2572 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:15:48 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
CG11147-RB 1..2136 437..2572 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:49:12 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
CG11147-RA 1..2136 437..2572 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:12:22 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
CG11147-RA 1..3025 2..3026 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:48:20 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
CG11147-RA 1..3025 2..3026 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:09:58 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
CG11147-RA 1..3025 2..3026 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:15:48 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
CG11147-RA 1..3025 2..3026 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:49:12 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
CG11147-RA 1..3025 2..3026 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:22 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5735060..5735246 1821..2007 100 <- Minus
2L 5733671..5734340 2361..3030 100 <- Minus
2L 5734407..5734493 2274..2360 100 <- Minus
2L 5734558..5734823 2008..2273 100 <- Minus
2L 5735299..5735714 1405..1820 100 <- Minus
2L 5735771..5736117 1058..1404 100 <- Minus
2L 5736182..5736275 964..1057 100 <- Minus
2L 5736339..5736761 541..963 100 <- Minus
2L 5736821..5736933 428..540 100 <- Minus
2L 5740661..5741058 30..427 99 <- Minus
2L 5741217..5741244 1..29 96   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:22 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5735060..5735246 1821..2007 100 <- Minus
2L 5733671..5734340 2361..3030 100 <- Minus
2L 5734407..5734493 2274..2360 100 <- Minus
2L 5734558..5734823 2008..2273 100 <- Minus
2L 5735299..5735714 1405..1820 100 <- Minus
2L 5735771..5736117 1058..1404 100 <- Minus
2L 5736182..5736275 964..1057 100 <- Minus
2L 5736339..5736761 541..963 100 <- Minus
2L 5736821..5736933 428..540 100 <- Minus
2L 5740661..5741058 30..427 99 <- Minus
2L 5741217..5741244 1..29 96   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:22 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5735060..5735246 1821..2007 100 <- Minus
2L 5733671..5734340 2361..3030 100 <- Minus
2L 5734407..5734493 2274..2360 100 <- Minus
2L 5734558..5734823 2008..2273 100 <- Minus
2L 5735299..5735714 1405..1820 100 <- Minus
2L 5735771..5736117 1058..1404 100 <- Minus
2L 5736182..5736275 964..1057 100 <- Minus
2L 5736339..5736761 541..963 100 <- Minus
2L 5736821..5736933 428..540 100 <- Minus
2L 5740661..5741058 30..427 99 <- Minus
2L 5741217..5741244 1..29 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:09:58 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5736821..5736933 428..540 100 <- Minus
