BDGP Sequence Production Resources |
Search the DGRC for RH65876
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 658 |
Well: | 76 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15118-RD |
Protein status: | RH65876.pep: gold |
Preliminary Size: | 2166 |
Sequenced Size: | 2361 |
Gene | Date | Evidence |
---|---|---|
CG15118 | 2002-10-18 | Blastp of sequenced clone |
CG15118 | 2008-04-29 | Release 5.5 accounting |
CG15118 | 2008-08-15 | Release 5.9 accounting |
CG15118 | 2008-12-18 | 5.12 accounting |
2361 bp (2361 high quality bases) assembled on 2002-10-18
GenBank Submission: BT001859
> RH65876.complete GACTGCGATAAAACTTACTGATTCCGTCACCTTGCAGAACGATAAGGAGA AAATCGATCCCCGCGGCCGGACGCCACTGATGCTGGCTGTGAGATTGGCC AATTTGCCATGCGTTAAATGCCTTCTGGCGGCCAAATGCAATGCGACCTA TGAGTACGAAGGCTGGTCGATTGTCCAGGAAGCGGTCTGCACCGGCGATG TGGACATACTGACGGCCATCATCGAAGTCCGGGATCTCCAGCGTCATGTC CAGCGGGTTACGCATGTGCCTAAGCTGCTGCAGCACCTATTGGACGCACC AGATTTCTACATCGAGATGAAGTGGGAATTCACCTCCTGGGTGCCTCTGA TGTCGCGTCTCTGTCCCAGCGACACCTACAAGGTCTACAAGCGGGGAGCC AACGTCCGGATAGATACCACCCTGCTGGGCTTCGACAACAACACCTGGCA ACGGGGCAATCGCTCTTACATCTTCAAGGGGGCCAAAGAAACTGCCACGA TGATCGAGATCGATCACGATACAAACGAAGTAATGGTGGAGGAGATGAGC AGCGATATCGGTGATATTGTGGCCATTCCACCAGCCTTGGGCACCGTGAG GGCGCGCCTCAATGCCCCGGTGATCACGAACAACATCGAGATGGACAAGA TTAGCTTCGAGCGCAACAAGTGCGGCATATGGGGATGGCGTAGCGAGAAA TCTGAGATGATCAACGGCTACAACTGCAAGGTGTATGGGGCCAGCAACGT GGAGTTTGTTACAAAGACGCGAATGGATCACCTTAGCGAGGAGCAAATTA AGAACAAGACAGCGAGGACTCCACTGCATAGCCTGCTGGGAATTGCTGAT GAGGATTATGTGTCACCCGCTGATGCTGCTGCGGCACTAAAAGATCGTAC ACCATCGCCCCGGTTGGAGGAAGCTTCCAACGCTGGAGTTGAAAATGGTG GCCGAAACTCACCAGCCCCTGGAAATCAAAGCAACGGAAGCTCCGCGGGT GCGTCGGGCACCAGTACTCCAAAGTCTTCTGTTACTCCGGAGGAGTATTT TACTCAGGAGTTTGATCTTCACGGAAGGGATGTTGGCGGTCCCAAGAACC TGAGCACAAAGGTGCAGCGCTTTAGAGCCAACTTATGGTTAGCCGAGGAG CATCCCATTCGACTGCAGGAACAGGTGCTTCCCATTCTGGATCTCATGTC CACCATGGCCAGTCCACATGTGTCCAAGCTGAGAGACTTTATCACCATGC AGCTGCCTGCTGGTTTTCCAGTCAAAGTGGAAATCCCGCTCTTCCATGTT TTAAATGCCTGTATTACATTTGGAAACGTATTTGCTTTAACCACGCCCGT TGATCACGTGGCCACGCTGCAGGAGCAAGATCGTGTCACTTGTTTGGTCG ATGATCGCTGCTTCGATATCCCAGCTCACTACACAAACAGGGGCAGCGAT GTCCGTCGGCAAATTCCTCTTGACGAGGATGACATGCTACAGTATGCAAT TGAGCAGAGTTTGGTGGAAACAAGCGGAGCCTGTGGCGTGGACGCTCGGG ACGACGACAAGGTGGATATCTGGGAAGTGTTGAGAGGCCAAAACGTCGTG GGCTCCGATCTCCTGCCAGAAGATGACGAGCAGCTGCAACGAGTCCTGCA GGAATCGCTGCTTGGCGCCCATGCAAATCTCCAAAGCGGTTCGCCCGCCT CCGACGAAGACGACGATGGTGGCTTCCGGTATGTGGATCCCGATTTGGCC ATGGCCATGCGACTGTCACAGCAAGAGCAGAGAAAGTTCGAACTGGAGCG GCAGCAGGAGCAGGAGATGATCGAGCAGGCGTTAAAGCTTAGCCTGCAAG AGCACTAATATACTATCAGCAATTCCAAATTGAAGTTATATTGATTTCAA GTGTAACCTTCGGGCTAAGTTGTATAAATACTACGAGTACTTTAAGTTAC CCTCGCATCCTTCTGCGCCCTGTCCTTGTTTTGTATTGTGATACAAGCGG GACGCAAGCGGGAAGCAGTCGCCTGGTCTCAACTCGTCCACTCGCAACCG AAGGATCCACCCTATATATACCATGTATCCAAAGTAGTCCTTGTAGTTGT AGCTTTTGCATTGAATCCGGTATCTATTATCTAGATACTATCTTAAATTT AAGTGCGTGTGGCGACCGTGAGATATGTCTTATATGCGATCGAACCGGGT TAGCCACATGCTTGCGTGTCCTTAATCTGTAACCACTAATCACCATTATG CGTAATTTATACCAATAATACCCACTCACACATCATGCGCATGTAAGCCG ACACCTTTTTGTGTAAATGAAGAAAATATATGAAATAATCATCAGAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15118-RD | 2491 | CG15118-RD | 44..2392 | 2..2350 | 11730 | 99.9 | Plus |
