BDGP Sequence Production Resources |
Search the DGRC for RH68464
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 684 |
Well: | 64 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9914-RA |
Protein status: | RH68464.pep: gold |
Preliminary Size: | 1038 |
Sequenced Size: | 1287 |
Gene | Date | Evidence |
---|---|---|
CG9914 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9914 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9914 | 2003-05-20 | Blastp of sequenced clone |
CG9914 | 2008-04-29 | Release 5.5 accounting |
CG9914 | 2008-08-15 | Release 5.9 accounting |
CG9914 | 2008-12-18 | 5.12 accounting |
1287 bp (1287 high quality bases) assembled on 2003-05-20
GenBank Submission: BT009948
> RH68464.complete GAAAACGCATGTACGCTGTGCCAAGTGGCGGTCGACAGCAATAGCTCCTC CATAGCTCCTTCTTAAATCCAACTCCACCGAAGTAAATCGGCAAAAGTAA ATAAACAAAGATGTCGGCAAAGAACGAGAAAGTTGGCATTGTGGGCAGCG GTCTAATTGGTCGCTCCTGGTCCATGCTGTTCGCCTCGGTGGGCTACCAG GTGGTGCTGTACGACATCCTGCCCGAGCAGGTGTCCACCGCTCTGACTGC CACGCAGAAGGAGCTGCAGGATCTGGAGGCCAAGGGCCTGCTACGCGGCA AACTGACCGCCGCCCAGCAATTCGCCTGCATCTCCGGCACCAACGACCTC AAGGAGCTGGTCAAGGGCGCCATCTTCGTCCAGGAGTGCATCCCCGAGCG TCTCGATCTGAAAAAGGCGCTCTACAAGCAGTTGGACGCCGTCGTCGGAC CCAACACCATCCTCTCCAGCTCCACCAGCACTTTTCTGCCCTCCCTCTTC AGCGCGGATCTGAAAAACAAGGCCAATGTTTTGGTCTCGCATCCCGTCAA CCCACCGTACTACGTGCCTCTGGTCGAGATCGTGCCTGCGCCGTGGACGA AACCGGAATGGGTGAAGAAGACCCGTGCCCTGATGGAGGAGATTGGCCAG AAACCAGTTACGCTGTCGCGGGAGATCGAGGGCTTCGCCCTCAACCGCAT CCAGTATGCCATCCTGAACGAGACATGGCGTTTGGTCGAGGCCGGCATCC TGAATGTCAAGGACATCGATAGCGTGATGAGCAATGGACTGGGACCGCGC TACGCCTTCCTGGGTCCCCTGGAGACGGCCCATCTGAATGCCGAGGGCAT GGCCAACTATTTCGAACGCTACTCGAACACCATCTATGCGGTTAGCGAGA CAATGGGACCGACACCGAAAATGGAGGGCCCCGTCGCCGTCGAGGTGGCC AAGCAGCTGGGCGAGATGGTGCCGCTGGATCAGTTGGCCCAACGCCGCAA CTACCGCGACAACTGCCTCACCCAGTTGAGCATTCTCAAGAACAAGCTCA ACCAGTAAACTCATTATTATCTTGCTGCTGCGTTTTTTTTTTTTTGTTTT TTCTTCATTGTTGTGATATGCTAGCGCCACATACGTTAAATATACGGAAA TTGCTTAACTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16196616..16197251 | 1163..528 | 3180 | 100 | Minus |
chrX | 22417052 | chrX | 16197492..16197875 | 529..146 | 1905 | 99.7 | Minus |
chrX | 22417052 | chrX | 16197942..16198087 | 148..3 | 715 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 16315008..16315645 | 1165..528 | 3190 | 100 | Minus |
X | 23527363 | X | 16315886..16316269 | 529..146 | 1920 | 100 | Minus |
X | 23527363 | X | 16316336..16316481 | 148..3 | 730 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16196616..16197251 | 528..1163 | 100 | <- | Minus |
chrX | 16197494..16197872 | 149..527 | 99 | <- | Minus |
