Clone RH64870 Report

Search the DGRC for RH64870

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:648
Well:70
Vector:pFlc-1
Associated Gene/TranscriptUcp4A-RA
Protein status:RH64870.pep: gold
Preliminary Size:1023
Sequenced Size:1783

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6492 2002-01-01 Sim4 clustering to Release 2
CG6492 2003-01-01 Sim4 clustering to Release 3
Ucp4A 2008-04-29 Release 5.5 accounting
Ucp4A 2008-08-15 Release 5.9 accounting
Ucp4A 2008-12-18 5.12 accounting

Clone Sequence Records

RH64870.complete Sequence

1783 bp (1783 high quality bases) assembled on 2005-08-09

GenBank Submission: BT023820

> RH64870.complete
GGTTGCGTTTTTTTATTGCGCTGATAACTACGGGTTTTTTAGTTTTTTAT
AAAGGATATAAATAGAGCGGCTTTCGCAGGCAGGGTGGACAAACATGATT
AACCGCCCAGCACAGCGCGTGCCAACGAGTGTTTTATAAGAGCCCGATTT
GGATTCTGATTTTGATTTGCTATTGCCTTTGCCTCTGCCATTGCGATTGT
TATTGTTTTTGTGCCCCGCCTTCGCCCCACAAAACCGAAAAGGAAAAAAC
CAAGAGAAGCGTTGCCAAAACGTTGTTATGTAAATGCACGGAAGCAGAAC
GTTGGCACAGGCACCAATCCTCATCCGGAATCCACCGCAATCGACGTGCT
CCGCAGCGGGACACGAAGTTTAAGGTCGGAGCGCAGAGCACCCGCACGCA
TCACGCGATTGTGTGAAAGTTTCGCCTGGCTCGAATAGGAAACCCGGCTC
GGAAATGGCCGCCAAGACGGACGAATCGTCGCCAGCCGTGGCGTCAAGCA
CAAGCAGCAATCCCGCTCCCTCCAGCGGACGCCACCAGTTGCGACCCGTG
AAGTTTGACTACGCGGACTCATTCGCCTGCACTTACATCGTTTCCGTGGT
GGCCGCCTCCATTGCAGAGCTCGCGACCTATCCCTTGGACCTGACCAAGA
CGCGTCTGCAGATCCAGGGCGAAGGAGCCGCCCATTCGGCGGGAAAGTCC
AATATGCAATACCGCGGCATGGTGGCCACCGCCTTCGGGATTGCGCGTGA
GGAGGGCGCCCTGAAGCTGTGGCAGGGCGTAACGCCGGCGCTCTACCGAC
ACGTCGTCTATAGCGGTGTGAGGATCTGCAGCTACGACCTGATGCGCAAG
GAGTTCACACAGAACGGCACCCAGGCTCTGCCGGTTTGGAAGTCGGCGCT
GTGCGGCGTCACGGCCGGAGCCGTTGCCCAGTGGCTTGCCTCGCCCGCTG
ACCTCGTCAAGGTGCAAATCCAAATGGAGGGCCGACGACGTCTGATGGGC
GAGCCACCGAGGGTGCACTCCGCTGGCCATGCCTTCCGCCAGATCGTGCA
GCGTGGCGGAATTAAGGGCCTGTGGAAGGGCAGCATCCCGAATGTGCAGC
GAGCGGCGTTGGTCAATCTGGGCGACCTAACCACATACGACACCATCAAG
CACCTGATCATGAATCGCCTGCAGATGCCCGACTGTCACACAGTGCACGT
GCTGGCCTCCGTTTGTGCCGGATTCGTGGCAGCGATCATGGGCACGCCAG
CTGATGTGGTGAAGACGCGCATCATGAACCAGCCCACCGACGAGAATGGC
CGGGGCCTGCTCTATCGCGGATCCGTGGACTGCCTGCGACAGACGGTTTC
GAAGGAGGGCTTTGTGGCGCTGTACAAAGGCTTTCTGCCCTGCTGGATAC
GAATGGCGCCGTGGTCGCTCACCTTCTGGCTGTCCTTCGAACAGATCCGC
AAGATGATCGGAGCCTCCGGCTACTGAGCGGTGGCTCAATTTAAGTTTAG
GTGTAGATGTACATACAAGCACATGTATAACGCAGTTCGTTCATGTTACC
CCGCCTTTAAGTCGGTCATAATCCTATTTTCCGTGCCTGAATGCCCAAAT
GTCAGGAGGATGTTGTGCGGCTCCTGGCCAAGCTTAGCAGCATATACTCT
GTCCATTTTAGTCTGTTATGCCAATCAGATCTTTCAGGTTTCTTTCTCTT
ACCTTTTGTTATTGTTGTTGCCTTAAGATTAAAATCAAAACTTACAATAA
AGCGAGAAACTTGTTAAAAAAAAAAAAAAAAAA

