BDGP Sequence Production Resources |
Search the DGRC for RH63657
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 636 |
Well: | 57 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14868-RA |
Protein status: | RH63657.pep: gold |
Preliminary Size: | 1557 |
Sequenced Size: | 1853 |
Gene | Date | Evidence |
---|---|---|
CG14868 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14868 | 2002-06-10 | Blastp of sequenced clone |
CG14868 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14868 | 2008-04-29 | Release 5.5 accounting |
CG14868 | 2008-08-15 | Release 5.9 accounting |
CG14868 | 2008-12-18 | 5.12 accounting |
1853 bp (1853 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121711
> RH63657.complete GATTCACTCTAGCTGTGTGTTTTGGAACAGAATGGGGTCCTTGGAGCCCG AGAAAGTGTGATACAGCTGGCTCCTCCGGACAGCCCTCAGTTTACAATCA CTGTCAATGTCAACATCTCGAGCTCGGCAAACGGAAAACCCACTCAAGCA TTCGGCATGGACTTGGACGATGTGGCTAGTCATCACGGATTCGGTCAACA TATGGCCACGTACAATGTAGAGACCTCGGCGGTGCACAGGAAACTTCAAA GCAAGGTGGAGGCACTTCGAATCCTGCGCCAGGAGCTGGAACAGTTTCGC GTGGAGCGAGACCAGTACAAGCTGGTGGCGGAGACCCTGCAGCTGCGCTA CTCCGCGCTGAAGAGTAATAGCGAACTTCTGGCTGTCGGTGGATGTGGAG CCCTCAGCGAGAACTCCAGCCTGGCAGCCCTGCTCCACGAGACGCGCGAG CAGAACCTAAAGCTCAGCACCGAAGTGGAAGCCCTGAGGCAGCGGCTCAA CGAGCTGCATGGCGACATGGAACTACTCCGGGAGACGGAGGCCAGCAACA AGTCGCGGGTACAGGCAATGGCCAGCGAGAATGCCGCTCGCAACAAGGAG GAGCTGCAGTGGCGTCGTGAGCGGGCAAACTTTATCTGCCACCTGGAGGG CCTCAAAAAAAGGAATGCCCAGCTGGCCTTCGACCTGAAGGCGGTGATCG ATGAGAAGGAGGAGCTGATAACCGAGCGGGATGCCTACAAGTGCAAGGCA CACCGCCTAAATCATGAACTCTTTGTGGCCCTCAGGGCGAAGAAAACGCA TCCAAGGCTCCTGGACATCGATGGTGTTTTGCTGGAGAACAAGTACCTGC ATGAACGTGTGAAGATCCAAGACAGCGAACTGGAGCTCACCAAACAGAGC ATCAATAAGTACAAGACAATGTTGGATGCAAAACGAAAGAAGGGAATTGT AAAACTTGGCGGTGGGAGCACAAATGAGGACACCATTCTAAGCCCCCGGC AAGTGAAAACAATCCTCGAGAGTGGCATTGAGCTGCCTCAGAAAACCGAG AGCTTAAGCGATCTAAAATCCTTGTGTCTGGCCCTGCTGGACAATCTCAA CGACAAGAACTTGGCCCTGACGCACCAAAAGAAGACCAACAAAATACTGG CTGGCAAAATGACGGAGCTGGAGCAGCGGTGGCAACAACTCCTCTCCGGA AACGATGACAACGCAGAGGAGCAGGAGGAGGACGTGGAATATGGTTATGC GCCTTCGCAGCTGCTCCTCAATGGCTATTGTGCCGCCATGGTAGATGACG CCGACATCAGCAGCACTCCGTCCATTGAGCCAGATAACGAAGGCGTCGCC ATTACAGCGGATCATGAAGATTCAAAGAAGCACAAGTCCGTTGAGGCTCT GCATTCCGACGATGGAATGTCCTCGCTTTCAACGGAGTCCGTGGATTCGT CTGTGTACGGTGCAGATGTGCAGCCCGATGACTTCCAAAAGTCTTCATCC GCCACAACAGATTCGGGCAACTGTGGATTGAGCAGCCGCTGCAACGGCAC GCCACGAATATCCAGTGCAGTGGCACGGGAACGTATGGAGGATCTGAAGG ACCTGCCGCCTCACCTGGCCACTCTGGTCCAGAAAGCACTTCACGATCTG GACATGCGGGACTACGAGGCTATGGTGACGATACGAGCAGAGAATCTGGC GGCTATTCCTTAGAGAAAAACTAGTTCAATTGAGGACTCCCAAAGAAATG GATGAAACCATATCTCAGTGTTGACAAAAGATATAATACATATATATATT ACCGCAACAGCGTACAATAAAACCAGATTATATAAAAGAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11192447..11193141 | 1837..1143 | 3475 | 100 | Minus |
chr3R | 27901430 | chr3R | 11193703..11194287 | 805..221 | 2925 | 100 | Minus |
chr3R | 27901430 | chr3R | 11194348..11194569 | 222..1 | 1110 | 100 | Minus |
chr3R | 27901430 | chr3R | 11193198..11193338 | 1142..1002 | 705 | 100 | Minus |
chr3R | 27901430 | chr3R | 11193541..11193649 | 915..807 | 530 | 99.1 | Minus |
chr3R | 27901430 | chr3R | 11193395..11193484 | 1003..914 | 450 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15367808..15368506 | 1841..1143 | 3480 | 99.9 | Minus |
3R | 32079331 | 3R | 15369066..15369652 | 807..221 | 2935 | 100 | Minus |