arm_2L 5740661..5741058 30..427 99 <- Minus
arm_2L 5741217..5741244 1..29 96   Minus
arm_2L 5733671..5734340 2361..3030 100 <- Minus
arm_2L 5734407..5734493 2274..2360 100 <- Minus
arm_2L 5734558..5734823 2008..2273 100 <- Minus
arm_2L 5735060..5735246 1821..2007 100 <- Minus
arm_2L 5735299..5735714 1405..1820 100 <- Minus
arm_2L 5735771..5736117 1058..1404 100 <- Minus
arm_2L 5736182..5736275 964..1057 100 <- Minus
arm_2L 5736339..5736761 541..963 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:49:41 Download gff for RH61964.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5736182..5736275 964..1057 100 <- Minus
2L 5733671..5734340 2361..3030 100 <- Minus
2L 5734407..5734493 2274..2360 100 <- Minus
2L 5734558..5734823 2008..2273 100 <- Minus
2L 5735060..5735246 1821..2007 100 <- Minus
2L 5735299..5735714 1405..1820 100 <- Minus
2L 5735771..5736117 1058..1404 100 <- Minus
2L 5736339..5736761 541..963 100 <- Minus
2L 5736821..5736933 428..540 100 <- Minus
2L 5740661..5741058 30..427 99 <- Minus
2L 5741217..5741244 1..29 96   Minus

RH61964.pep Sequence

Translation from 436 to 2571

> RH61964.pep
MAAVEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLL
SCIVGQRRLNGGEVVVLGAKPGEPGSGVPGSRVGFMPQEIALVEEMTVKE
TIFYFGRIYGLTDERIREKFKLLKELLQLPPARQMIKQCSGGQQRRLSFA
CAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAVIITTHYIE
EAKQANCIGLMRNGVLLAEDTPTNIMIKFGTQSIEDAFLILSQRQGNEDE
LAQIMDHNKNQALPAAVLPPEVIDTHEPNMPEKQPIPFEEPLNENRKKIF
FTTKGRVKALMTKNFVQLFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNL
EIGVYSGEVENYGECFDENLVTVYKDSDNESCLFNKLSCRYIRVLGDDVA
TRKYYASEADALNDAKRATTVGYLHFAQNFSDSILSVMEDGIHSSDGAVD
HAELSIHIDMTDQQVAYFMQRKLRDKFSTFMRSVVKDCNVSTAIVDLPVQ
FQEPIFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVFISERMDGIWDRT
LLAGVSATEMLWAHLLTQLIIMALQSFEVIMYIGLVFDTYNNGDTTTLIG
LLTLTAFCGMLFGLFISVFCKSHTEANFVATGAFYPMIILCGLLWPLESM
PQFLQDLVMVLPFTIPSISARNVIEKGWSITHEKVYNGFLVMAGWTIIFF
VLCLIGIRRKA*

RH61964.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:36:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14305-PA 709 GF14305-PA 1..709 1..711 3513 93 Plus
Dana\GF18585-PA 811 GF18585-PA 77..809 2..710 1493 39.4 Plus
Dana\GF20731-PA 777 GF20731-PA 47..775 3..710 1309 37.4 Plus
Dana\GF21847-PA 1704 GF21847-PA 520..739 11..231 264 29.2 Plus
Dana\GF21847-PA 1704 GF21847-PA 1357..1556 11..214 263 32.4 Plus
Dana\GF24599-PA 1384 GF24599-PA 330..543 3..221 256 27.6 Plus
Dana\GF24599-PA 1384 GF24599-PA 1042..1219 22..201 190 27.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:36:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24284-PA 711 GG24284-PA 1..711 1..711 3776 98.7 Plus
Dere\GG11610-PA 808 GG11610-PA 72..806 2..710 1482 39 Plus
Dere\GG11472-PA 777 GG11472-PA 47..775 3..710 1326 38.3 Plus
Dere\GG17548-PA 1693 GG17548-PA 1355..1554 11..214 266 32.9 Plus
Dere\GG17548-PA 1693 GG17548-PA 515..738 3..231 265 29.2 Plus
