BDGP Sequence Production Resources |
Search the DGRC for RH66493
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 664 |
Well: | 93 |
Vector: | pFlc-1 |
Associated Gene/Transcript | wash-RA |
Protein status: | RH66493.pep: gold |
Preliminary Size: | 1534 |
Sequenced Size: | 1749 |
Gene | Date | Evidence |
---|---|---|
CG13176 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13176 | 2002-05-23 | Blastp of sequenced clone |
CG13176 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13176 | 2008-04-29 | Release 5.5 accounting |
CG13176 | 2008-08-15 | Release 5.9 accounting |
CG13176 | 2008-12-18 | 5.12 accounting |
1749 bp (1749 high quality bases) assembled on 2002-05-23
GenBank Submission: AY118440
> RH66493.complete GACACTACCATGAACAGCAGTAAAATTGCAAATAAATATGTAATTATTTG GCGATAGAAAAATGGAGGAGTCACCTTACCTGCACAGCCCCTACCAGGTG GCCATTATAGCCACCGACCTGCACCACGAGGATACCATAATCCAAGCAGC CCAGTCCCTGGACTGTCTACACAAAACCATAAACTCGATTTTCGAGCGAA TCGATGCCCGCTTGGCGAGAAATGGTTCAAAGGTTGAGGACATAAACAAT CGTGTGAAGCGCGCTCAGGCAAAAATCGATGCGCTCGTTGGCTCCAAGCG GGCCATCCAGATCTTTGCACCCGCCCGCTTTCCGGCCAGCGACGTCCTGG CACCGCTGCCAGCCACCTTTCCACAGGTGGCAGCCAATCCCCTAATGGAG CAGCAAGTGGACCAGCTCCCGCAAGGGACGTACAGCAGTCACAGTGCCGC GGACCAGAAGCCGGATGATGCGGACATCTTTTTCCATGTACGTGGCGATC GGGAGCAGGAATCGCCACTGGTCGCCGAACGGAAGATAACCAATCGGACC GCTGGCCTGGGCATCCTGCCTGCGGGTGGAGTGCGCTCCGTACCCTCGCT CATGCGATTCAATACCAATGAGTTCGCCTACGGCGAGGATCTGAATGCCT GGAAGCGATCCCTACCGCCGCAAAATGCTCGACGCGTTGCCAGTCAGTCC ACTCAACTCACGGGAGAAAAGCAGCTCGCTCCGGCACCTCATTCGCTGGC CCACGGCACCACCAAACTGGCCACTCCAGCTGGGGACCTGCGCTACAATC CTGCTGCTTTGGCTGCACCCGCCATTGATGTTCCGCTGGACCTGCCCGAC CTACCGGGCATAGCGAATGATCTGCAATATGAGCCAGTGGAGGAGCAAAC ACCAATAGCGCCTTCCCAGCAGTTCGGTGATTTACCAGAGCTGCCGGATT TGGGCCTCGAGGAGCAGGATATAATAGTGCAAGCCATCGCGGCACAGACG CACATTCCGGGACCGGTGCGTAGGAAGAGTGTGGGACAATGTCCTTCGCC AGTTACGGCGGCACCACCGCCTCCTCCTCCGCCACCACCGCCGCCTCCAC CTCCTCCACCAGCGCAGACGAGCGCAATTCCATCACCGCCACCCTTTCCC ACCAAAGGAGCTGTGAAACCGCTCTCCCCGTCGTTAGCAACACCTCTTAA CATGCCGCAGCCGCCTCCAGCTACTGAAGATCCGCGATCTGAGCTTATGG CCGCCATAAGAAACGCCGGTGGAGTGCATGGCGGTCGTCTGCGGTCGCCT GCGGCTGCGCCGCTCGACGTGGTGGACAACAGTCGCTCCAAGGCGGGAGG CGCTGTCACGGGGGATTTGATGGCAGACCTGCATAACAAGCTAATGCTGC GACGCAAGGGAATTTCTGGGAGCCAGAATCCCGTGGAGGCCACTGCTGGC AATCCCCTGATGCAGCAGCTCTCCCGCGTCATACCGCCGCCGGTGCAGCC CCGCAAGGGATCTAAGTCGAGTGACGAACACTCCGAGGACGACGAGGATG GGTGGAACTAGTGAATATTTAGCTTTAGTACCGGTTTAAGTGCCTTGGCT GGCTTAAAGCACTAGCAACCTAGGTTCTCTAGCTTAAAGCATACAAATTT CTAAAACGAATTCCAAATTCTGTGCCCAAGCGAGCATGCCAAATTAGGTC AAAGTCAACCAGTTGAATAAAACTACATATTAGCAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8067856..8069588 | 2..1734 | 8650 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12180641..12182378 | 2..1739 | 8675 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12181840..12183577 | 2..1739 | 8675 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8067855..8069588 | 1..1734 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13176-RA | 1..1500 | 62..