BDGP Sequence Production Resources |
Search the DGRC for RH63285
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 632 |
Well: | 85 |
Vector: | pFlc-1 |
Associated Gene/Transcript | P5cr-RA |
Protein status: | RH63285.pep: gold |
Preliminary Size: | 1183 |
Sequenced Size: | 1150 |
Gene | Date | Evidence |
---|---|---|
CG6009 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6009 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6009 | 2003-08-11 | Blastp of sequenced clone |
P5cr | 2008-04-29 | Release 5.5 accounting |
P5cr | 2008-08-15 | Release 5.9 accounting |
P5cr | 2008-12-18 | 5.12 accounting |
1150 bp (1150 high quality bases) assembled on 2003-08-11
GenBank Submission: BT011084
> RH63285.complete GATGCAATCGGCAGCTGTTATTGATTAGAGGAGCGATAAAAGTCCAGCCA CCTCAAATATTGACACTAGGACAAGCTCGAGGGCCATTAAGTTATCTAAC ATCAATCAATTGCTCAAAATCATCTGGTAGGCCTGTTACTATAGCGGGCA AAGACGTCTCTAAAACCTCAAAGAGTTCCTTAAGCATGGCCAAGTTGGAC GAAAAGATCGGCTTCATCGGGGGCGGAAACATGGCCTACGCCATAGGATC CGGACTGGTGCGCTGTGGGATCGTGAAGGCTAGCCAGGTGCAGGTCTCCG GTCCCCACATTGAGAACCTGCAACGGTGGCGGGATCTGGGAGCTGTGACC TGCGACGACAACTGCATGGTCCTGGAGCACTCGGACATAGTTTTCATCTG CGTAAAGCCACACATGCTAACGCCGTGTGCCGCCCAGCTTAAATACAAGC ACGTGCCGTCGGCCAAGGATGCCAGCAAGCTGGTGGTGTCGGTTCTGGCG GGTACCAGTCTCGAAACGCTGGAGGAGGCCTTCAGCTTCATGGGCAGTTC GGAGCTGAAGGTGATACGCACCATGCCCAATACATCCATGCAGGTGGGCG AGGGCTGCACTGTTTACACTGGCAACGCACGCGTTTCGCATCACGACTTG GAAAAGATTCACCTAATGCTCAACGCCCTGGGACTGGCGCAACAGGTGCC CGAGTCCATGATCGACGCCGTTACCGGGGTAGCTGGATGCGGTCCGGCAT TTGTTTACACCATCATAGAGGCACTGGCCGATGGCGGCGTCAAACAGGGC GTTCCGCGTCAGATGGCTCTTCAGTTTGCGGCTCAGACGCTTCTGGGAGC GGCCAAAACGGTGCTGCTCACTGGAAAACATCCGGCGGTGCTGCGGGATG AAGTCTGTTCTCCCGGTGGCGCCACCATAGTAGGCGTTCATGAACTGGAA AAGGGGAACCTCAGGTCTACTTTAATAAACGCCGTGGAAAAGTCGTCACA GCGCTCTGCTGAACTGGGAAAGAAGTGAAAATGTAATCCCCCGGAACATC CCCTTGCTCTCTACACATACATATAGTTAAACGCTTGATATTGTTATTAC AATAATGACTAACATAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
P5cr-RA | 1227 | P5cr-RA | 81..1197 | 2..1118 | 5585 | 100 | Plus |
P5cr.a | 1125 | P5cr.a | 173..1107 | 184..1118 | 4675 | 100 | Plus |
Prp18-RA | 1284 | Prp18-RA | 1090..1247 | 1118..961 | 790 | 100 | Minus |
P5cr.a | 1125 | P5cr.a | 49..173 | 2..126 | 625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 14852967..14853930 | 1..964 | 99 | -> | Plus |
chr3R | 14853992..14854142 | 965..1115 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P5cr-RA | 1..843 | 186..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P5cr-RA | 1..843 | 186..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P5cr-RA | 1..843 | 186..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P5cr-RA | 1..843 | 186..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P5cr-RA | 1..843 | 186..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P5cr-RA | 48..1162 | 1..1115 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P5cr-RA | 48..1162 | 1..1115 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P5cr-RA | 48..1162 | 1..1115 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P5cr-RA | 48..1162 | 1..1115 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P5cr-RA | 54..1168 | 1..1115 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19028984..19029947 | 1..964 | 99 | -> | Plus |
3R | 19030009..19030159 | 965..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19028984..19029947 | 1..964 | 99 | -> | Plus |
3R | 19030009..19030159 | 965..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19028984..19029947 | 1..964 | 99 | -> | Plus |