Dere\GG23877-PA 1598 GG23877-PA 467..682 11..230 249 31 Plus
Dere\GG23877-PA 1598 GG23877-PA 1281..1526 32..252 234 26.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:36:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10691-PA 708 GH10691-PA 1..708 1..711 3301 87.8 Plus
Dgri\GH14158-PA 813 GH14158-PA 79..811 2..710 1488 39.1 Plus
Dgri\GH19414-PA 922 GH19414-PA 397..920 208..710 697 29.8 Plus
Dgri\GH19414-PA 922 GH19414-PA 47..250 3..206 615 61.3 Plus
Dgri\GH23856-PA 111 GH23856-PA 6..102 116..212 294 54.6 Plus
Dgri\GH12892-PA 1743 GH12892-PA 514..793 3..294 271 26.4 Plus
Dgri\GH12892-PA 1743 GH12892-PA 1350..1549 11..214 261 31.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG11147-PB 711 CG11147-PB 1..711 1..711 3678 100 Plus
CG11147-PA 711 CG11147-PA 1..711 1..711 3678 100 Plus
snu-PD 763 CG9990-PD 41..761 2..710 1447 40 Plus
snu-PG 764 CG9990-PG 30..762 2..710 1441 39.1 Plus
snu-PF 775 CG9990-PF 41..773 2..710 1441 39.1 Plus
snu-PE 766 CG9990-PE 30..764 2..710 1428 39 Plus
snu-PB 777 CG9990-PB 41..775 2..710 1428 39 Plus
snu-PA 808 CG9990-PA 72..806 2..710 1428 39 Plus
CG33970-PC 777 CG33970-PC 47..775 3..710 1337 38.3 Plus
CG33970-PA 777 CG33970-PA 47..775 3..710 1337 38.3 Plus
CG33970-PB 518 CG33970-PB 1..516 216..710 651 28.9 Plus
ABCA-PD 1692 CG1718-PD 516..738 4..231 265 29.3 Plus
ABCA-PD 1692 CG1718-PD 1354..1568 11..229 265 31.5 Plus
ABCA-PC 1709 CG1718-PC 516..738 4..231 265 29.3 Plus
ABCA-PC 1709 CG1718-PC 1354..1568 11..229 265 31.5 Plus
ABCA-PB 1714 CG1718-PB 538..760 4..231 265 29.3 Plus
ABCA-PB 1714 CG1718-PB 1376..1590 11..229 265 31.5 Plus
Eato-PB 1597 CG31731-PB 468..683 11..230 251 30.4 Plus
Eato-PB 1597 CG31731-PB 1257..1467 6..214 235 30 Plus
CG34120-PD 1981 CG34120-PD 845..1046 8..219 231 32.4 Plus
CG34120-PC 1997 CG34120-PC 861..1062 8..219 231 32.4 Plus
CG34120-PE 1998 CG34120-PE 862..1063 8..219 231 32.4 Plus
CG42816-PB 1459 CG42816-PB 336..532 1..203 226 28.4 Plus
CG6052-PA 1700 CG6052-PA 515..738 4..231 226 28.2 Plus
CG34120-PD 1981 CG34120-PD 1650..1872 23..266 223 25.2 Plus
CG34120-PC 1997 CG34120-PC 1666..1888 23..266 223 25.2 Plus
CG34120-PE 1998 CG34120-PE 1667..1889 23..266 223 25.2 Plus
CG8908-PE 1626 CG8908-PE 1244..1493 6..270 221 26.6 Plus
CG31213-PC 1809 CG31213-PC 491..703 4..221 218 29.1 Plus
CG31213-PB 1809 CG31213-PB 491..703 4..221 218 29.1 Plus
CG6052-PA 1700 CG6052-PA 1348..1528 20..203 215 27.8 Plus
CG1801-PC 1655 CG1801-PC 510..726 16..231 202 30.8 Plus
E23-PE 1017 CG3327-PE 363..547 18..197 195 28.8 Plus
E23-PD 1017 CG3327-PD 363..547 18..197 195 28.8 Plus
E23-PC 1017 CG3327-PC 363..547 18..197 195 28.8 Plus
CG11069-PA 604 CG11069-PA 20..206 5..195 185 28.1 Plus
CG42816-PB 1459 CG42816-PB 1135..1328 3..201 184 27.2 Plus
Mdr50-PA 1313 CG8523-PA 448..673 22..250 183 27 Plus
CG1494-PC 1695 CG1494-PC 1355..1525 5..171 178 30.6 Plus
CG1494-PB 1695 CG1494-PB 1355..1525 5..171 178 30.6 Plus
