BDGP Sequence Production Resources |
Search the DGRC for RH65902
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 659 |
Well: | 2 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14618-RA |
Protein status: | RH65902.pep: gold |
Preliminary Size: | 960 |
Sequenced Size: | 1194 |
Gene | Date | Evidence |
---|---|---|
CG14618 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14618 | 2002-02-22 | Blastp of sequenced clone |
CG14618 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14618 | 2008-04-29 | Release 5.5 accounting |
CG14618 | 2008-08-15 | Release 5.9 accounting |
CG14618 | 2008-12-18 | 5.12 accounting |
1194 bp (1194 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089688
> RH65902.complete GCTTAGCCAATTGAACTACTTTTAAATACACGAGGGTAGCGGTAACGTAA AACACAACAAAAAATCTAGTAACAAGATCAATGGATACGACAGAAAAGGC TCTCAAGGAGGTGACCCCGGCGATGCTTAGCCTGAACAATTGCCCGGGCA CAACGCCCGGCACGCCGATGAGCAAAAATCAGCTTAAGAAGCAGCGAAAG CTGGCGGAGTTTGCCGAACTCCGGAAGCTGCGACGCGAACGGGAGCGTGA GAAGAAAAAGCAGAAGCGGCGGGAGGCCAAGGAGCTGGGTCTGCCCGTCC GGACGGGACCCTCCCGCAAGGAGCTGAAGAAACGCCAGTTGGCAGACGGC GGAAAGTCTGGCCTCTCGGTCGCTATAGATCTGGACTACGACGATCTGAT GCAGGAACGGGACATCGTCAAGTGCGTGAAGCAGTGCCTTCGCATCTACA CCATTAATCGGCGCAGCCCACAGCCGGGCAATCTGCACTTCACAGGCATC CGGCGCAACGGTCACATCCACGAGTCATTCAAGAAGAACGAAGGCTGGGA GAACTGGCACGTGCAGTACTACTTCGATCGCGGGCACACCGATATTTTCG AGCATAGCCAACTGGTCTACCTCACCTGCGAGTCGGATCGGGTGTTGGAC AAGCTGCAGCCCGGCTGCACCTACGTCATCGGTGGCCTGGTGGACCACAA TCACTTCAAGGGCCTGTGCCACTCGAGGGCCACGTCGGCGGGGCTGACTA CCGCTCGCCTCCCGCTTAGCGAGCATGTAGACATGAAGACGAGGGCCGTG CTGAGCACCTACCATGTGTTTGAGCTGCTGACCAAAGTTGCTGCCGGTCA GGACTGGACTACGGCCATTCTGGAAACTATTCCCATGCGCAAGGGAGCCA AGGCGAAAATCACAGACAAAAAGGAGCCGAATCATTGCTTGGAGCAGCAG GATGAAAAACAGAAACAGGAAGCTGAGTCAGATAAGCCCACCTTAACCGC CGTCGAGTCTGAAATCGAATCCCATTCTTTAGACAGTTGACGGCAGTCGA CATCGGATCTCGAGGTCTTTTTGATTTTTATTTCAGTTTTTGTTTTTACA AAATCACATTTCGTTTTGTTTCGCAATTTAAATGATAACTTATGTATTTT AAGCGCAAATAATAATAAGAATACAAAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14618-RA | 1342 | CG14618-RA | 111..1290 | 2..1181 | 5900 | 100 | Plus |
CG12576-RB | 2080 | CG12576-RB | 1890..2080 | 1181..991 | 955 | 100 | Minus |
CG12576-RA | 2595 | CG12576-RA | 2405..2595 | 1181..991 | 955 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 21869696..21870511 | 1..816 | 99 | -> | Plus |
chrX | 21870603..21870964 | 817..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14618-RA | 1..960 | 81..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14618-RA | 1..960 | 81..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14618-RA | 1..960 | 81..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14618-RA | 1..960 | 81..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14618-RA | 1..960 | 81..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14618-RA | 2..1178 | 2..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14618-RA | 1..1177 | 2..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14618-RA | 33..1210 | 1..1178 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14618-RA | 2..1178 | 2..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14618-RA | 33..1210 | 1..1178 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22473730..22474545 | 1..816 | 99 | -> | Plus |
