BDGP Sequence Production Resources |
Search the DGRC for RH63812
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 638 |
Well: | 12 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14777-RB |
Protein status: | RH63812.pep: gold |
Preliminary Size: | 635 |
Sequenced Size: | 870 |
Gene | Date | Evidence |
---|---|---|
CG14777 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14777 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14777 | 2003-01-22 | Blastp of sequenced clone |
CG14777 | 2008-04-29 | Release 5.5 accounting |
CG14777 | 2008-08-15 | Release 5.9 accounting |
CG14777 | 2008-12-18 | 5.12 accounting |
870 bp (870 high quality bases) assembled on 2003-01-22
GenBank Submission: BT003441
> RH63812.complete GAGTCAGATACGAGATACGGAAGCCCAGCGAACGGAGGAGGGCGTGAGAT GCGGACGCCGTGCGTGACCACAGTACAAACTAGATTACATTAAGTTAGAC TAGCTAATCCCAAGCTGAACCCAGGCCCCTTTCCCGCCGTCTGGACCCCT CTACCCCGTCCGGAACGCTCTACGAAAGCAACATAAGTGATGGTGCCTGC GGCCGTCAAGCTGTTGCAGGCCTCGCTGGGCCAGTGGCGTCGAGGGAGCA AGCTGCATCCCATGGCCAAGGGCGCGCTCACGTACGCGGTCATGTGGCCG GCGGGCAGCCTGATCCAGCAGGCTATGGAGGGACGCAAGCTGCGCGAGTA CGACTGGGCCAGGGCGTTACGTTTCAGCTTGTTTGGAGCTCTGTACGTGG CGCCCACTCTGTACGGCTGGGTGCGGCTCACCAGCGCCATGTGGCCGCAG ACTAATCTGCGCACGGGCATCGTTAAGGCCATCACGGAACAGCTTTCCTA CGGACCATTCGCTTGCGTAAGCTTTTTCATGGGAATGAGCTTGCTGGAGC TGAAGACCTTTAGTCAGGCCGTGGAAGAGACGAAGGAGAAGGCGGCGCCC ACGTACAAGGTCGGCGTATGCATCTGGCCTATCCTGCAGACCATTAACTT CTCGCTGGTGCCGGAACACAACCGCGTGGTGTTTGTAAGCATTTGCAGCC TGATGTGGACAATTTTCCTGGCGTACATGAAGACGCACCACGAGGAGCAG TCGAACTCCGCGGTTCTGCCTTGTACATAGTTACCTGAGTCGTATTTGTT ACCTTTTGTGACTCCCAATTGTTAGGCCAATTGTTGAATTAGATAGCGGT AGCGTAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1362369..1362616 | 608..855 | 1195 | 98.8 | Plus |
chrX | 22417052 | chrX | 1360678..1360857 | 2..181 | 885 | 99.4 | Plus |
chrX | 22417052 | chrX | 1361723..1361889 | 178..344 | 805 | 98.8 | Plus |
chrX | 22417052 | chrX | 1362173..1362308 | 476..611 | 680 | 100 | Plus |
chrX | 22417052 | chrX | 1361976..1362110 | 344..478 | 675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 1468445..1468693 | 608..856 | 1230 | 99.6 | Plus |
X | 23542271 | X | 1466754..1466933 | 2..181 | 900 | 100 | Plus |
X | 23542271 | X | 1467799..1467965 | 178..344 | 820 | 99.4 | Plus |
X | 23542271 | X | 1468249..1468384 | 476..611 | 680 | 100 | Plus |
X | 23542271 | X | 1468052..1468186 | 344..478 | 675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 1476543..1476791 | 608..856 | 1230 | 99.5 | Plus |
X | 23527363 | X | 1474852..1475031 | 2..181 | 900 | 100 | Plus |
X | 23527363 | X | 1475897..1476063 | 178..344 | 820 | 99.4 | Plus |
X | 23527363 | X | 1476347..1476482 | 476..611 | 680 | 100 | Plus |
X | 23527363 | X | 1476150..1476284 | 344..478 | 675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1361976..1362109 | 344..477 | 100 | -> | Plus |
chrX | 1362175..1362306 | 478..609 | 100 | -> | Plus |
chrX | 1360677..1360857 | 1..181 | 98 | -> | Plus |