Mdr49-PB 1101 CG3879-PB 864..1084 9..226 175 26.3 Plus
Mdr49-PA 1302 CG3879-PA 1065..1285 9..226 175 26.3 Plus
CG8908-PE 1626 CG8908-PE 474..667 4..203 174 26.4 Plus
CG10226-PB 1206 CG10226-PB 958..1196 6..233 170 24.8 Plus
CG10226-PA 1320 CG10226-PA 1072..1310 6..233 170 24.8 Plus
CG9663-PA 808 CG9663-PA 153..345 6..197 169 28.4 Plus
CG31792-PC 1323 CG31792-PC 446..640 17..221 167 24.8 Plus
CG31792-PB 1323 CG31792-PB 446..640 17..221 167 24.8 Plus
Mdr49-PB 1101 CG3879-PB 218..483 22..284 166 24.4 Plus
Mdr49-PA 1302 CG3879-PA 419..684 22..284 166 24.4 Plus
st-PA 666 CG4314-PA 82..273 14..197 166 27.1 Plus
CG43672-PA 1609 CG33173-PA 436..621 2..190 164 24.1 Plus
CG9664-PC 283 CG9664-PC 30..192 10..170 159 27.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:36:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11223-PA 709 GI11223-PA 1..709 1..711 3271 86.2 Plus
Dmoj\GI22239-PA 812 GI22239-PA 78..810 2..710 1497 39.7 Plus
Dmoj\GI22617-PA 896 GI22617-PA 200..894 37..710 1208 36.8 Plus
Dmoj\GI18234-PA 1489 GI18234-PA 414..629 11..231 267 31.6 Plus
Dmoj\GI14446-PA 1702 GI14446-PA 1317..1531 11..229 263 31.1 Plus
Dmoj\GI14446-PA 1702 GI14446-PA 503..788 1..298 259 25 Plus
Dmoj\GI18234-PA 1489 GI18234-PA 1229..1416 33..214 211 28.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:36:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19119-PA 712 GL19119-PA 1..712 1..711 3422 90.2 Plus
Dper\GL13795-PA 812 GL13795-PA 78..810 2..710 1476 39 Plus
Dper\GL21842-PA 777 GL21842-PA 47..775 3..710 1298 37.5 Plus
Dper\GL21227-PA 674 GL21227-PA 336..539 16..214 260 30.6 Plus
Dper\GL16402-PA 1967 GL16402-PA 843..1088 8..269 258 31.3 Plus
Dper\GL16402-PA 1967 GL16402-PA 1633..1830 20..230 230 27.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:36:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10794-PA 712 GA10794-PA 1..712 1..711 3422 90.2 Plus
Dpse\GA26799-PB 764 GA26799-PB 42..762 2..710 1483 39.8 Plus
Dpse\GA26799-PC 776 GA26799-PC 42..774 2..710 1477 39 Plus
Dpse\GA26799-PA 812 GA26799-PA 78..810 2..710 1476 39 Plus
Dpse\GA30176-PA 777 GA30176-PA 47..775 3..710 1298 37.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18001-PA 711 GM18001-PA 1..711 1..711 3814 99.6 Plus
Dsec\GM12733-PA 808 GM12733-PA 72..806 2..710 1476 38.9 Plus
Dsec\GM10317-PA 789 GM10317-PA 47..787 3..710 1306 37.4 Plus
Dsec\GM22632-PA 1692 GM22632-PA 1354..1553 11..214 265 32.9 Plus
Dsec\GM22632-PA 1692 GM22632-PA 515..738 3..231 264 29.2 Plus
Dsec\GM15192-PA 1594 GM15192-PA 466..721 11..272 253 28.6 Plus
Dsec\GM15192-PA 1594 GM15192-PA 1255..1538 6..268 247 26.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22636-PA 432 GD22636-PA 1..432 280..711 2302 99.1 Plus
Dsim\GD21379-PA 4229 GD21379-PA 72..789 2..693 1440 38.9 Plus
Dsim\GD21277-PA 777 GD21277-PA 47..775 3..710 1313 37.8 Plus