RH64870.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:31:42
Subject Length Description Subject Range Query Range Score Percent Strand
Ucp4A-RA 1946 Ucp4A-RA 53..1817 2..1766 8825 100 Plus
Ucp4A.a 1768 Ucp4A.a 1..1768 2..1765 8755 99.7 Plus
Ucp4A.b 1742 Ucp4A.b 412..1742 435..1765 6655 100 Plus
Ucp4A.b 1742 Ucp4A.b 1..411 2..412 2055 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:46:46
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 17736274..17736765 812..1303 2445 99.8 Plus
chrX 22417052 chrX 17736826..17737289 1302..1765 2305 99.8 Plus
chrX 22417052 chrX 17734333..17734765 2..434 2150 99.8 Plus
chrX 22417052 chrX 17734835..17735103 435..703 1345 100 Plus
chrX 22417052 chrX 17736028..17736137 704..813 550 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:36:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:46:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17846929..17847420 812..1303 2460 100 Plus
X 23542271 X 17847481..17847945 1302..1766 2325 100 Plus
X 23542271 X 17844988..17845420 2..434 2165 100 Plus
X 23542271 X 17845490..17845758 435..703 1345 100 Plus
X 23542271 X 17846683..17846792 704..813 550 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:22:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 17855027..17855518 812..1303 2460 100 Plus
X 23527363 X 17855579..17856043 1302..1766 2325 100 Plus
X 23527363 X 17853086..17853518 2..434 2165 100 Plus
X 23527363 X 17853588..17853856 435..703 1345 100 Plus
X 23527363 X 17854781..17854890 704..813 550 100 Plus
Blast to na_te.dros performed 2019-03-16 07:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2636..2681 212..167 122 73.9 Minus
Tabor 7345 Tabor TABOR 7345bp 2662..2723 210..154 117 72.6 Minus

RH64870.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:47:36 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 17736028..17736137 704..813 100 -> Plus
chrX 17734332..17734765 1..434 99 -> Plus
chrX 17734835..17735103 435..703 100 -> Plus
chrX 17736276..17736764 814..1302 99 -> Plus
chrX 17736827..17737289 1303..1765 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:52:19 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4A-RA 1..1023 455..1477 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:54:59 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4A-RB 1..1023 455..1477 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:47:36 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4A-RA 1..1023 455..1477 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:35:39 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4A-RA 1..1023 455..1477 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:39:05 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4A-RA 1..1023 455..1477 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:30:54 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4A-RA 1..1476 2..1477 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:54:59 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4A-RA 1..1764 2..1765 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:47:36 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4A-RA 39..1803 1..1765 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:35:40 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4A-RA 1..1476 2..1477 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:39:05 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4A-RA 39..1803 1..1765 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:47:36 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
X 17844987..17845420 1..434 99 -> Plus
X 17845490..17845758 435..703 100 -> Plus
X 17846683..17846792 704..813 100 -> Plus
X 17846931..17847419 814..1302 100 -> Plus
X 17847482..17847944 1303..1765 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:47:36 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
X 17844987..17845420 1..434 99 -> Plus
X 17845490..17845758 435..703 100 -> Plus
X 17846683..17846792 704..813 100 -> Plus
X 17846931..17847419 814..1302 100 -> Plus
X 17847482..17847944 1303..1765 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:47:36 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
X 17844987..17845420 1..434 99 -> Plus
X 17845490..17845758 435..703 100 -> Plus
X 17846683..17846792 704..813 100 -> Plus
X 17846931..17847419 814..1302 100 -> Plus
X 17847482..17847944 1303..1765 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:47:36 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17739020..17739453 1..434 99 -> Plus
arm_X 17739523..17739791 435..703 100 -> Plus
arm_X 17740716..17740825 704..813 100 -> Plus
arm_X 17740964..17741452 814..1302 100 -> Plus
arm_X 17741515..17741977 1303..1765 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:14:14 Download gff for RH64870.complete
Subject Subject Range Query Range Percent Splice Strand
X 17853085..17853518 1..434 99 -> Plus
X 17853588..17853856 435..703 100 -> Plus
X 17854781..17854890 704..813 100 -> Plus
X 17855029..17855517 814..1302 100 -> Plus
X 17855580..17856042 1303..1765 100   Plus