CG15118-RC | 2652 | CG15118-RC | 331..2646 | 35..2350 | 11565 | 99.9 | Plus |
CG15118-RA | 2508 | CG15118-RA | 187..2502 | 35..2350 | 11565 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 15022013..15022755 | 1641..899 | 3715 | 100 | Minus |
chr2R | 21145070 | chr2R | 15020858..15021562 | 2345..1641 | 3495 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 15023068..15023384 | 802..486 | 1585 | 100 | Minus |
chr2R | 21145070 | chr2R | 15023452..15023766 | 485..171 | 1575 | 100 | Minus |
chr2R | 21145070 | chr2R | 15023824..15023992 | 170..2 | 830 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 15022815..15022916 | 898..797 | 495 | 99 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 19134883..19135625 | 1641..899 | 3715 | 100 | Minus |
2R | 25286936 | 2R | 19133723..19134432 | 2350..1641 | 3535 | 99.9 | Minus |
2R | 25286936 | 2R | 19135939..19136255 | 802..486 | 1585 | 100 | Minus |
2R | 25286936 | 2R | 19136323..19136637 | 485..171 | 1575 | 100 | Minus |
2R | 25286936 | 2R | 19136695..19136863 | 170..2 | 845 | 100 | Minus |
2R | 25286936 | 2R | 19135685..19135786 | 898..797 | 495 | 99 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 19136082..19136824 | 1641..899 | 3715 | 100 | Minus |
2R | 25260384 | 2R | 19134922..19135631 | 2350..1641 | 3535 | 99.8 | Minus |
2R | 25260384 | 2R | 19137138..19137454 | 802..486 | 1585 | 100 | Minus |
2R | 25260384 | 2R | 19137522..19137836 | 485..171 | 1575 | 100 | Minus |
2R | 25260384 | 2R | 19137894..19138062 | 170..2 | 845 | 100 | Minus |
2R | 25260384 | 2R | 19136884..19136985 | 898..797 | 495 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 15023824..15023992 | 1..170 | 98 | Minus | |
chr2R | 15020858..15021561 | 1642..2345 | 99 | <- | Minus |
chr2R | 15022013..15022755 | 899..1641 | 100 | <- | Minus |
chr2R | 15022815..15022910 | 803..898 | 100 | <- | Minus |
chr2R | 15023068..15023384 | 486..802 | 100 | <- | Minus |
chr2R | 15023452..15023766 | 171..485 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15118-RB | 84..1914 | 28..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15118-RB | 84..1914 | 28..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15118-RA | 84..1914 | 28..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15118-RB | 84..1914 | 28..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15118-RA | 84..1914 | 28..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15118-RD | 1..2344 | 2..2345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15118-RD | 1..2344 | 2..2345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15118-RD | 1..2344 | 2..2345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15118-RD | 1..2344 | 2..2345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15118-RD | 1..2344 | 2..2345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19133728..19134431 | 1642..2345 | 100 | <- | Minus |
2R | 19134883..19135625 | 899..1641 | 100 | <- | Minus |
2R | 19135685..19135780 | 803..898 | 100 | <- | Minus |