Dsim\GD22635-PA 137 GD22635-PA 1..136 135..270 730 100 Plus
Dsim\GD22634-PA 95 GD22634-PA 1..88 1..88 483 98.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:36:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12249-PA 709 GJ12249-PA 1..709 1..711 3406 91.1 Plus
Dvir\GJ23044-PA 812 GJ23044-PA 78..810 2..710 1487 39 Plus
Dvir\GJ23863-PA 777 GJ23863-PA 47..775 3..710 1289 37.1 Plus
Dvir\GJ18141-PA 1586 GJ18141-PA 466..681 11..231 277 33.6 Plus
Dvir\GJ18784-PA 1719 GJ18784-PA 1300..1518 8..230 247 30.1 Plus
Dvir\GJ18784-PA 1719 GJ18784-PA 469..691 3..230 225 27.4 Plus
Dvir\GJ18141-PA 1586 GJ18141-PA 1256..1465 6..214 207 29.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:36:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15422-PA 710 GK15422-PA 1..710 1..711 3306 85.8 Plus
Dwil\GK12102-PA 812 GK12102-PA 78..810 2..710 1480 39.1 Plus
Dwil\GK13315-PA 777 GK13315-PA 47..775 3..710 1295 37.9 Plus
Dwil\GK18193-PA 1529 GK18193-PA 406..691 3..298 268 28.3 Plus
Dwil\GK21220-PA 404 GK21220-PA 16..211 21..216 260 35 Plus
Dwil\GK18193-PA 1529 GK18193-PA 1208..1409 18..214 220 29.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:36:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18980-PA 711 GE18980-PA 1..711 1..711 3775 98.6 Plus
Dyak\GE23797-PA 808 GE23797-PA 72..806 2..710 1481 39 Plus
Dyak\GE23664-PA 777 GE23664-PA 47..775 3..710 1319 38.2 Plus
Dyak\GE15308-PA 1692 GE15308-PA 515..738 3..231 277 30 Plus
Dyak\GE15308-PA 1692 GE15308-PA 1354..1553 11..214 267 32.9 Plus
Dyak\GE18679-PA 1597 GE18679-PA 466..681 11..230 252 31.4 Plus
Dyak\GE18679-PA 1597 GE18679-PA 1268..1541 20..268 228 24.6 Plus

RH61964.hyp Sequence

Translation from 436 to 2571

> RH61964.hyp
MAAVEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLL
SCIVGQRRLNGGEVVVLGAKPGEPGSGVPGSRVGFMPQEIALVEEMTVKE
TIFYFGRIYGLTDERIREKFKLLKELLQLPPARQMIKQCSGGQQRRLSFA
CAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAVIITTHYIE
EAKQANCIGLMRNGVLLAEDTPTNIMIKFGTQSIEDAFLILSQRQGNEDE
LAQIMDHNKNQALPAAVLPPEVIDTHEPNMPEKQPIPFEEPLNENRKKIF
FTTKGRVKALMTKNFVQLFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNL
EIGVYSGEVENYGECFDENLVTVYKDSDNESCLFNKLSCRYIRVLGDDVA
TRKYYASEADALNDAKRATTVGYLHFAQNFSDSILSVMEDGIHSSDGAVD
HAELSIHIDMTDQQVAYFMQRKLRDKFSTFMRSVVKDCNVSTAIVDLPVQ
FQEPIFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVFISERMDGIWDRT
LLAGVSATEMLWAHLLTQLIIMALQSFEVIMYIGLVFDTYNNGDTTTLIG
LLTLTAFCGMLFGLFISVFCKSHTEANFVATGAFYPMIILCGLLWPLESM
PQFLQDLVMVLPFTIPSISARNVIEKGWSITHEKVYNGFLVMAGWTIIFF
VLCLIGIRRKA*

RH61964.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:06:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG11147-PB 711 CG11147-PB 1..711 1..711 3678 100 Plus
CG11147-PA 711 CG11147-PA 1..711 1..711 3678 100 Plus
CG9990-PD 763 CG9990-PD 41..761 2..710 1447 40 Plus
CG9990-PG 764 CG9990-PG 30..762 2..710 1441 39.1 Plus
CG9990-PF 775 CG9990-PF 41..773 2..710 1441 39.1 Plus