3R | 19030009..19030159 | 965..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 14854706..14855669 | 1..964 | 99 | -> | Plus |
arm_3R | 14855731..14855881 | 965..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18769815..18770778 | 1..964 | 99 | -> | Plus |
3R | 18770840..18770990 | 965..1115 | 100 | Plus |
Translation from 2 to 1027
> RH63285.hyp CNRQLLLIRGAIKVQPPQILTLGQARGPLSYLTSINCSKSSGRPVTIAGK DVSKTSKSSLSMAKLDEKIGFIGGGNMAYAIGSGLVRCGIVKASQVQVSG PHIENLQRWRDLGAVTCDDNCMVLEHSDIVFICVKPHMLTPCAAQLKYKH VPSAKDASKLVVSVLAGTSLETLEEAFSFMGSSELKVIRTMPNTSMQVGE GCTVYTGNARVSHHDLEKIHLMLNALGLAQQVPESMIDAVTGVAGCGPAF VYTIIEALADGGVKQGVPRQMALQFAAQTLLGAAKTVLLTGKHPAVLRDE VCSPGGATIVGVHELEKGNLRSTLINAVEKSSQRSAELGKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
P5cr-PA | 280 | CG6009-PA | 1..280 | 62..341 | 1428 | 100 | Plus |
P5cr-2-PA | 273 | CG5840-PA | 6..271 | 68..341 | 454 | 35.9 | Plus |
P5cr-2-PD | 252 | CG5840-PD | 24..250 | 105..341 | 393 | 35.4 | Plus |
P5cr-2-PC | 252 | CG5840-PC | 24..250 | 105..341 | 393 | 35.4 | Plus |
P5cr-2-PB | 174 | CG5840-PB | 2..172 | 167..341 | 322 | 37.7 | Plus |
Translation from 185 to 1027
> RH63285.pep MAKLDEKIGFIGGGNMAYAIGSGLVRCGIVKASQVQVSGPHIENLQRWRD LGAVTCDDNCMVLEHSDIVFICVKPHMLTPCAAQLKYKHVPSAKDASKLV VSVLAGTSLETLEEAFSFMGSSELKVIRTMPNTSMQVGEGCTVYTGNARV SHHDLEKIHLMLNALGLAQQVPESMIDAVTGVAGCGPAFVYTIIEALADG GVKQGVPRQMALQFAAQTLLGAAKTVLLTGKHPAVLRDEVCSPGGATIVG VHELEKGNLRSTLINAVEKSSQRSAELGKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18595-PA | 280 | GF18595-PA | 1..280 | 1..280 | 1345 | 89.6 | Plus |
Dana\GF16410-PA | 273 | GF16410-PA | 6..271 | 7..280 | 466 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23118-PA | 280 | GG23118-PA | 1..280 | 1..280 | 1354 | 90.7 | Plus |
Dere\GG22275-PA | 273 | GG22275-PA | 6..271 | 7..280 | 456 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18149-PA | 280 | GH18149-PA | 1..280 | 1..280 | 1267 | 84.3 | Plus |
Dgri\GH13554-PA | 273 | GH13554-PA | 6..268 | 7..277 | 482 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
P5cr-PA | 280 | CG6009-PA | 1..280 | 1..280 | 1428 | 100 | Plus |
P5cr-2-PA | 273 | CG5840-PA | 6..271 | 7..280 | 454 | 35.9 | Plus |
P5cr-2-PD | 252 | CG5840-PD | 24..250 | 44..280 | 393 | 35.4 | Plus |
P5cr-2-PC | 252 | CG5840-PC | 24..250 | 44..280 | 393 | 35.4 | Plus |
P5cr-2-PB | 174 | CG5840-PB | 2..172 | 106..280 | 322 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23448-PA | 280 | GI23448-PA | 1..280 | 1..280 | 1281 | 84.6 | Plus |
Dmoj\GI24792-PA | 273 | GI24792-PA | 6..271 | 7..280 | 450 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13575-PA | 280 | GL13575-PA | 1..280 | 1..280 | 1311 | 87.1 | Plus |
Dper\GL23580-PA | 258 | GL23580-PA | 1..258 | 16..280 | 418 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19292-PA | 280 | GA19292-PA | 1..280 | 1..280 | 1311 | 87.1 | Plus |
Dpse\GA19170-PA | 272 | GA19170-PA | 6..268 | 7..277 | 474 | 38.5 | Plus |
Dpse\GA28081-PA | 180 | GA28081-PA | 7..95 | 60..148 | 385 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23296-PA | 280 | GM23296-PA | 1..280 | 1..280 | 1453 | 97.5 | Plus |
Dsec\GM15240-PA | 273 | GM15240-PA | 6..271 | 7..280 | 456 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19166-PA | 273 | GD19166-PA | 6..271 | 7..280 | 451 | 35.4 | Plus |
Dsim\GD19267-PA | 71 | GD19267-PA | 1..71 | 210..280 | 358 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23775-PA | 280 | GJ23775-PA | 1..280 | 1..280 | 1301 | 86.4 | Plus |
Dvir\GJ24440-PA | 273 | GJ24440-PA | 6..251 | 7..260 | 453 | 39.5 | Plus |