BDGP Sequence Production Resources |
Search the DGRC for RH63449
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 634 |
Well: | 49 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13108-RA |
Protein status: | RH63449.pep: gold |
Preliminary Size: | 702 |
Sequenced Size: | 1037 |
Gene | Date | Evidence |
---|---|---|
CG13108 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13108 | 2002-03-28 | Blastp of sequenced clone |
CG13108 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13108 | 2008-04-29 | Release 5.5 accounting |
CG13108 | 2008-08-15 | Release 5.9 accounting |
CG13108 | 2008-12-18 | 5.12 accounting |
1037 bp (1037 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094947
> RH63449.complete GAGCTTTGAGACGCAGCAGCCACAGCAGCAGCAAAAGCAGCAGCAGCAGC CGCTGCAGGATTTAGCGGTCGGTTCAACCAGGAGCAGCAGGAGTAGAGAA TTTTCGCGTCAGAATGCGAAGTCGCACGGAACTGGTGACCACCACTTTCG AGGAGAGCGACGAGGATGATTTCAGTCCGGACGATTCCGACTCCGAGGAG GACTGGCGACCCACCAAGAAACGTCCGTCCAAGCCATCTGGCTCCGATGG CGGCAGGAAGCGGAAATCGGCGGCAGCCAATGCCTCGAAGGCCAAGCGCC GGATGGCCAAGGTGAGCGACGAGGAGTCCGACGAAGAGGATGACCTAGAA ACCGATCCCAGCGACGACGACTTTGACTACCCGTCGGCCAGCACTTCAAA GCGACCCCAGAGTCTGCCGCCCAAGAAGCAATTTGTTAAGTTAAGCCAAC TGGATTTGCTGGTAAAAAAGTCTGATCTTATGGAAAACGACTGGCTAAAG AACAATCGCTTGTGTCTGTGGCGCAAAGATGAACAAACGAATCTGCTTCA GAAGTATCTGCGGGTCAAGTCGGCTGCCGAGGAGGAGGAGCTGCTCTTTA CCTCCAGTTCTGTATATTCCAGTTGGGATGATCAGCAGACGAGCGACTTC ATAGAGGTCAAAGTCAACTGCTTGGATCCCAACAACAGACGTATTAAACT GCACGATCTGGAGGCGATTAAGAAAATCTCCGTGGAACTACAATCAGAGC GAAATAAGAAAACGACATCGGACAAAGAAGATACTTTGGAGGCGGAGGAG GATAAGCAAAATTAAGCTGATTCTTAAAAAAAAAACAACTACTAATTATA CACAAAACTAACATTTTCATTAGTATTTACAACTAGTTGGCCAAGTTAGG GTTAAACAACAAATTTCCTTGTAACAGCTATGTGAAAACAGCATTAAATT TAATTTAGAAAATTAAAGAAACTAAGAAAAAAAAAGGAAATCAAAAGGAA AACATTTGAAAATATCAAACTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13108-RA | 1099 | CG13108-RA | 80..1097 | 2..1019 | 5090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 9163209..9163759 | 64..614 | 98 | -> | Plus |
chr2L | 9163931..9164333 | 615..1021 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13108-RA | 1..702 | 114..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13108-RA | 1..702 | 114..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13108-RA | 1..702 | 114..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13108-RA | 1..702 | 114..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13108-RA | 1..702 | 114..815 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13108-RA | 2..1020 | 2..1021 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13108-RA | 2..1020 | 2..1021 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13108-RA | 2..1020 | 2..1021 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13108-RA | 2..1020 | 2..1021 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13108-RA | 2..1020 | 2..1021 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9164235..9164848 | 1..614 | 99 | -> | Plus |
2L | 9165020..9165425 | 615..1021 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9164235..9164848 | 1..614 | 99 | -> | Plus |
2L | 9165020..9165425 | 615..1021 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9164235..9164848 | 1..614 | 99 | -> | Plus |
2L | 9165020..9165425 | 615..1021 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 9164235..9164848 | 1..614 | 99 | -> | Plus |
arm_2L | 9165020..9165425 | 615..1021 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9164235..9164848 | 1..614 | 99 | -> | Plus |
2L | 9165020..9165425 | 615..1021 | 99 | Plus |
Translation from 113 to 814
> RH63449.hyp MRSRTELVTTTFEESDEDDFSPDDSDSEEDWRPTKKRPSKPSGSDGGRKR KSAAANASKAKRRMAKVSDEESDEEDDLETDPSDDDFDYPSASTSKRPQS LPPKKQFVKLSQLDLLVKKSDLMENDWLKNNRLCLWRKDEQTNLLQKYLR VKSAAEEEELLFTSSSVYSSWDDQQTSDFIEVKVNCLDPNNRRIKLHDLE AIKKISVELQSERNKKTTSDKEDTLEAEEDKQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13108-PA | 233 | CG13108-PA | 1..233 | 1..233 | 1200 | 100 | Plus |
Translation from 113 to 814
> RH63449.pep MRSRTELVTTTFEESDEDDFSPDDSDSEEDWRPTKKRPSKPSGSDGGRKR KSAAANASKAKRRMAKVSDEESDEEDDLETDPSDDDFDYPSASTSKRPQS LPPKKQFVKLSQLDLLVKKSDLMENDWLKNNRLCLWRKDEQTNLLQKYLR VKSAAEEEELLFTSSSVYSSWDDQQTSDFIEVKVNCLDPNNRRIKLHDLE AIKKISVELQSERNKKTTSDKEDTLEAEEDKQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22711-PA | 246 | GF22711-PA | 1..228 | 1..219 | 742 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25334-PA | 248 | GG25334-PA | 1..225 | 1..223 | 959 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13269-PA | 272 | GH13269-PA | 1..264 | 1..231 | 576 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13108-PA | 233 | CG13108-PA | 1..233 | 1..233 | 1200 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17465-PA | 330 | GI17465-PA | 1..248 | 1..210 | 570 | 57.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26247-PA | 287 | GL26247-PA | 1..220 | 1..215 | 666 | 65.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12049-PA | 287 | GA12049-PA | 1..220 | 1..215 | 658 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17413-PA | 237 | GM17413-PA | 1..233 | 1..233 | 1151 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23590-PA | 247 | GD23590-PA | 1..224 | 1..224 | 1128 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14451-PA | 282 | GJ14451-PA | 1..243 | 1..212 | 625 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15069-PA | 284 | GK15069-PA | 1..247 | 1..230 | 740 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18828-PA | 237 | GE18828-PA | 1..233 | 1..233 | 1046 | 93.1 | Plus |