Clone RH63124 Report

Search the DGRC for RH63124

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:631
Well:24
Vector:pFlc-1
Associated Gene/TranscriptGlut4EF-RE
Protein status:RH63124.pep: gold
Sequenced Size:2606

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32469 2002-12-11 Blastp of sequenced clone
CG34360 2008-04-29 Release 5.5 accounting
CG34360 2008-08-15 Release 5.9 accounting
CG34360 2008-12-18 5.12 accounting

Clone Sequence Records

RH63124.complete Sequence

2606 bp (2606 high quality bases) assembled on 2002-12-11

GenBank Submission: BT003179

> RH63124.complete
GATTCTTTAAAGCGCGCGCGAACCTTTCGCACCAACAGACCGCAGATACA
AAGATACAAAAATTCGCAAAACACTGAAAATTCGCAAGACCGAAAATCGC
AAAAAGTAACTGCAAAGCAAGCTAACCGAGTGGAAAAGCAAATAGCCCGG
GCAGCCGAAAAGTGCAAGTGAAGTGCGAAGTGTCGAGTGTGGAGTGTGGA
GAGTGGAGTTCTGAGTTTCACCACTGCCAACTTACCAGAGATATAAAATA
AAAACAAATTAGGAACGACGGAGGCCTAGTGGCCCAAATTCAGAACGGCA
AAATCAGAAAGCAGAGAAGATCAAGCGAAAATTTGAATAATTAAAAATAA
ACACGCGCCGTGCGAGAGAGTGTGAGTGTGCGTGCCGTGTATCCGTCAGA
TACGCAAAGCAAAGCATAAGCAAATCGCTGACGTATTTTCCCCCGAATAC
CGTTATATAGCCGGCCGGCTTTTTGTGCCCAATTAACGCACATTCAACAA
ATTGCCCAGACGCGAAAAACAAATTGTAACATTGTATCGGAATATCGAAT
TAAAGCCCAGTGTATCCATCCACCCGTAATAAATTGAAGCAAAAAATAAA
AAAGAACAGAAACAACATAAAACCGAAAAGGGAAACCATACACTTACCTT
TCGTCTCATTTAATTTCGTTGCGGTTCGTTCTGGTGCAGTGTAATAGAGA
AAAGTTTATAAATAAAATATACAATATACAAATAACTGAATGCAGATGTT
TGGCATAATAAGTGTCACAATCAATTGCTAAGCGGCGAGATCTTGAAAAA
TACGCTAAAAGGAACCCATTGAGCTGAAGAAGCGACTGGAGGAAGTGCGT
CTGCTGGAATCGCGACGCTCCGCCCGTCTGGCAGACCAGGATCGCGACAC
GGACTTTGCCAGACTCGCCGACATGAGTGGCGAACGCCGCAGAACCACCA
CACACAGTATTGAGGTGCCATCGCAGCTGACGGCGCAGCACAATTCCCGG
AAACGTCCGCCCAGCGATCACCAGGACTACGGCAACTATCTGGAAACATG
CCGTGCCGCCGAGATTCTGTCATCGATGAAGTTGCAGAGTCCGCATGGCT
CAATGGCCGACAAGTGCTCGAGTCCCGGCAGCAGCTCTTCGGCTTCCTGG
AGCTCCGGTTCCCCGTCGCCGCCATTGAGTGACGACGGCCACGCCCACCA
CAGCCCACACAATATCATGTCGCCCCACGATGCGGACAACGCACGCACAC
GCACAGCATCCGTGTCCACGTCGGACGAGGGCATTGTCATCGACTACAAG
GAGGAGCGCAAGAAAAAGGTGGGTGATTCGATCTAAGGCCCCAACATCTA
GATATAAGAAACATATAGAGATTGGTGTACAAGAATGCGGTCAGAAGAAT
CTGGGCTAACGGCGGTGGAGCGTGACATTTTGTTGCATTTTAATTGCAAC
TTTGTGTATAGATTTTAATTGCTATAATTATGTAAATGTCGGTCTGTTCT
TGGCACGGCCACACGGCGTATGCTTGATGCCCAATACTCATACGCAATGT
AGCGCTGCTGCTGCCGGCGAAAGAATACAGAATATATAGAATATCAAATA
AATGTCGACAATGATTCAAGCACAGGAGAATGGCAACGCATCAATCACAC
AAAAGGGCAATGTCAGCAGCTCGTTAACTTGTCAAACACACAGACACACA
CAAACACACACACCGCACACACGGCGAAATCCAACAAAATCAATAACCCC
CAGCCATACGATACCGATTTTCAGGCATACTCCGAGAGTTCTAGCTCTTT
AATTAATTATGTTTGAACTTTAAGGGTCTCAGACCGAGAAACCGAAACAA
CCGAAACTTACGCAACTGAAAACCAGCACGGAAACGAACAGCAACGCCCC
CATCCAGAAAACTTCTGCCCGTCTGCCTTTTGTTTGCCCAACTAGTTACG
CTTTCTCACCCGCTCGTGTGTTTGGCTATTTCGTTTAGAGCTTTTAAGGG
CTCTTAATAGCAAACAAACAAAAACCTAAAAAACGAGCAGCCGGCAACGA
CAGAAATAACAACAACCATAGCCGAGTACAAATATCAAAGTGAGCAGCAG
CCGCGGTAGAATATGTTAACCTTGAAAGTCTGATTAGATTTTCATATGGT
GGCTATATGTTTTATTTACACAACGTCAAGCCCAAAGCAACAACGAAAAA
ATAATACACTTGACCAAAAGAGTTTGATTGGTATATTTTATATTGGAAAA
TATTCAACACTTGATCCATGATGTAAATCATTTAAATATATTCAGCCCAT
CAGATTGCTGTTTAGAATATACAATGACCATTGCCCCCAACCCATATGAT
TCATACCTAGGGCGTTGAGTCTATTGACTTGATAAATAAGGATTGGAAAT
TTACCGGACTCCCCATAGCGACTTAACTTCTCGCCCAAGTCCAATCAATT
TTCCACTCGTTTCAATTAGTCAAACGTTTTCGAATCTTGCTGCCAGCAAT
TGCACTTTCACTTTTCATATACCTGTTGCACAACCGAGCCGAAAAAGCTG
ACCAAAGCGTCAAACTTCCTGTTCCGTTCGTCTACAAAAGAAAAAAAAAA
AAAAAA