chrX | 1361727..1361888 | 182..343 | 99 | -> | Plus |
chrX | 1362371..1362616 | 610..855 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14777-RC | 1..591 | 190..780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14777-RC | 1..591 | 190..780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14777-RD | 1..591 | 190..780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14777-RB | 1..591 | 190..780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14777-RE | 1..591 | 190..780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14777-RB | 2..855 | 2..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14777-RB | 2..855 | 2..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14777-RB | 5..859 | 1..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14777-RB | 2..855 | 2..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14777-RB | 5..859 | 1..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1466753..1466933 | 1..181 | 99 | -> | Plus |
X | 1467803..1467964 | 182..343 | 100 | -> | Plus |
X | 1468052..1468185 | 344..477 | 100 | -> | Plus |
X | 1468251..1468382 | 478..609 | 100 | -> | Plus |
X | 1468447..1468692 | 610..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1466753..1466933 | 1..181 | 99 | -> | Plus |
X | 1467803..1467964 | 182..343 | 100 | -> | Plus |
X | 1468052..1468185 | 344..477 | 100 | -> | Plus |
X | 1468251..1468382 | 478..609 | 100 | -> | Plus |
X | 1468447..1468692 | 610..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1466753..1466933 | 1..181 | 99 | -> | Plus |
X | 1467803..1467964 | 182..343 | 100 | -> | Plus |
X | 1468052..1468185 | 344..477 | 100 | -> | Plus |
X | 1468251..1468382 | 478..609 | 100 | -> | Plus |
X | 1468447..1468692 | 610..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1361836..1361997 | 182..343 | 100 | -> | Plus |
arm_X | 1362085..1362218 | 344..477 | 100 | -> | Plus |
arm_X | 1362284..1362415 | 478..609 | 100 | -> | Plus |
arm_X | 1360786..1360966 | 1..181 | 99 | -> | Plus |
arm_X | 1362480..1362725 | 610..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1476545..1476790 | 610..855 | 99 | Plus | |
X | 1475901..1476062 | 182..343 | 100 | -> | Plus |
X | 1476150..1476283 | 344..477 | 100 | -> | Plus |
X | 1476349..1476480 | 478..609 | 100 | -> | Plus |
X | 1474851..1475031 | 1..181 | 99 | -> | Plus |
Translation from 189 to 779
> RH63812.pep MVPAAVKLLQASLGQWRRGSKLHPMAKGALTYAVMWPAGSLIQQAMEGRK LREYDWARALRFSLFGALYVAPTLYGWVRLTSAMWPQTNLRTGIVKAITE QLSYGPFACVSFFMGMSLLELKTFSQAVEETKEKAAPTYKVGVCIWPILQ TINFSLVPEHNRVVFVSICSLMWTIFLAYMKTHHEEQSNSAVLPCT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20998-PA | 194 | GF20998-PA | 1..189 | 1..187 | 845 | 83.6 | Plus |
Dana\GF20999-PA | 186 | GF20999-PA | 17..184 | 23..188 | 519 | 55.4 | Plus |
Dana\GF16076-PA | 176 | GF16076-PA | 2..168 | 30..185 | 379 | 44.3 | Plus |
Dana\GF20925-PA | 167 | GF20925-PA | 15..164 | 33..180 | 169 | 30.5 | Plus |