RH64870.pep Sequence

Translation from 454 to 1476

> RH64870.pep
MAAKTDESSPAVASSTSSNPAPSSGRHQLRPVKFDYADSFACTYIVSVVA
ASIAELATYPLDLTKTRLQIQGEGAAHSAGKSNMQYRGMVATAFGIAREE
GALKLWQGVTPALYRHVVYSGVRICSYDLMRKEFTQNGTQALPVWKSALC
GVTAGAVAQWLASPADLVKVQIQMEGRRRLMGEPPRVHSAGHAFRQIVQR
GGIKGLWKGSIPNVQRAALVNLGDLTTYDTIKHLIMNRLQMPDCHTVHVL
ASVCAGFVAAIMGTPADVVKTRIMNQPTDENGRGLLYRGSVDCLRQTVSK
EGFVALYKGFLPCWIRMAPWSLTFWLSFEQIRKMIGASGY*

RH64870.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:19:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21108-PA 359 GF21108-PA 38..359 26..340 1592 90.7 Plus
Dana\GF15592-PA 357 GF15592-PA 27..357 14..340 802 45.6 Plus
Dana\GF15828-PA 335 GF15828-PA 18..329 23..336 590 36.9 Plus
Dana\GF15593-PA 335 GF15593-PA 40..335 44..340 569 36.2 Plus
Dana\GF25285-PA 303 GF25285-PA 10..302 44..333 473 35.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:19:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19134-PA 340 GG19134-PA 1..340 1..340 1802 98.5 Plus
Dere\GG25109-PA 337 GG25109-PA 40..337 44..340 804 48.7 Plus
Dere\GG25108-PA 335 GG25108-PA 40..335 44..340 643 40.7 Plus
Dere\GG15525-PA 303 GG15525-PA 10..302 44..333 472 36.2 Plus
Dere\GG20426-PA 303 GG20426-PA 6..293 44..331 403 33.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:19:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24385-PA 362 GH24385-PA 44..362 25..340 1535 90.9 Plus
Dgri\GH11016-PA 333 GH11016-PA 11..333 17..340 870 49.7 Plus
Dgri\GH23855-PA 333 GH23855-PA 3..333 12..340 866 47.7 Plus
Dgri\GH11017-PA 333 GH11017-PA 38..333 44..340 680 42.3 Plus
Dgri\GH15075-PA 305 GH15075-PA 10..304 44..333 466 35.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:09
Subject Length Description Subject Range Query Range Score Percent Strand
Ucp4A-PB 340 CG6492-PB 1..340 1..340 1772 100 Plus
Ucp4A-PA 340 CG6492-PA 1..340 1..340 1772 100 Plus
Ucp4B-PA 337 CG18340-PA 40..337 44..340 772 48 Plus
Ucp4C-PA 335 CG9064-PA 40..335 44..340 621 40 Plus
Bmcp-PB 303 CG7314-PB 10..302 44..333 496 36.5 Plus
Bmcp-PA 303 CG7314-PA 10..302 44..333 496 36.5 Plus
Ucp4B-PB 222 CG18340-PB 40..221 44..224 441 46.2 Plus
Ucp4B-PC 228 CG18340-PC 40..223 44..226 438 45.7 Plus
Ucp4A-PC 128 CG6492-PC 1..83 1..83 413 100 Plus
CG18327-PB 304 CG18327-PB 6..293 44..331 393 31.7 Plus
CG18327-PA 304 CG18327-PA 6..293 44..331 393 31.7 Plus
CG8323-PA 303 CG8323-PA 6..293 44..331 392 32.1 Plus
CG18324-PB 307 CG18324-PB 6..293 44..331 362 31 Plus
CG1907-PA 317 CG1907-PA 31..302 54..333 359 31.3 Plus
CG18418-PA 311 CG18418-PA 18..295 44..333 318 27.1 Plus
CG7514-PA 301 CG7514-PA 16..286 44..333 303 29.3 Plus
Dic3-PA 287 CG11196-PA 17..281 49..336 278 27 Plus
Dic2-PC 304 CG4323-PC 24..285 49..336 266 28.7 Plus
Dic2-PA 304 CG4323-PA 24..285 49..336 266 28.7 Plus
Dic1-PC 280 CG8790-PC 20..277 54..336 253 27.3 Plus
Dic1-PA 280 CG8790-PA 20..277 54..336 253 27.3 Plus
Dic1-PB 280 CG8790-PB 20..277 54..336 253 27.3 Plus
CG18324-PA 199 CG18324-PA 4..185 151..331 252 31.7 Plus
CG5254-PA 306 CG5254-PA 34..295 60..329 241 26.8 Plus
CG9582-PB 300 CG9582-PB 17..291 44..331 226 25.5 Plus
CG9582-PA 300 CG9582-PA 17..291 44..331 226 25.5 Plus
Dic4-PC 302 CG18363-PC 29..292 50..336 223 25.7 Plus
Dic4-PA 302 CG18363-PA 29..292 50..336 223 25.7 Plus
Tpc1-PA 332 CG6608-PA 1..330 1..334 214 23.7 Plus
Tpc1-PB 332 CG6608-PB 1..330 1..334 214 23.7 Plus
CG8026-PD 322 CG8026-PD 12..302 31..331 212 25.7 Plus
aralar1-PB 679 CG2139-PB 336..603 50..334 212 26.1 Plus
aralar1-PD 682 CG2139-PD 339..606 50..334 212 26.1 Plus
aralar1-PA 682 CG2139-PA 339..606 50..334 212 26.1 Plus
aralar1-PF 694 CG2139-PF 339..606 50..334 212 26.1 Plus
aralar1-PC 695 CG2139-PC 352..619 50..334 212 26.1 Plus
aralar1-PE 707 CG2139-PE 364..631 50..334 212 26.1 Plus
CG8026-PB 304 CG8026-PB 12..302 31..331 202 25.4 Plus
sea-PE 317 CG6782-PE 42..289 49..312 196 25.1 Plus
sea-PD 317 CG6782-PD 42..289 49..312 196 25.1 Plus
sea-PC 317 CG6782-PC 42..289 49..312 196 25.1 Plus
sea-PA 317 CG6782-PA 42..289 49..312 196 25.1 Plus