X | 22474637..22474998 | 817..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22473730..22474545 | 1..816 | 99 | -> | Plus |
X | 22474637..22474998 | 817..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22473730..22474545 | 1..816 | 99 | -> | Plus |
X | 22474637..22474998 | 817..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 21875566..21876381 | 1..816 | 99 | -> | Plus |
arm_X | 21876473..21876834 | 817..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22458822..22459637 | 1..816 | 99 | -> | Plus |
X | 22459729..22460090 | 817..1178 | 100 | Plus |
Translation from 80 to 1039
> RH65902.pep MDTTEKALKEVTPAMLSLNNCPGTTPGTPMSKNQLKKQRKLAEFAELRKL RREREREKKKQKRREAKELGLPVRTGPSRKELKKRQLADGGKSGLSVAID LDYDDLMQERDIVKCVKQCLRIYTINRRSPQPGNLHFTGIRRNGHIHESF KKNEGWENWHVQYYFDRGHTDIFEHSQLVYLTCESDRVLDKLQPGCTYVI GGLVDHNHFKGLCHSRATSAGLTTARLPLSEHVDMKTRAVLSTYHVFELL TKVAAGQDWTTAILETIPMRKGAKAKITDKKEPNHCLEQQDEKQKQEAES DKPTLTAVESEIESHSLDS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21002-PA | 345 | GF21002-PA | 37..345 | 14..319 | 1166 | 70.2 | Plus |
Dana\GF11967-PA | 447 | GF11967-PA | 194..371 | 97..271 | 163 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19744-PA | 328 | GG19744-PA | 1..328 | 1..319 | 1362 | 85.5 | Plus |
Dere\GG21899-PA | 446 | GG21899-PA | 193..370 | 97..271 | 159 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20584-PA | 308 | GH20584-PA | 8..277 | 11..276 | 1032 | 74.4 | Plus |
Dgri\GH19713-PA | 453 | GH19713-PA | 203..380 | 97..271 | 156 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14618-PA | 319 | CG14618-PA | 1..319 | 1..319 | 1679 | 100 | Plus |
rswl-PA | 446 | CG5190-PA | 127..384 | 43..285 | 174 | 22.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19729-PA | 324 | GI19729-PA | 1..306 | 1..302 | 1039 | 67.6 | Plus |
Dmoj\GI20132-PA | 452 | GI20132-PA | 202..379 | 97..271 | 169 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13297-PA | 304 | GL13297-PA | 1..284 | 1..282 | 1132 | 80.6 | Plus |
Dper\GL17781-PA | 447 | GL17781-PA | 195..372 | 97..271 | 156 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13117-PA | 304 | GA13117-PA | 1..284 | 1..282 | 1132 | 80.6 | Plus |
Dpse\GA18723-PA | 447 | GA18723-PA | 195..372 | 97..271 | 156 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11730-PA | 314 | GM11730-PA | 1..314 | 1..319 | 1397 | 87.4 | Plus |
Dsec\GM21890-PA | 446 | GM21890-PA | 193..384 | 97..285 | 173 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17543-PA | 277 | GD17543-PA | 1..277 | 1..319 | 1138 | 75.5 | Plus |
Dsim\GD11387-PA | 446 | GD11387-PA | 193..384 | 97..285 | 175 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14967-PA | 306 | GJ14967-PA | 9..298 | 13..303 | 1062 | 71.5 | Plus |
Dvir\GJ19902-PA | 450 | GJ19902-PA | 200..377 | 97..271 | 156 | 26.1 | Plus |
Translation from 80 to 1039
> RH65902.hyp MDTTEKALKEVTPAMLSLNNCPGTTPGTPMSKNQLKKQRKLAEFAELRKL RREREREKKKQKRREAKELGLPVRTGPSRKELKKRQLADGGKSGLSVAID LDYDDLMQERDIVKCVKQCLRIYTINRRSPQPGNLHFTGIRRNGHIHESF KKNEGWENWHVQYYFDRGHTDIFEHSQLVYLTCESDRVLDKLQPGCTYVI GGLVDHNHFKGLCHSRATSAGLTTARLPLSEHVDMKTRAVLSTYHVFELL TKVAAGQDWTTAILETIPMRKGAKAKITDKKEPNHCLEQQDEKQKQEAES DKPTLTAVESEIESHSLDS*