RH63124.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:29:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG34360-RE 2613 CG34360-RE 25..2613 2..2590 12930 99.9 Plus
CG34360-RC 3431 CG34360-RC 1924..3429 1101..2606 7515 99.9 Plus
CG34360-RB 3638 CG34360-RB 25..1341 2..1318 6570 99.9 Plus
CG34360-RC 3431 CG34360-RC 1544..1834 810..1100 1455 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:58:17
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5769413..5770902 1101..2590 7375 99.7 Plus
chr3R 27901430 chr3R 5754645..5755455 2..812 4040 99.9 Plus
chr3R 27901430 chr3R 5756090..5756273 810..993 920 100 Plus
chr3R 27901430 chr3R 5769217..5769323 994..1100 520 99.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:36:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:58:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9943677..9945182 1101..2606 7515 99.9 Plus
3R 32079331 3R 9928917..9929727 2..812 4040 99.9 Plus
3R 32079331 3R 9930362..9930545 810..993 920 100 Plus
3R 32079331 3R 9943481..9943587 994..1100 535 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9684508..9686013 1101..2606 7515 99.9 Plus
3R 31820162 3R 9669748..9670558 2..812 4040 99.8 Plus
3R 31820162 3R 9671193..9671376 810..993 920 100 Plus
3R 31820162 3R 9684312..9684418 994..1100 535 100 Plus
Blast to na_te.dros performed 2019-03-15 22:58:15
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker2 7672 Stalker2 STALKER2 7672bp 4857..4895 1206..1245 116 80 Plus