GC1-PB 321 CG18347-PB 30..298 49..319 194 27.1 Plus
GC1-PA 321 CG18347-PA 30..298 49..319 194 27.1 Plus
CG4995-PD 360 CG4995-PD 6..185 149..339 186 27.2 Plus
CG4995-PC 360 CG4995-PC 6..185 149..339 186 27.2 Plus
CG4995-PB 399 CG4995-PB 45..224 149..339 186 27.2 Plus
CG4995-PA 399 CG4995-PA 45..224 149..339 186 27.2 Plus
CG5254-PB 237 CG5254-PB 3..226 98..329 184 25.6 Plus
sesB-PE 299 CG16944-PE 7..299 37..335 180 22.5 Plus
sesB-PB 299 CG16944-PB 7..299 37..335 180 22.5 Plus
aralar1-PB 679 CG2139-PB 333..508 151..335 153 26.3 Plus
aralar1-PD 682 CG2139-PD 336..511 151..335 153 26.3 Plus
aralar1-PA 682 CG2139-PA 336..511 151..335 153 26.3 Plus
aralar1-PF 694 CG2139-PF 336..511 151..335 153 26.3 Plus
aralar1-PC 695 CG2139-PC 349..524 151..335 153 26.3 Plus
aralar1-PE 707 CG2139-PE 361..536 151..335 153 26.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:19:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15324-PA 379 GI15324-PA 48..379 23..340 1541 88.6 Plus
Dmoj\GI17535-PA 338 GI17535-PA 15..338 17..340 756 43.7 Plus
Dmoj\GI17536-PA 334 GI17536-PA 39..334 44..340 632 39 Plus
Dmoj\GI13724-PA 305 GI13724-PA 10..304 44..333 470 35 Plus
Dmoj\GI19085-PA 307 GI19085-PA 6..293 44..331 385 30.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14753-PA 369 GL14753-PA 29..369 14..340 1593 87.4 Plus
Dper\GL19096-PA 336 GL19096-PA 38..336 44..340 704 43.9 Plus
Dper\GL19094-PA 335 GL19094-PA 40..335 44..340 665 40 Plus
Dper\GL19095-PA 255 GL19095-PA 64..255 149..340 508 46.9 Plus
Dper\GL20712-PA 303 GL20712-PA 10..302 44..333 424 34.6 Plus
Dper\GL19095-PA 255 GL19095-PA 38..249 44..234 189 28.2 Plus
Dper\GL19094-PA 335 GL19094-PA 138..307 39..212 153 27.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19634-PA 367 GA19634-PA 21..367 2..340 1597 85.6 Plus
Dpse\GA25345-PA 336 GA25345-PA 38..336 44..340 703 43.5 Plus
Dpse\GA25344-PA 337 GA25344-PA 39..337 44..340 692 43 Plus
Dpse\GA21513-PA 335 GA21513-PA 40..335 44..340 666 40 Plus
Dpse\GA20254-PA 303 GA20254-PA 10..302 44..333 480 36.3 Plus
Dpse\GA21513-PA 335 GA21513-PA 138..307 39..212 154 27.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22858-PA 267 GM22858-PA 1..264 1..263 1304 94.3 Plus
Dsec\GM18586-PA 337 GM18586-PA 40..337 44..340 794 48 Plus
Dsec\GM18585-PA 335 GM18585-PA 40..335 44..340 650 41 Plus
Dsec\GM25293-PA 303 GM25293-PA 10..302 44..333 471 36.2 Plus
Dsec\GM21512-PA 303 GM21512-PA 6..293 44..331 410 34.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14942-PA 160 GD14942-PA 1..160 181..340 858 97.5 Plus
Dsim\GD23374-PA 336 GD23374-PA 39..336 44..340 807 48.3 Plus
Dsim\GD23373-PA 335 GD23373-PA 40..335 44..340 651 41 Plus
Dsim\GD14324-PA 303 GD14324-PA 10..302 44..333 471 36.2 Plus
Dsim\GD24849-PA 88 GD24849-PA 1..83 1..83 420 98.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:19:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14761-PA 379 GJ14761-PA 55..379 26..340 1579 90.8 Plus
Dvir\GJ15429-PA 332 GJ15429-PA 15..332 23..340 829 47.8 Plus
Dvir\GJ15435-PA 330 GJ15435-PA 22..330 22..340 711 42.4 Plus
Dvir\GJ17214-PA 328 GJ17214-PA 33..324 45..336 669 45.1 Plus
Dvir\GJ15433-PA 334 GJ15433-PA 39..334 44..340 663 41.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:19:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16380-PA 359 GK16380-PA 22..359 8..340 1618 89.1 Plus
Dwil\GK14710-PA 365 GK14710-PA 65..365 40..340 623 37.7 Plus
Dwil\GK10490-PA 304 GK10490-PA 10..303 44..333 463 35.7 Plus
Dwil\GK22254-PA 304 GK22254-PA 6..293 44..331 390 32.8 Plus
Dwil\GK22044-PA 306 GK22044-PA 9..296 44..331 373 30.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:19:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17690-PA 340 GE17690-PA 1..340 1..340 1797 97.9 Plus
Dyak\GE25777-PA 338 GE25777-PA 40..338 44..340 793 47.7 Plus
Dyak\GE25767-PA 335 GE25767-PA 40..335 44..340 638 41 Plus
Dyak\GE21842-PA 303 GE21842-PA 10..302 44..333 468 36.2 Plus
Dyak\GE13557-PA 303 GE13557-PA 6..293 44..331 406 33.7 Plus

