BDGP Sequence Production Resources |
Search the DGRC for RH62806
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 628 |
Well: | 6 |
Vector: | pFlc-1 |
Associated Gene/Transcript | PrBP-RA |
Protein status: | RH62806.pep: gold |
Preliminary Size: | 590 |
Sequenced Size: | 1153 |
Gene | Date | Evidence |
---|---|---|
CG9296 | 2001-12-17 | Blastp of sequenced clone |
CG9296 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9296 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9296 | 2008-04-29 | Release 5.5 accounting |
CG9296 | 2008-08-15 | Release 5.9 accounting |
CG9296 | 2008-12-18 | 5.12 accounting |
1153 bp (1153 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071756
> RH62806.complete GATTTAACTAGTTCACGGCCGAACAGCTGTCTCGGCATTAGAATTAAAAA TAAACATAATTGATTTTCTGCCCGAAAGTATACGTAAACGCGTAGGCGCT CCCACCTGGCAGTGCACCCGATTGACCGACTTGCAACCTCCACGGCCACC GATGGGCTCCGACGACCAGAGTGCCGGGGACAGGATCCAGAAGGGATTCC AGATCAACTATATGATTCTGCGGGATGCCGACAGCGGAAAAATAATCTGG CAGGAGAACAAGGACTTCTCGGCACCGGACCAGGAACATGAGGCCCGAGT GCCGGTGAAAATACTCGACATGCGTGCCGTTTCCCGGGAGATCAACTTCA GCACCATCGAGTCGATGGAGAACTTTCGCCTGGACCAGAAGGTGCTCTTC AAGGGCCGCATCATGGAGGAGTGGTTCTTTGAGATGGGATTCGTGGGTGC CAACACCACCAACACCTGGCAGTCGACAATCGAGGCGGCACCCGAATCCC AGATGATGCCTGCCAAGGTCTTGAACGGCAATGTGACTATCCAAACCAGT TTCTACGACAACGAGACACTCATCACCAAATCGGTTGTGCGCCTGTACTA CATTTAGGCAAATGTGAGTCACCTGCCGTTCTGCTGATCGACCAGGTGTT CTCGCGTCCACCCACAAGTTTTTTTGGTTGTTCTTCAAGATGTTCTCTAC AAAACATGCATACTTCGCTTTTGAGTACTTCAGCATTTCAATGCAATTGT TTGCGCGTTTATGAACTAGTTGTAGTCCAATGCATTTTAATCTAATCTAA TTTTACGTTTACCACAGTAATATATTAATAAAAAATTAACAAATGTAATT TGCATAAACCAAGGAGTCTGTCAACTCGAATTCGAACGCAACATGCATGC TTATGTACAAATCTTTTGTAGACTGTCACATATGGACTAAAAATAGCTGC CGAACATTGTGTCATTTGAGATAAATTGTATCTATAGATCTCTGTACCAG TTGTAACCAATCCATAAAGTCTACTTAAGTCTGTTGAAGCTGTATGAGGA GTAATTCACTCATACAATCGAAAACGTTGTATTAGATATAGCCTAGCTGT ACGCAATTTGTCAGCAAATATAAACAGATGTTAAAAGAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PrBP-RA | 1140 | PrBP-RA | 2..1140 | 2..1140 | 5680 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8683703..8684838 | 1137..2 | 5665 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8684815..8685953 | 1140..2 | 5680 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8684815..8685953 | 1140..2 | 5680 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 597..679 | 784..862 | 116 | 65.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8683703..8684838 | 1..1137 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9296-RA | 1..456 | 152..607 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PrBP-RA | 1..456 | 152..607 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PrBP-RA | 1..456 | 152..607 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9296-RA | 1..456 | 152..607 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PrBP-RA | 1..456 | 152..607 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9296-RA | 2..1137 | 2..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PrBP-RA | 2..1137 | 2..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PrBP-RA | 2..1133 | 1..1132 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9296-RA | 2..1137 | 2..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PrBP-RA | 2..1133 | 1..1132 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8684818..8685953 | 1..1137 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8684818..8685953 | 1..1137 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8684818..8685953 | 1..1137 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8684818..8685953 | 1..1137 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8684818..8685953 | 1..1137 | 99 | Minus |
Translation from 151 to 606
> RH62806.pep MGSDDQSAGDRIQKGFQINYMILRDADSGKIIWQENKDFSAPDQEHEARV PVKILDMRAVSREINFSTIESMENFRLDQKVLFKGRIMEEWFFEMGFVGA NTTNTWQSTIEAAPESQMMPAKVLNGNVTIQTSFYDNETLITKSVVRLYY I*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14360-PA | 151 | GF14360-PA | 1..151 | 1..151 | 792 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24057-PA | 151 | GG24057-PA | 1..151 | 1..151 | 801 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10462-PA | 151 | GH10462-PA | 1..151 | 1..151 | 776 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PrBP-PA | 151 | CG9296-PA | 1..151 | 1..151 | 779 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18057-PA | 151 | GI18057-PA | 1..151 | 1..151 | 777 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26220-PA | 151 | GL26220-PA | 1..151 | 1..151 | 784 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21678-PA | 151 | GA21678-PA | 1..151 | 1..151 | 784 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12770-PA | 151 | GM12770-PA | 1..151 | 1..151 | 800 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22388-PA | 151 | GD22388-PA | 1..151 | 1..151 | 805 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16426-PA | 151 | GJ16426-PA | 1..151 | 1..151 | 781 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18665-PA | 151 | GK18665-PA | 1..151 | 1..151 | 776 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10828-PA | 151 | GE10828-PA | 1..151 | 1..151 | 805 | 100 | Plus |
Translation from 151 to 606
> RH62806.hyp MGSDDQSAGDRIQKGFQINYMILRDADSGKIIWQENKDFSAPDQEHEARV PVKILDMRAVSREINFSTIESMENFRLDQKVLFKGRIMEEWFFEMGFVGA NTTNTWQSTIEAAPESQMMPAKVLNGNVTIQTSFYDNETLITKSVVRLYY I*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PrBP-PA | 151 | CG9296-PA | 1..151 | 1..151 | 779 | 100 | Plus |