RH63124.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:59:19 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5754644..5755454 1..811 99 -> Plus
chr3R 5756092..5756273 812..993 100 -> Plus
chr3R 5769217..5769323 994..1100 99 -> Plus
chr3R 5769413..5770902 1101..2590 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:06:26 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RD 548..1069 810..1334 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:00:51 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RD 548..1069 810..1334 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:24:16 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RD 548..1069 810..1334 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:51:22 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RD 548..1069 810..1334 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:15:42 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RD 548..1069 810..1334 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:06:26 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RE 1..2589 2..2590 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:00:51 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RE 1..2589 2..2590 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:24:16 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RE 1..2589 2..2590 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:51:23 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RE 1..2589 2..2590 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:15:42 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RE 1..2589 2..2590 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:59:19 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9928916..9929726 1..811 99 -> Plus
3R 9930364..9930545 812..993 100 -> Plus
3R 9943481..9943587 994..1100 100 -> Plus
3R 9943677..9945166 1101..2590 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:59:19 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9928916..9929726 1..811 99 -> Plus
3R 9930364..9930545 812..993 100 -> Plus
3R 9943481..9943587 994..1100 100 -> Plus
3R 9943677..9945166 1101..2590 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:59:19 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9928916..9929726 1..811 99 -> Plus
3R 9930364..9930545 812..993 100 -> Plus
3R 9943481..9943587 994..1100 100 -> Plus
3R 9943677..9945166 1101..2590 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:24:16 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5754638..5755448 1..811 99 -> Plus
arm_3R 5756086..5756267 812..993 100 -> Plus
arm_3R 5769203..5769309 994..1100 100 -> Plus
arm_3R 5769399..5770888 1101..2590 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:23:13 Download gff for RH63124.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9669747..9670557 1..811 99 -> Plus
3R 9671195..9671376 812..993 100 -> Plus
3R 9684312..9684418 994..1100 100 -> Plus
3R 9684508..9685997 1101..2590 100   Plus

RH63124.pep Sequence

Translation from 922 to 1335

> RH63124.pep
MSGERRRTTTHSIEVPSQLTAQHNSRKRPPSDHQDYGNYLETCRAAEILS
SMKLQSPHGSMADKCSSPGSSSSASWSSGSPSPPLSDDGHAHHSPHNIMS
PHDADNARTRTASVSTSDEGIVIDYKEERKKKVGDSI*

RH63124.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:54:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17848-PA 534 GF17848-PA 1..127 1..124 271 70.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:54:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17269-PA 533 GG17269-PA 1..124 1..124 493 93.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:54:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14145-PA 563 GH14145-PA 1..134 1..124 193 59.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:31
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-PE 137 CG34360-PE 1..137 1..137 723 100 Plus
Glut4EF-PD 361 CG34360-PD 221..355 1..135 704 98.5 Plus
Glut4EF-PF 521 CG34360-PF 1..132 1..132 699 100 Plus
Glut4EF-PB 521 CG34360-PB 1..132 1..132 699 100 Plus
Glut4EF-PH 741 CG34360-PH 221..352 1..132 699 100 Plus
Glut4EF-PA 741 CG34360-PA 221..352 1..132 699 100 Plus
Glut4EF-PG 950 CG34360-PG 221..352 1..132 699 100 Plus
Glut4EF-PC 300 CG34360-PC 221..288 1..68 320 89.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:54:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10677-PA 536 GI10677-PA 1..132 1..124 205 60.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:54:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27195-PA 514 GL27195-PA 1..132 1..125 298 69.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:54:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30116-PD 159 GA30116-PD 1..140 1..133 335 70.1 Plus
Dpse\GA30116-PC 411 GA30116-PC 233..392 1..133 327 62.1 Plus
Dpse\GA30116-PE 764 GA30116-PE 250..381 1..125 301 69.9 Plus
Dpse\GA30116-PB 477 GA30116-PB 1..130 1..123 288 70.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:54:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23848-PA 518 GM23848-PA 1..132 1..132 659 96.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:54:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18656-PA 519 GD18656-PA 1..132 1..132 659 96.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:54:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23029-PA 587 GJ23029-PA 42..174 1..124 184 59.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:54:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12758-PA 188 GK12758-PA 1..135 1..133 308 69.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25999-PA 527 GE25999-PA 1..124 1..124 485 93.5 Plus

RH63124.hyp Sequence

Translation from 922 to 1335

> RH63124.hyp
MSGERRRTTTHSIEVPSQLTAQHNSRKRPPSDHQDYGNYLETCRAAEILS
SMKLQSPHGSMADKCSSPGSSSSASWSSGSPSPPLSDDGHAHHSPHNIMS
PHDADNARTRTASVSTSDEGIVIDYKEERKKKVGDSI*

RH63124.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:08:33
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-PE 137 CG34360-PE 1..137 1..137 723 100 Plus
Glut4EF-PD 361 CG34360-PD 221..355 1..135 704 98.5 Plus
Glut4EF-PF 521 CG34360-PF 1..132 1..132 699 100 Plus
Glut4EF-PB 521 CG34360-PB 1..132 1..132 699 100 Plus
Glut4EF-PH 741 CG34360-PH 221..352 1..132 699 100 Plus