Dana\GF10257-PA | 156 | GF10257-PA | 26..151 | 55..181 | 159 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12857-PA | 196 | GG12857-PA | 1..196 | 1..196 | 987 | 93.9 | Plus |
Dere\GG12858-PA | 186 | GG12858-PA | 17..181 | 23..185 | 548 | 59.4 | Plus |
Dere\GG11233-PA | 193 | GG11233-PA | 12..171 | 23..181 | 432 | 46.9 | Plus |
Dere\GG13550-PA | 204 | GG13550-PA | 13..177 | 21..181 | 179 | 28 | Plus |
Dere\GG17779-PA | 245 | GG17779-PA | 89..245 | 38..194 | 170 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24499-PA | 203 | GH24499-PA | 2..187 | 6..188 | 745 | 73.4 | Plus |
Dgri\GH24500-PA | 193 | GH24500-PA | 16..188 | 15..185 | 524 | 54.9 | Plus |
Dgri\GH22820-PA | 193 | GH22820-PA | 16..171 | 27..181 | 396 | 48.1 | Plus |
Dgri\GH24679-PA | 168 | GH24679-PA | 8..162 | 27..178 | 169 | 27.7 | Plus |
Dgri\GH24495-PA | 245 | GH24495-PA | 71..214 | 39..181 | 158 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14777-PF | 196 | CG14777-PF | 1..196 | 1..196 | 1030 | 100 | Plus |
CG14777-PC | 196 | CG14777-PC | 1..196 | 1..196 | 1030 | 100 | Plus |
CG14777-PE | 196 | CG14777-PE | 1..196 | 1..196 | 1030 | 100 | Plus |
CG14777-PD | 196 | CG14777-PD | 1..196 | 1..196 | 1030 | 100 | Plus |
CG14777-PB | 196 | CG14777-PB | 1..196 | 1..196 | 1030 | 100 | Plus |
CG14778-PA | 186 | CG14778-PA | 17..181 | 23..185 | 544 | 58.8 | Plus |
plh-PB | 193 | CG2022-PB | 12..171 | 23..181 | 434 | 47.5 | Plus |
CG12355-PE | 204 | CG12355-PE | 15..177 | 23..181 | 188 | 27.9 | Plus |
CG12355-PB | 204 | CG12355-PB | 15..177 | 23..181 | 188 | 27.9 | Plus |
CG11077-PA | 168 | CG11077-PA | 16..163 | 33..178 | 170 | 27 | Plus |
CG1662-PB | 245 | CG1662-PB | 90..245 | 39..194 | 170 | 26.6 | Plus |
CG1662-PA | 245 | CG1662-PA | 90..245 | 39..194 | 170 | 26.6 | Plus |
CG5906-PA | 196 | CG5906-PA | 42..185 | 39..181 | 164 | 27.6 | Plus |
CG32263-PA | 206 | CG32263-PA | 58..198 | 40..181 | 155 | 27.5 | Plus |
CG32262-PA | 273 | CG32262-PA | 92..237 | 39..181 | 147 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16042-PA | 189 | GI16042-PA | 1..171 | 22..192 | 762 | 80.7 | Plus |
Dmoj\GI16043-PA | 186 | GI16043-PA | 17..181 | 23..185 | 532 | 57 | Plus |
Dmoj\GI10222-PA | 193 | GI10222-PA | 12..171 | 23..181 | 443 | 47.5 | Plus |
Dmoj\GI12229-PA | 200 | GI12229-PA | 9..180 | 17..184 | 208 | 27.6 | Plus |
Dmoj\GI15250-PA | 238 | GI15250-PA | 72..215 | 39..181 | 169 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14256-PA | 204 | GL14256-PA | 1..194 | 1..191 | 900 | 85.6 | Plus |
Dper\GL14257-PA | 186 | GL14257-PA | 17..181 | 23..185 | 541 | 58.8 | Plus |
Dper\GL22208-PA | 193 | GL22208-PA | 12..174 | 23..184 | 430 | 45.4 | Plus |
Dper\GL25660-PA | 199 | GL25660-PA | 3..187 | 7..191 | 193 | 25.7 | Plus |
Dper\GL20995-PA | 209 | GL20995-PA | 21..163 | 38..181 | 164 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13236-PA | 204 | GA13236-PA | 1..194 | 1..191 | 899 | 85.1 | Plus |
Dpse\GA13237-PA | 186 | GA13237-PA | 17..181 | 23..185 | 540 | 58.2 | Plus |