2R | 19135939..19136255 | 486..802 | 100 | <- | Minus |
2R | 19136323..19136637 | 171..485 | 100 | <- | Minus |
2R | 19136695..19136863 | 1..170 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19133728..19134431 | 1642..2345 | 100 | <- | Minus |
2R | 19134883..19135625 | 899..1641 | 100 | <- | Minus |
2R | 19135685..19135780 | 803..898 | 100 | <- | Minus |
2R | 19135939..19136255 | 486..802 | 100 | <- | Minus |
2R | 19136323..19136637 | 171..485 | 100 | <- | Minus |
2R | 19136695..19136863 | 1..170 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19133728..19134431 | 1642..2345 | 100 | <- | Minus |
2R | 19134883..19135625 | 899..1641 | 100 | <- | Minus |
2R | 19135685..19135780 | 803..898 | 100 | <- | Minus |
2R | 19135939..19136255 | 486..802 | 100 | <- | Minus |
2R | 19136323..19136637 | 171..485 | 100 | <- | Minus |
2R | 19136695..19136863 | 1..170 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 15021233..15021936 | 1642..2345 | 100 | <- | Minus |
arm_2R | 15022388..15023130 | 899..1641 | 100 | <- | Minus |
arm_2R | 15023190..15023285 | 803..898 | 100 | <- | Minus |
arm_2R | 15023444..15023760 | 486..802 | 100 | <- | Minus |
arm_2R | 15023828..15024142 | 171..485 | 100 | <- | Minus |
arm_2R | 15024200..15024368 | 1..170 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19134927..19135630 | 1642..2345 | 100 | <- | Minus |
2R | 19136082..19136824 | 899..1641 | 100 | <- | Minus |
2R | 19136884..19136979 | 803..898 | 100 | <- | Minus |
2R | 19137138..19137454 | 486..802 | 100 | <- | Minus |
2R | 19137522..19137836 | 171..485 | 100 | <- | Minus |
2R | 19137894..19138062 | 1..170 | 99 | Minus |
Translation from 0 to 1857
> RH65876.hyp TAIKLTDSVTLQNDKEKIDPRGRTPLMLAVRLANLPCVKCLLAAKCNATY EYEGWSIVQEAVCTGDVDILTAIIEVRDLQRHVQRVTHVPKLLQHLLDAP DFYIEMKWEFTSWVPLMSRLCPSDTYKVYKRGANVRIDTTLLGFDNNTWQ RGNRSYIFKGAKETATMIEIDHDTNEVMVEEMSSDIGDIVAIPPALGTVR ARLNAPVITNNIEMDKISFERNKCGIWGWRSEKSEMINGYNCKVYGASNV EFVTKTRMDHLSEEQIKNKTARTPLHSLLGIADEDYVSPADAAAALKDRT PSPRLEEASNAGVENGGRNSPAPGNQSNGSSAGASGTSTPKSSVTPEEYF TQEFDLHGRDVGGPKNLSTKVQRFRANLWLAEEHPIRLQEQVLPILDLMS TMASPHVSKLRDFITMQLPAGFPVKVEIPLFHVLNACITFGNVFALTTPV DHVATLQEQDRVTCLVDDRCFDIPAHYTNRGSDVRRQIPLDEDDMLQYAI EQSLVETSGACGVDARDDDKVDIWEVLRGQNVVGSDLLPEDDEQLQRVLQ ESLLGAHANLQSGSPASDEDDDGGFRYVDPDLAMAMRLSQQEQRKFELER QQEQEMIEQALKLSLQEH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15118-PB | 637 | CG15118-PB | 31..637 | 12..618 | 3171 | 100 | Plus |
CG15118-PA | 637 | CG15118-PA | 31..637 | 12..618 | 3171 | 100 | Plus |
CG15118-PD | 592 | CG15118-PD | 1..592 | 27..618 | 3090 | 100 | Plus |
CG15118-PE | 630 | CG15118-PE | 31..578 | 12..557 | 2818 | 98.5 | Plus |
CG5742-PB | 543 | CG5742-PB | 107..539 | 10..486 | 479 | 27.8 | Plus |
Translation from 79 to 1857