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wash-RA | 1..1500 | 62..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wash-RA | 1..1500 | 62..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13176-RA | 1..1500 | 62..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wash-RA | 1..1500 | 62..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13176-RA | 2..1734 | 2..1734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wash-RA | 2..1734 | 2..1734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wash-RA | 18..1751 | 1..1734 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13176-RA | 2..1734 | 2..1734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wash-RA | 18..1751 | 1..1734 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12180640..12182373 | 1..1734 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12180640..12182373 | 1..1734 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12180640..12182373 | 1..1734 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8068145..8069878 | 1..1734 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12181839..12183572 | 1..1734 | 99 | Plus |
Translation from 61 to 1560
> RH66493.pep MEESPYLHSPYQVAIIATDLHHEDTIIQAAQSLDCLHKTINSIFERIDAR LARNGSKVEDINNRVKRAQAKIDALVGSKRAIQIFAPARFPASDVLAPLP ATFPQVAANPLMEQQVDQLPQGTYSSHSAADQKPDDADIFFHVRGDREQE SPLVAERKITNRTAGLGILPAGGVRSVPSLMRFNTNEFAYGEDLNAWKRS LPPQNARRVASQSTQLTGEKQLAPAPHSLAHGTTKLATPAGDLRYNPAAL AAPAIDVPLDLPDLPGIANDLQYEPVEEQTPIAPSQQFGDLPELPDLGLE EQDIIVQAIAAQTHIPGPVRRKSVGQCPSPVTAAPPPPPPPPPPPPPPPP AQTSAIPSPPPFPTKGAVKPLSPSLATPLNMPQPPPATEDPRSELMAAIR NAGGVHGGRLRSPAAAPLDVVDNSRSKAGGAVTGDLMADLHNKLMLRRKG ISGSQNPVEATAGNPLMQQLSRVIPPPVQPRKGSKSSDEHSEDDEDGWN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12825-PA | 503 | GF12825-PA | 1..503 | 1..499 | 1735 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20253-PA | 501 | GG20253-PA | 1..501 | 1..499 | 2269 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22791-PA | 554 | GH22791-PA | 1..540 | 1..491 | 1280 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wash-PB | 499 | CG13176-PB | 1..499 | 1..499 | 2603 | 100 | Plus |
wash-PA | 499 | CG13176-PA | 1..499 | 1..499 | 2603 | 100 | Plus |
WASp-PC | 494 | CG1520-PC | 312..494 | 310..499 | 195 | 31.5 | Plus |
WASp-PD | 527 | CG1520-PD | 345..527 | 310..499 | 195 | 31.5 | Plus |
WASp-PB | 527 | CG1520-PB | 345..527 | 310..499 | 195 | 31.5 | Plus |
WASp-PA | 527 | CG1520-PA | 345..527 | 310..499 | 195 | 31.5 | Plus |
BOD1-PC | 1109 | CG5514-PC | 428..517 | 328..407 | 180 | 43.5 | Plus |
BOD1-PA | 1109 | CG5514-PA | 428..517 | 328..407 | 180 | 43.5 | Plus |
BOD1-PD | 1150 | CG5514-PD | 428..517 | 328..407 | 180 | 43.5 | Plus |
BOD1-PB | 1150 | CG5514-PB | 428..517 | 328..407 | 180 | 43.5 | Plus |
BOD1-PE | 1151 | CG5514-PE | 428..517 | 328..407 | 180 | 43.5 | Plus |
BOD1-PC | 1109 | CG5514-PC | 406..464 | 328..386 | 158 | 47.5 | Plus |