Dpse\GA15190-PA | 193 | GA15190-PA | 12..174 | 23..184 | 430 | 45.4 | Plus |
Dpse\GA23640-PA | 199 | GA23640-PA | 3..187 | 7..191 | 193 | 25.7 | Plus |
Dpse\GA16798-PA | 180 | GA16798-PA | 21..163 | 38..181 | 163 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19141-PA | 196 | GM19141-PA | 1..196 | 1..196 | 1025 | 98.5 | Plus |
Dsec\GM19142-PA | 186 | GM19142-PA | 17..181 | 23..185 | 540 | 58.8 | Plus |
Dsec\GM10665-PA | 193 | GM10665-PA | 12..171 | 23..181 | 432 | 46.9 | Plus |
Dsec\GM13015-PA | 168 | GM13015-PA | 8..163 | 25..178 | 171 | 27.3 | Plus |
Dsec\GM14037-PA | 205 | GM14037-PA | 57..204 | 39..185 | 168 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19642-PA | 193 | GD19642-PA | 9..171 | 20..181 | 434 | 46 | Plus |
Dsim\GD12563-PA | 205 | GD12563-PA | 16..200 | 23..193 | 182 | 26.2 | Plus |
Dsim\GD24363-PA | 168 | GD24363-PA | 8..163 | 25..178 | 171 | 27.3 | Plus |
Dsim\GD13316-PA | 207 | GD13316-PA | 57..206 | 39..185 | 169 | 29.1 | Plus |
Dsim\GD17122-PA | 245 | GD17122-PA | 90..245 | 39..194 | 167 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15554-PA | 202 | GJ15554-PA | 1..193 | 1..189 | 803 | 76.2 | Plus |
Dvir\GJ15555-PA | 186 | GJ15555-PA | 17..181 | 23..185 | 525 | 57 | Plus |
Dvir\GJ11024-PA | 193 | GJ11024-PA | 12..171 | 23..181 | 438 | 46.2 | Plus |
Dvir\GJ11459-PA | 197 | GJ11459-PA | 3..194 | 7..196 | 194 | 24.2 | Plus |
Dvir\GJ16017-PA | 168 | GJ16017-PA | 8..162 | 27..178 | 181 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10054-PA | 206 | GK10054-PA | 1..188 | 1..184 | 826 | 79.3 | Plus |
Dwil\GK10055-PA | 181 | GK10055-PA | 12..176 | 23..185 | 536 | 58.2 | Plus |
Dwil\GK14294-PA | 137 | GK14294-PA | 12..131 | 23..141 | 313 | 45 | Plus |
Dwil\GK18850-PA | 168 | GK18850-PA | 3..168 | 22..184 | 178 | 24.7 | Plus |
Dwil\GK20364-PA | 309 | GK20364-PA | 74..242 | 16..181 | 162 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16688-PA | 196 | GE16688-PA | 1..196 | 1..196 | 988 | 93.9 | Plus |
Dyak\GE16689-PA | 186 | GE16689-PA | 17..181 | 23..185 | 532 | 57.6 | Plus |
Dyak\GE11128-PA | 193 | GE11128-PA | 12..171 | 23..181 | 422 | 46.2 | Plus |
Dyak\GE25314-PA | 193 | GE25314-PA | 12..171 | 23..181 | 416 | 45.6 | Plus |
Dyak\GE19851-PA | 204 | GE19851-PA | 15..177 | 23..181 | 179 | 27.9 | Plus |
Translation from 189 to 779
> RH63812.hyp MVPAAVKLLQASLGQWRRGSKLHPMAKGALTYAVMWPAGSLIQQAMEGRK LREYDWARALRFSLFGALYVAPTLYGWVRLTSAMWPQTNLRTGIVKAITE QLSYGPFACVSFFMGMSLLELKTFSQAVEETKEKAAPTYKVGVCIWPILQ TINFSLVPEHNRVVFVSICSLMWTIFLAYMKTHHEEQSNSAVLPCT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14777-PF | 196 | CG14777-PF | 1..196 | 1..196 | 1030 | 100 | Plus |
CG14777-PC | 196 | CG14777-PC | 1..196 | 1..196 | 1030 | 100 | Plus |
CG14777-PE | 196 | CG14777-PE | 1..196 | 1..196 | 1030 | 100 | Plus |
CG14777-PD | 196 | CG14777-PD | 1..196 | 1..196 | 1030 | 100 | Plus |
CG14777-PB | 196 | CG14777-PB | 1..196 | 1..196 | 1030 | 100 | Plus |