BDGP Sequence Production Resources |
Search the DGRC for RH63749
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 637 |
Well: | 49 |
Vector: | pFlc-1 |
Associated Gene/Transcript | RpL7-like-RA |
Protein status: | RH63749.pep: gold |
Preliminary Size: | 1127 |
Sequenced Size: | 977 |
Gene | Date | Evidence |
---|---|---|
CG5317 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5317 | 2005-03-04 | Blastp of sequenced clone |
CG5317 | 2008-04-29 | Release 5.5 accounting |
CG34164 | 2008-08-15 | Release 5.9 accounting |
CG5317 | 2008-08-15 | Release 5.9 accounting |
CG5317 | 2008-12-18 | 5.12 accounting |
CG34164 | 2008-12-18 | 5.12 accounting |
977 bp (977 high quality bases) assembled on 2005-03-04
GenBank Submission: BT021218
> RH63749.complete GACTTATCGCTCCGCGCCCACCTCTATCCTTTTTAGTTATTGTTTTGGTG CTTGCACGTGTTTTAATTTACTTCGATTAAAAAGCCAAATACCAGCAATG TCAGACAAATATGCGGTGCCCAACAAATTGCCCGGCAAAACAGTGTCGGT GCTAAAGCATCGCAAGAGGAGAATTCTGCAGGATGAATCTGTTGTTACGC AGAAAAGAAATGACCGCATCAAAAAGAGAACCGCCACCAAGAATCACCAC AAATTCCGCCGTGCCGAATCCTTCGTAATGGGCTACCTGAAAGCAGAGCG CACGTCCAAGCGGATCAAGCAAACCATTCTGCGCACCAATGTCACCGAAC AAAGTGCCAAAGCTGCCGACGATTCCAATCCCAAACTGCTCTTCGTGATG CGCCATGCGGGCAAGAAGATCTTCGACAAGACCACCGCGGATATATTCCG AACCCTGCGCATGGGCTCGCGCCACAACGCCGTCTTCATGGAGAACACCA AGGAGAACCAGTTGCTGCTGCGCGTTATCGAACCCTTTGTAGTCTACGGC AATCCCTCGCTGAGCTCCATTCGCGAGCTGGTCTTCAAGAAGGGCTTCGC CCGCATCGACGGCAAGAAGACGGCCATCCAGTCGAACACCATGGTGGAGC AACAGCTGGGCGACAAGGGTGTCATCTGTCTGGAGGATATAATCCACGAA ATTTGCACAGTGGGTCCAAACTTCGCCGCTGTAAATGAGTTTCTGTGCGC CTTCACGTTGTCCAGTCCCAGCAATGGTTGGCAAAAGAAGGTATCCGTCT CGTACAAACGCGGTGGCGAGTACGGCGATCGTGGCACTGCCATCAACGAA CTGATTGCCCGCTGCCTGTAGAGACCCTAGCCTAGTAAACCCTTAAGTGA TTGTTCAACCTCTATAACCCATTCTGTAGCTAAGCCCAATACACATCTAT ATACAAACGCAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 12055176..12055824 | 109..757 | 3245 | 100 | Plus |
chr2L | 23010047 | chr2L | 12055891..12056093 | 757..959 | 1015 | 100 | Plus |
chr2L | 23010047 | chr2L | 12055003..12055109 | 2..108 | 535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12056499..12057147 | 109..757 | 3245 | 100 | Plus |
2L | 23513712 | 2L | 12057214..12057416 | 757..959 | 1015 | 100 | Plus |
2L | 23513712 | 2L | 12056326..12056432 | 2..108 | 535 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12056499..12057147 | 109..757 | 3245 | 100 | Plus |
2L | 23513712 | 2L | 12057214..12057416 | 757..959 | 1015 | 100 | Plus |
2L | 23513712 | 2L | 12056326..12056432 | 2..108 | 535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12055001..12055109 | 1..108 | 99 | -> | Plus |
chr2L | 12055176..12055824 | 109..757 | 100 | -> | Plus |
chr2L | 12055892..12056093 | 758..960 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5317-RB | 1..774 | 98..871 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7-like-RB | 1..774 | 98..871 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7-like-RA | 1..774 | 98..871 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5317-RB | 1..774 | 98..871 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7-like-RA | 1..774 | 98..871 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5317-RB | 1..960 | 1..960 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34164-RB | 1..958 | 2..960 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7-like-RA | 1..936 | 24..959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5317-RB | 1..960 | 1..960 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL7-like-RC | 1..958 | 2..959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12056324..12056432 | 1..108 | 99 | -> | Plus |
2L | 12056499..12057147 | 109..757 | 100 | -> | Plus |
2L | 12057215..12057416 | 758..960 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12056324..12056432 | 1..108 | 99 | -> | Plus |
2L | 12056499..12057147 | 109..757 | 100 | -> | Plus |
2L | 12057215..12057416 | 758..960 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12056324..12056432 | 1..108 | 99 | -> | Plus |