3R | 32079331 | 3R | 15369713..15369934 | 222..1 | 1110 | 100 | Minus |
3R | 32079331 | 3R | 15368563..15368703 | 1142..1002 | 705 | 100 | Minus |
3R | 32079331 | 3R | 15368906..15369014 | 915..807 | 545 | 100 | Minus |
3R | 32079331 | 3R | 15368760..15368849 | 1003..914 | 450 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15108639..15109337 | 1841..1143 | 3480 | 99.8 | Minus |
3R | 31820162 | 3R | 15109897..15110483 | 807..221 | 2935 | 100 | Minus |
3R | 31820162 | 3R | 15110544..15110765 | 222..1 | 1110 | 100 | Minus |
3R | 31820162 | 3R | 15109394..15109534 | 1142..1002 | 705 | 100 | Minus |
3R | 31820162 | 3R | 15109737..15109845 | 915..807 | 545 | 100 | Minus |
3R | 31820162 | 3R | 15109591..15109680 | 1003..914 | 450 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11194348..11194569 | 1..222 | 100 | Minus | |
chr3R | 11192446..11193141 | 1143..1838 | 99 | <- | Minus |
chr3R | 11193198..11193336 | 1004..1142 | 100 | <- | Minus |
chr3R | 11193395..11193482 | 916..1003 | 100 | <- | Minus |
chr3R | 11193541..11193648 | 808..915 | 99 | <- | Minus |
chr3R | 11193701..11194285 | 223..807 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14868-RA | 1..1557 | 157..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14868-RA | 1..1557 | 157..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14868-RA | 1..1557 | 157..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14868-RA | 1..1557 | 157..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14868-RA | 1..1557 | 157..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14868-RA | 1..1713 | 1..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14868-RA | 1..1833 | 1..1833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14868-RA | 12..1844 | 1..1833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14868-RA | 1..1713 | 1..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14868-RA | 12..1844 | 1..1833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15368906..15369013 | 808..915 | 100 | <- | Minus |
3R | 15367811..15368506 | 1143..1838 | 99 | <- | Minus |
3R | 15368563..15368701 | 1004..1142 | 100 | <- | Minus |
3R | 15368760..15368847 | 916..1003 | 100 | <- | Minus |
3R | 15369066..15369650 | 223..807 | 100 | <- | Minus |
3R | 15369713..15369934 | 1..222 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15368906..15369013 | 808..915 | 100 | <- | Minus |
3R | 15367811..15368506 | 1143..1838 | 99 | <- | Minus |
3R | 15368563..15368701 | 1004..1142 | 100 | <- | Minus |
3R | 15368760..15368847 | 916..1003 | 100 | <- | Minus |
3R | 15369066..15369650 | 223..807 | 100 | <- | Minus |
3R | 15369713..15369934 | 1..222 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15368906..15369013 | 808..915 | 100 | <- | Minus |
3R | 15367811..15368506 | 1143..1838 | 99 | <- | Minus |
3R | 15368563..15368701 | 1004..1142 | 100 | <- | Minus |
3R | 15368760..15368847 | 916..1003 | 100 | <- | Minus |
3R | 15369066..15369650 | 223..807 | 100 | <- | Minus |
3R | 15369713..15369934 | 1..222 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11193533..11194228 | 1143..1838 | 99 | <- | Minus |
arm_3R | 11194285..11194423 | 1004..1142 | 100 | <- | Minus |
arm_3R | 11194482..11194569 | 916..1003 | 100 | <- | Minus |