RH64870.hyp Sequence

Translation from 454 to 1476

> RH64870.hyp
MAAKTDESSPAVASSTSSNPAPSSGRHQLRPVKFDYADSFACTYIVSVVA
ASIAELATYPLDLTKTRLQIQGEGAAHSAGKSNMQYRGMVATAFGIAREE
GALKLWQGVTPALYRHVVYSGVRICSYDLMRKEFTQNGTQALPVWKSALC
GVTAGAVAQWLASPADLVKVQIQMEGRRRLMGEPPRVHSAGHAFRQIVQR
GGIKGLWKGSIPNVQRAALVNLGDLTTYDTIKHLIMNRLQMPDCHTVHVL
ASVCAGFVAAIMGTPADVVKTRIMNQPTDENGRGLLYRGSVDCLRQTVSK
EGFVALYKGFLPCWIRMAPWSLTFWLSFEQIRKMIGASGY*

RH64870.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:53:45
Subject Length Description Subject Range Query Range Score Percent Strand
Ucp4A-PB 340 CG6492-PB 1..340 1..340 1772 100 Plus
Ucp4A-PA 340 CG6492-PA 1..340 1..340 1772 100 Plus
Ucp4B-PA 337 CG18340-PA 40..337 44..340 772 48 Plus
Ucp4C-PA 335 CG9064-PA 40..335 44..340 621 40 Plus
Bmcp-PB 303 CG7314-PB 10..302 44..333 496 36.5 Plus