BDGP Sequence Production Resources |
Search the DGRC for RH67410
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 674 |
Well: | 10 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Obp19b-RA |
Protein status: | RH67410.pep: gold |
Preliminary Size: | 803 |
Sequenced Size: | 667 |
Gene | Date | Evidence |
---|---|---|
CG1670 | 2001-12-17 | Blastp of sequenced clone |
CG1670 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1670 | 2003-01-01 | Sim4 clustering to Release 3 |
Obp19b | 2008-04-29 | Release 5.5 accounting |
Obp19b | 2008-08-15 | Release 5.9 accounting |
Obp19b | 2008-12-18 | 5.12 accounting |
667 bp (667 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071763
> RH67410.complete GACTATTCACAAGAAGAGCAAAAATGATGCAGTGCAGCCGAATGACGACG ACGTTGAAGATGACGAACCTTCTGCTAGCAGTGGCCTGCGCCGCCGTGCT GATGGGATCGGCGACGGCGGACGAGGAGGAGGGGTCCATGACCGTGGACG AGGTGGTGGAGCTGATCGAGCCCTTTGGCGACGCCTGCACGCCAAAGCCG TCGAGGGAGAACATCGTCGAGATGGTGCTGAACAAGGAGGACGCCAAGCA CGAGACCAAGTGCTTCCGCCACTGCATGCTGGAGCAGTTCGAGCTGATGC CCGAGGATCAGTTGCAGTATAACGAGGACAAGACGGTCGATATGATCAAC ATGATGTTCCCGGATCGCGAGGACGACGGCAGGCGCATCGTCAAGACCTG CAACGAGGAGCTAAAGGCCGAGCAGGACAAGTGCGAGGCAGCCCACGGGA TCGCTATGTGCATGCTGCGCGAGATGCGCTCTTCGGGCTTCAAGATTCCC GAGATCAAGGAATGAGGCCATGGAGCTGCTCGCTGGCCCACCATTGCATG TTCTCCCTCCCTTTTTTTTTTGTTAGTGATTCAGTTCGATTTAATTACCA AAGCTAGAGAACTTGGAGTGGTTTCCCAAACTAATAAAGCGCCCAACCAA CAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Obp19b-RA | 659 | Obp19b-RA | 5..656 | 2..653 | 3260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20282477..20282703 | 207..433 | 1120 | 99.6 | Plus |
chrX | 22417052 | chrX | 20283085..20283305 | 431..651 | 1105 | 100 | Plus |
chrX | 22417052 | chrX | 20282207..20282412 | 2..207 | 1030 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20282478..20282700 | 208..430 | 99 | -> | Plus |
chrX | 20282206..20282412 | 1..207 | 99 | -> | Plus |
chrX | 20283085..20283305 | 431..651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19b-RA | 1..492 | 24..515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19b-RA | 1..492 | 24..515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19b-RA | 1..492 | 24..515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19b-RA | 1..492 | 24..515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19b-RA | 1..492 | 24..515 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19b-RA | 2..651 | 2..651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19b-RA | 2..651 | 2..651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19b-RA | 1..640 | 12..651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19b-RA | 2..651 | 2..651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp19b-RA | 1..640 | 12..651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20416722..20416928 | 1..207 | 99 | -> | Plus |
X | 20416994..20417216 | 208..430 | 100 | -> | Plus |
X | 20417587..20417807 | 431..651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20416722..20416928 | 1..207 | 99 | -> | Plus |
X | 20416994..20417216 | 208..430 | 100 | -> | Plus |
X | 20417587..20417807 | 431..651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20416722..20416928 | 1..207 | 99 | -> | Plus |
X | 20416994..20417216 | 208..430 | 100 | -> | Plus |
X | 20417587..20417807 | 431..651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20287749..20287955 | 1..207 | 99 | -> | Plus |
arm_X | 20288021..20288243 | 208..430 | 100 | -> | Plus |
arm_X | 20288614..20288834 | 431..651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20402086..20402308 | 208..430 | 100 | -> | Plus |
X | 20402679..20402899 | 431..651 | 100 | Plus | |
X | 20401814..20402020 | 1..207 | 99 | -> | Plus |
Translation from 2 to 514
> RH67410.hyp LFTRRAKMMQCSRMTTTLKMTNLLLAVACAAVLMGSATADEEEGSMTVDE VVELIEPFGDACTPKPSRENIVEMVLNKEDAKHETKCFRHCMLEQFELMP EDQLQYNEDKTVDMINMMFPDREDDGRRIVKTCNEELKAEQDKCEAAHGI AMCMLREMRSSGFKIPEIKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Obp19b-PA | 163 | CG1670-PA | 1..163 | 8..170 | 852 | 100 | Plus |
Translation from 23 to 514
> RH67410.pep MMQCSRMTTTLKMTNLLLAVACAAVLMGSATADEEEGSMTVDEVVELIEP FGDACTPKPSRENIVEMVLNKEDAKHETKCFRHCMLEQFELMPEDQLQYN EDKTVDMINMMFPDREDDGRRIVKTCNEELKAEQDKCEAAHGIAMCMLRE MRSSGFKIPEIKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19416-PA | 156 | GF19416-PA | 9..156 | 16..163 | 645 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19288-PA | 163 | GG19288-PA | 1..163 | 1..163 | 714 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17929-PA | 161 | GH17929-PA | 14..161 | 15..163 | 426 | 53.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Obp19b-PA | 163 | CG1670-PA | 1..163 | 1..163 | 852 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16308-PA | 157 | GI16308-PA | 28..157 | 34..163 | 438 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26841-PA | 158 | GL26841-PA | 7..158 | 13..163 | 543 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Obp19b-PA | 158 | GA14089-PA | 7..158 | 13..163 | 547 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23030-PA | 163 | GM23030-PA | 1..163 | 1..163 | 804 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17489-PA | 1505 | GD17489-PA | 1431..1505 | 89..163 | 400 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Obp19b-PA | 164 | GJ15644-PA | 2..164 | 1..163 | 457 | 54 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20146-PA | 167 | GK20146-PA | 1..166 | 1..163 | 511 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17880-PA | 163 | GE17880-PA | 1..163 | 1..163 | 702 | 85.9 | Plus |