arm_3R | 11194628..11194735 | 808..915 | 100 | <- | Minus |
arm_3R | 11194788..11195372 | 223..807 | 100 | <- | Minus |
arm_3R | 11195435..11195656 | 1..222 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15108642..15109337 | 1143..1838 | 99 | <- | Minus |
3R | 15109394..15109532 | 1004..1142 | 100 | <- | Minus |
3R | 15109591..15109678 | 916..1003 | 100 | <- | Minus |
3R | 15109737..15109844 | 808..915 | 100 | <- | Minus |
3R | 15109897..15110481 | 223..807 | 100 | <- | Minus |
3R | 15110544..15110765 | 1..222 | 100 | Minus |
Translation from 156 to 1712
> RH63657.pep MDLDDVASHHGFGQHMATYNVETSAVHRKLQSKVEALRILRQELEQFRVE RDQYKLVAETLQLRYSALKSNSELLAVGGCGALSENSSLAALLHETREQN LKLSTEVEALRQRLNELHGDMELLRETEASNKSRVQAMASENAARNKEEL QWRRERANFICHLEGLKKRNAQLAFDLKAVIDEKEELITERDAYKCKAHR LNHELFVALRAKKTHPRLLDIDGVLLENKYLHERVKIQDSELELTKQSIN KYKTMLDAKRKKGIVKLGGGSTNEDTILSPRQVKTILESGIELPQKTESL SDLKSLCLALLDNLNDKNLALTHQKKTNKILAGKMTELEQRWQQLLSGND DNAEEQEEDVEYGYAPSQLLLNGYCAAMVDDADISSTPSIEPDNEGVAIT ADHEDSKKHKSVEALHSDDGMSSLSTESVDSSVYGADVQPDDFQKSSSAT TDSGNCGLSSRCNGTPRISSAVARERMEDLKDLPPHLATLVQKALHDLDM RDYEAMVTIRAENLAAIP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16705-PA | 519 | GF16705-PA | 1..519 | 1..518 | 2355 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20574-PA | 518 | GG20574-PA | 1..518 | 1..518 | 2683 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18405-PA | 548 | GH18405-PA | 36..547 | 12..517 | 1942 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14868-PA | 518 | CG14868-PA | 1..518 | 1..518 | 2615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24308-PA | 539 | GI24308-PA | 27..536 | 10..517 | 1878 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23062-PA | 681 | GL23062-PA | 164..675 | 1..490 | 2066 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27129-PB | 540 | GA27129-PB | 1..538 | 1..517 | 2217 | 81.2 | Plus |
Dpse\GA24050-PA | 871 | GA24050-PA | 331..869 | 1..517 | 2201 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25774-PA | 167 | GM25774-PA | 1..148 | 1..148 | 745 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15100-PA | 278 | GD15100-PA | 9..276 | 15..282 | 1337 | 96.3 | Plus |
Dsim\GD20352-PA | 261 | GD20352-PA | 21..261 | 278..518 | 1219 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10391-PA | 552 | GJ10391-PA | 35..551 | 12..517 | 1971 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11438-PA | 541 | GK11438-PA | 21..540 | 12..517 | 2036 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26379-PA | 518 | GE26379-PA | 1..518 | 1..518 | 2687 | 97.7 | Plus |
Translation from 156 to 1712
> RH63657.hyp MDLDDVASHHGFGQHMATYNVETSAVHRKLQSKVEALRILRQELEQFRVE RDQYKLVAETLQLRYSALKSNSELLAVGGCGALSENSSLAALLHETREQN LKLSTEVEALRQRLNELHGDMELLRETEASNKSRVQAMASENAARNKEEL QWRRERANFICHLEGLKKRNAQLAFDLKAVIDEKEELITERDAYKCKAHR LNHELFVALRAKKTHPRLLDIDGVLLENKYLHERVKIQDSELELTKQSIN KYKTMLDAKRKKGIVKLGGGSTNEDTILSPRQVKTILESGIELPQKTESL SDLKSLCLALLDNLNDKNLALTHQKKTNKILAGKMTELEQRWQQLLSGND DNAEEQEEDVEYGYAPSQLLLNGYCAAMVDDADISSTPSIEPDNEGVAIT ADHEDSKKHKSVEALHSDDGMSSLSTESVDSSVYGADVQPDDFQKSSSAT TDSGNCGLSSRCNGTPRISSAVARERMEDLKDLPPHLATLVQKALHDLDM RDYEAMVTIRAENLAAIP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14868-PA | 518 | CG14868-PA | 1..518 | 1..518 | 2615 | 100 | Plus |