BOD1-PA | 1109 | CG5514-PA | 406..464 | 328..386 | 158 | 47.5 | Plus |
BOD1-PD | 1150 | CG5514-PD | 406..464 | 328..386 | 158 | 47.5 | Plus |
BOD1-PB | 1150 | CG5514-PB | 406..464 | 328..386 | 158 | 47.5 | Plus |
BOD1-PE | 1151 | CG5514-PE | 406..464 | 328..386 | 158 | 47.5 | Plus |
capu-PG | 932 | CG3399-PG | 364..432 | 328..391 | 157 | 43.5 | Plus |
capu-PB | 1049 | CG3399-PB | 481..549 | 328..391 | 157 | 43.5 | Plus |
capu-PA | 1059 | CG3399-PA | 491..559 | 328..391 | 157 | 43.5 | Plus |
capu-PJ | 1089 | CG3399-PJ | 521..589 | 328..391 | 157 | 43.5 | Plus |
capu-PH | 1107 | CG3399-PH | 539..607 | 328..391 | 157 | 43.5 | Plus |
capu-PD | 1207 | CG3399-PD | 639..707 | 328..391 | 157 | 43.5 | Plus |
capu-PE | 1280 | CG3399-PE | 712..780 | 328..391 | 157 | 43.5 | Plus |
capu-PI | 1298 | CG3399-PI | 730..798 | 328..391 | 157 | 43.5 | Plus |
capu-PF | 1361 | CG3399-PF | 793..861 | 328..391 | 157 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20587-PA | 529 | GI20587-PA | 1..502 | 1..477 | 1333 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10805-PA | 491 | GL10805-PA | 1..490 | 1..498 | 1592 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12097-PA | 491 | GA12097-PA | 1..490 | 1..498 | 1586 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21340-PA | 499 | GM21340-PA | 1..499 | 1..499 | 2378 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15403-PA | 499 | GD15403-PA | 1..499 | 1..499 | 2363 | 95.8 | Plus |
Dsim\GD15401-PA | 635 | GD15401-PA | 1..497 | 1..497 | 2309 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20767-PA | 390 | GJ20767-PA | 1..332 | 1..315 | 1045 | 65.9 | Plus |
Dvir\GJ20768-PA | 113 | GJ20768-PA | 1..112 | 396..498 | 368 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22172-PA | 512 | GK22172-PA | 3..511 | 2..499 | 1581 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12412-PA | 500 | GE12412-PA | 1..500 | 1..499 | 2294 | 93.2 | Plus |
Translation from 61 to 1560
> RH66493.hyp MEESPYLHSPYQVAIIATDLHHEDTIIQAAQSLDCLHKTINSIFERIDAR LARNGSKVEDINNRVKRAQAKIDALVGSKRAIQIFAPARFPASDVLAPLP ATFPQVAANPLMEQQVDQLPQGTYSSHSAADQKPDDADIFFHVRGDREQE SPLVAERKITNRTAGLGILPAGGVRSVPSLMRFNTNEFAYGEDLNAWKRS LPPQNARRVASQSTQLTGEKQLAPAPHSLAHGTTKLATPAGDLRYNPAAL AAPAIDVPLDLPDLPGIANDLQYEPVEEQTPIAPSQQFGDLPELPDLGLE EQDIIVQAIAAQTHIPGPVRRKSVGQCPSPVTAAPPPPPPPPPPPPPPPP AQTSAIPSPPPFPTKGAVKPLSPSLATPLNMPQPPPATEDPRSELMAAIR NAGGVHGGRLRSPAAAPLDVVDNSRSKAGGAVTGDLMADLHNKLMLRRKG ISGSQNPVEATAGNPLMQQLSRVIPPPVQPRKGSKSSDEHSEDDEDGWN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wash-PB | 499 | CG13176-PB | 1..499 | 1..499 | 2603 | 100 | Plus |
wash-PA | 499 | CG13176-PA | 1..499 | 1..499 | 2603 | 100 | Plus |
WASp-PC | 494 | CG1520-PC | 312..494 | 310..499 | 195 | 31.5 | Plus |
WASp-PD | 527 | CG1520-PD | 345..527 | 310..499 | 195 | 31.5 | Plus |
WASp-PB | 527 | CG1520-PB | 345..527 | 310..499 | 195 | 31.5 | Plus |