2L | 12056499..12057147 | 109..757 | 100 | -> | Plus |
2L | 12057215..12057416 | 758..960 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12056324..12056432 | 1..108 | 99 | -> | Plus |
arm_2L | 12056499..12057147 | 109..757 | 100 | -> | Plus |
arm_2L | 12057215..12057416 | 758..960 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12056499..12057147 | 109..757 | 100 | -> | Plus |
2L | 12057215..12057416 | 758..960 | 99 | Plus | |
2L | 12056324..12056432 | 1..108 | 99 | -> | Plus |
Translation from 0 to 870
> RH63749.hyp TYRSAPTSILFSYCFGACTCFNLLRLKSQIPAMSDKYAVPNKLPGKTVSV LKHRKRRILQDESVVTQKRNDRIKKRTATKNHHKFRRAESFVMGYLKAER TSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKKIFDKTTADIFR TLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFA RIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNFAAVNEFLCA FTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIARCL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL7-like-PC | 257 | CG5317-PC | 1..257 | 33..289 | 1313 | 100 | Plus |
RpL7-like-PB | 257 | CG5317-PB | 1..257 | 33..289 | 1313 | 100 | Plus |
RpL7-like-PA | 257 | CG5317-PA | 1..257 | 33..289 | 1313 | 100 | Plus |
RpL7-PB | 252 | CG4897-PB | 1..250 | 30..287 | 349 | 33.3 | Plus |
RpL7-PA | 252 | CG4897-PA | 1..250 | 30..287 | 349 | 33.3 | Plus |
Translation from 97 to 870
> RH63749.pep MSDKYAVPNKLPGKTVSVLKHRKRRILQDESVVTQKRNDRIKKRTATKNH HKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFV MRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVY GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIH EICTVGPNFAAVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAIN ELIARCL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21557-PA | 257 | GF21557-PA | 1..257 | 1..257 | 1229 | 86 | Plus |
Dana\GF15749-PA | 252 | GF15749-PA | 13..252 | 10..257 | 331 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23760-PA | 257 | GG23760-PA | 1..257 | 1..257 | 1342 | 96.9 | Plus |
Dere\GG10089-PA | 252 | GG10089-PA | 13..252 | 10..257 | 334 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11571-PA | 257 | GH11571-PA | 1..257 | 1..257 | 1179 | 82.5 | Plus |
Dgri\GH11082-PA | 252 | GH11082-PA | 56..252 | 55..257 | 310 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL7-like-PC | 257 | CG5317-PC | 1..257 | 1..257 | 1313 | 100 | Plus |
RpL7-like-PB | 257 | CG5317-PB | 1..257 | 1..257 | 1313 | 100 | Plus |
RpL7-like-PA | 257 | CG5317-PA | 1..257 | 1..257 | 1313 | 100 | Plus |
RpL7-PB | 252 | CG4897-PB | 7..250 | 4..255 | 344 | 33.3 | Plus |
RpL7-PA | 252 | CG4897-PA | 7..250 | 4..255 | 344 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17062-PA | 257 | GI17062-PA | 1..257 | 1..257 | 1188 | 85.6 | Plus |
Dmoj\GI17599-PA | 252 | GI17599-PA | 56..252 | 55..257 | 319 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16173-PA | 279 | GL16173-PA | 1..241 | 1..239 | 1130 | 86.7 | Plus |
Dper\GL16367-PA | 238 | GL16367-PA | 42..234 | 55..253 | 313 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18800-PA | 257 | GA18800-PA | 1..257 | 1..257 | 1252 | 88.7 | Plus |
Dpse\GA18510-PA | 252 | GA18510-PA | 13..252 | 10..257 | 322 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26715-PA | 257 | GM26715-PA | 1..257 | 1..257 | 1353 | 97.7 | Plus |
Dsec\GM17982-PA | 252 | GM17982-PA | 13..252 | 10..257 | 339 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23812-PA | 257 | GD23812-PA | 1..257 | 1..257 | 1357 | 98.4 | Plus |
Dsim\GD23662-PA | 252 | GD23662-PA | 13..252 | 10..257 | 339 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17314-PA | 257 | GJ17314-PA | 1..257 | 1..257 | 1164 | 82.1 | Plus |
Dvir\GJ17944-PA | 252 | GJ17944-PA | 56..252 | 55..257 | 320 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21063-PA | 257 | GK21063-PA | 1..257 | 1..257 | 1194 | 85.6 | Plus |
Dwil\GK18655-PA | 252 | GK18655-PA | 13..252 | 10..257 | 327 | 31.3 | Plus |
Dwil\GK18411-PA | 252 | GK18411-PA | 13..252 | 10..257 | 327 | 31.3 | Plus |