BDGP Sequence Production Resources |
Search the DGRC for RH67738
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 677 |
Well: | 38 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG30373-RA |
Protein status: | RH67738.pep: gold |
Sequenced Size: | 623 |
Gene | Date | Evidence |
---|---|---|
CG30373 | 2002-08-25 | Blastp of sequenced clone |
CG30373 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30373 | 2008-04-29 | Release 5.5 accounting |
CG30373 | 2008-08-15 | Release 5.9 accounting |
CG30373 | 2008-12-18 | 5.12 accounting |
623 bp (623 high quality bases) assembled on 2002-08-25
GenBank Submission: BT001862
> RH67738.complete GATCTCTAAATCGTCAGCTGTTTAACCAATTTTGTTATGAAATTTGCTTG AGTTTCCCATCGAAAATGCTGCGTTTGCTTACAAAAACAAGGGTGCTGCG CCAACTGATGCCAGCGACAGGCGCCACTCCACCTGCATCCCGCTTCTATG CGAAGAACCAAGGAGCAGCCAGCCAAAAATCGGATGACGACATGGTCAGC GATGAGCCCATCAAGTTTTTCGGCAGCCAGGCGGCCACTTGGCGCGCCAA GGACACCCGCAGTGGTGGCAGCGACGAGACCCTTTGGTACCAACCCTACG TAATCTCCGCCAGCCTGGCCATCTTCCTCCTGTACTTCTGTGCGCTGCGC GAGGAGAGCGACATCGATCTCCGGTTGGAGGGCAACTTGTACGAGCATGT CAGTGGTCTGGAGGAGGTGCAGCTGACTGTCAACTACAGGTACAACAAGG AACACGGACTGGACACCAAGGAGCAGGAGAGACGGCTCAGGGAACTGGGC GTTGATCTGGGCCAGTTGGATGCCAAGTTGGCCGCCCAGTAGTCGTAGGG TTGGTTTGTTGTACGTTTTTGTTTCGTTAAGTGAAATTAAACATTTTTAA TAACTAGAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4051519..4052025 | 101..607 | 100 | <- | Minus |
chr2R | 4052087..4052185 | 1..100 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30373-RA | 1..477 | 66..542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30373-RA | 1..477 | 66..542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30373-RA | 1..477 | 66..542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30373-RA | 1..477 | 66..542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30373-RA | 1..477 | 66..542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30373-RA | 1..606 | 2..607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30373-RA | 1..606 | 2..607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30373-RA | 4..610 | 1..607 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30373-RA | 1..606 | 2..607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30373-RA | 4..610 | 1..607 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8164000..8164506 | 101..607 | 100 | <- | Minus |
2R | 8164568..8164666 | 1..100 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8164000..8164506 | 101..607 | 100 | <- | Minus |
2R | 8164568..8164666 | 1..100 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8164000..8164506 | 101..607 | 100 | <- | Minus |
2R | 8164568..8164666 | 1..100 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4051505..4052011 | 101..607 | 100 | <- | Minus |
arm_2R | 4052073..4052171 | 1..100 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8165199..8165705 | 101..607 | 100 | <- | Minus |
2R | 8165767..8165865 | 1..100 | 99 | Minus |
Translation from 2 to 541
> RH67738.hyp SLNRQLFNQFCYEICLSFPSKMLRLLTKTRVLRQLMPATGATPPASRFYA KNQGAASQKSDDDMVSDEPIKFFGSQAATWRAKDTRSGGSDETLWYQPYV ISASLAIFLLYFCALREESDIDLRLEGNLYEHVSGLEEVQLTVNYRYNKE HGLDTKEQERRLRELGVDLGQLDAKLAAQ*
Translation from 65 to 541
> RH67738.pep MLRLLTKTRVLRQLMPATGATPPASRFYAKNQGAASQKSDDDMVSDEPIK FFGSQAATWRAKDTRSGGSDETLWYQPYVISASLAIFLLYFCALREESDI DLRLEGNLYEHVSGLEEVQLTVNYRYNKEHGLDTKEQERRLRELGVDLGQ LDAKLAAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11204-PA | 157 | GF11204-PA | 1..157 | 1..158 | 658 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10667-PA | 157 | GG10667-PA | 1..157 | 1..158 | 767 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20829-PA | 156 | GH20829-PA | 1..156 | 1..158 | 617 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30373-PB | 158 | CG30373-PB | 1..158 | 1..158 | 808 | 100 | Plus |
CG30373-PA | 158 | CG30373-PA | 1..158 | 1..158 | 808 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20929-PA | 157 | GI20929-PA | 1..156 | 1..156 | 637 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10884-PA | 155 | GL10884-PA | 1..154 | 1..157 | 609 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15796-PA | 155 | GA15796-PA | 1..154 | 1..157 | 613 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20712-PA | 158 | GM20712-PA | 1..158 | 1..158 | 826 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10179-PA | 158 | GD10179-PA | 1..158 | 1..158 | 830 | 98.7 | Plus |
Dsim\GD15290-PA | 144 | GD15290-PA | 1..144 | 15..158 | 764 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20656-PA | 158 | GJ20656-PA | 1..158 | 1..158 | 614 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19096-PA | 159 | GK19096-PA | 1..159 | 1..158 | 594 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23234-PA | 156 | GE23234-PA | 1..156 | 1..158 | 779 | 93 | Plus |