> RH65876.pep MLAVRLANLPCVKCLLAAKCNATYEYEGWSIVQEAVCTGDVDILTAIIEV RDLQRHVQRVTHVPKLLQHLLDAPDFYIEMKWEFTSWVPLMSRLCPSDTY KVYKRGANVRIDTTLLGFDNNTWQRGNRSYIFKGAKETATMIEIDHDTNE VMVEEMSSDIGDIVAIPPALGTVRARLNAPVITNNIEMDKISFERNKCGI WGWRSEKSEMINGYNCKVYGASNVEFVTKTRMDHLSEEQIKNKTARTPLH SLLGIADEDYVSPADAAAALKDRTPSPRLEEASNAGVENGGRNSPAPGNQ SNGSSAGASGTSTPKSSVTPEEYFTQEFDLHGRDVGGPKNLSTKVQRFRA NLWLAEEHPIRLQEQVLPILDLMSTMASPHVSKLRDFITMQLPAGFPVKV EIPLFHVLNACITFGNVFALTTPVDHVATLQEQDRVTCLVDDRCFDIPAH YTNRGSDVRRQIPLDEDDMLQYAIEQSLVETSGACGVDARDDDKVDIWEV LRGQNVVGSDLLPEDDEQLQRVLQESLLGAHANLQSGSPASDEDDDGGFR YVDPDLAMAMRLSQQEQRKFELERQQEQEMIEQALKLSLQEH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13381-PA | 642 | GF13381-PA | 48..642 | 1..592 | 2849 | 89.6 | Plus |
Dana\GF12280-PA | 542 | GF12280-PA | 124..538 | 2..460 | 468 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20921-PA | 637 | GG20921-PA | 46..637 | 1..592 | 3125 | 98.1 | Plus |
Dere\GG20989-PA | 541 | GG20989-PA | 123..537 | 2..460 | 460 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23148-PA | 649 | GH23148-PA | 48..649 | 1..592 | 2594 | 82.3 | Plus |
Dgri\GH20848-PA | 531 | GH20848-PA | 126..527 | 2..460 | 454 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15118-PD | 592 | CG15118-PD | 1..592 | 1..592 | 3090 | 100 | Plus |
CG15118-PB | 637 | CG15118-PB | 46..637 | 1..592 | 3090 | 100 | Plus |
CG15118-PA | 637 | CG15118-PA | 46..637 | 1..592 | 3090 | 100 | Plus |
CG15118-PE | 630 | CG15118-PE | 46..578 | 1..531 | 2737 | 98.5 | Plus |
CG5742-PB | 543 | CG5742-PB | 125..539 | 2..460 | 447 | 27.4 | Plus |
CG5742-PA | 543 | CG5742-PA | 125..539 | 2..460 | 447 | 27.4 | Plus |
CG5742-PC | 585 | CG5742-PC | 125..539 | 2..460 | 447 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20625-PA | 640 | GI20625-PA | 48..640 | 1..592 | 2665 | 84.2 | Plus |
Dmoj\GI20952-PA | 520 | GI20952-PA | 117..354 | 2..245 | 334 | 31.6 | Plus |
Dmoj\GI20952-PA | 520 | GI20952-PA | 427..516 | 348..460 | 156 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11759-PA | 581 | GL11759-PA | 48..581 | 1..592 | 2374 | 78.6 | Plus |
Dper\GL10514-PA | 539 | GL10514-PA | 122..535 | 2..460 | 472 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13506-PA | 636 | GA13506-PA | 48..636 | 1..592 | 2848 | 89.7 | Plus |
Dpse\GA19099-PA | 539 | GA19099-PA | 122..535 | 2..460 | 484 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19848-PA | 637 | GM19848-PA | 46..637 | 1..592 | 3155 | 98.8 | Plus |
Dsec\GM19924-PA | 543 | GM19924-PA | 125..539 | 2..460 | 459 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25337-PA | 654 | GD25337-PA | 63..654 | 1..592 | 3137 | 98.5 | Plus |
Dsim\GD25413-PA | 543 | GD25413-PA | 125..539 | 2..460 | 459 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19668-PA | 641 | GJ19668-PA | 48..641 | 1..592 | 2669 | 85.3 | Plus |
Dvir\GJ20674-PA | 514 | GJ20674-PA | 110..510 | 2..460 | 433 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17840-PA | 641 | GK17840-PA | 48..641 | 1..592 | 2626 | 82.5 | Plus |
Dwil\GK21343-PA | 550 | GK21343-PA | 117..546 | 2..460 | 492 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13859-PA | 701 | GE13859-PA | 46..578 | 1..531 | 2786 | 97 | Plus |
Dyak\GE13932-PA | 544 | GE13932-PA | 126..540 | 2..460 | 461 | 27.7 | Plus |
Dyak\GE13859-PA | 701 | GE13859-PA | 626..701 | 517..592 | 359 | 90.8 | Plus |