chrX | 16197942..16198087 | 1..148 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9914-RA | 1..948 | 111..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9914-RA | 1..948 | 111..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9914-RA | 1..948 | 111..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9914-RA | 1..948 | 111..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9914-RA | 1..948 | 111..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9914-RA | 1..1161 | 3..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9914-RA | 1..1161 | 3..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9914-RA | 9..1171 | 1..1163 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9914-RA | 1..1107 | 3..1109 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9914-RA | 9..1171 | 1..1163 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16306912..16307547 | 528..1163 | 100 | <- | Minus |
X | 16307790..16308168 | 149..527 | 100 | <- | Minus |
X | 16308238..16308383 | 1..148 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16306912..16307547 | 528..1163 | 100 | <- | Minus |
X | 16307790..16308168 | 149..527 | 100 | <- | Minus |
X | 16308238..16308383 | 1..148 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16306912..16307547 | 528..1163 | 100 | <- | Minus |
X | 16307790..16308168 | 149..527 | 100 | <- | Minus |
X | 16308238..16308383 | 1..148 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16200945..16201580 | 528..1163 | 100 | <- | Minus |
arm_X | 16201823..16202201 | 149..527 | 100 | <- | Minus |
arm_X | 16202271..16202416 | 1..148 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16315010..16315645 | 528..1163 | 100 | <- | Minus |
X | 16315888..16316266 | 149..527 | 100 | <- | Minus |
X | 16316336..16316481 | 1..148 | 98 | Minus |
Translation from 110 to 1057
> RH68464.hyp MSAKNEKVGIVGSGLIGRSWSMLFASVGYQVVLYDILPEQVSTALTATQK ELQDLEAKGLLRGKLTAAQQFACISGTNDLKELVKGAIFVQECIPERLDL KKALYKQLDAVVGPNTILSSSTSTFLPSLFSADLKNKANVLVSHPVNPPY YVPLVEIVPAPWTKPEWVKKTRALMEEIGQKPVTLSREIEGFALNRIQYA ILNETWRLVEAGILNVKDIDSVMSNGLGPRYAFLGPLETAHLNAEGMANY FERYSNTIYAVSETMGPTPKMEGPVAVEVAKQLGEMVPLDQLAQRRNYRD NCLTQLSILKNKLNQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9914-PB | 315 | CG9914-PB | 1..315 | 1..315 | 1603 | 100 | Plus |
CG9914-PA | 315 | CG9914-PA | 1..315 | 1..315 | 1603 | 100 | Plus |
CG10131-PA | 315 | CG10131-PA | 3..313 | 5..312 | 884 | 55.9 | Plus |
Mtpalpha-PB | 744 | CG4389-PB | 337..545 | 8..220 | 175 | 26.3 | Plus |
Mtpalpha-PA | 783 | CG4389-PA | 376..584 | 8..220 | 175 | 26.3 | Plus |
Translation from 110 to 1057
> RH68464.pep MSAKNEKVGIVGSGLIGRSWSMLFASVGYQVVLYDILPEQVSTALTATQK ELQDLEAKGLLRGKLTAAQQFACISGTNDLKELVKGAIFVQECIPERLDL KKALYKQLDAVVGPNTILSSSTSTFLPSLFSADLKNKANVLVSHPVNPPY YVPLVEIVPAPWTKPEWVKKTRALMEEIGQKPVTLSREIEGFALNRIQYA ILNETWRLVEAGILNVKDIDSVMSNGLGPRYAFLGPLETAHLNAEGMANY FERYSNTIYAVSETMGPTPKMEGPVAVEVAKQLGEMVPLDQLAQRRNYRD NCLTQLSILKNKLNQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19071-PA | 317 | GF19071-PA | 1..315 | 1..315 | 1555 | 92.1 | Plus |
Dana\GF11336-PA | 315 | GF11336-PA | 3..315 | 5..314 | 949 | 58.1 | Plus |
Dana\GF21951-PA | 1092 | GF21951-PA | 689..893 | 8..220 | 155 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19334-PA | 315 | GG19334-PA | 1..315 | 1..315 | 1648 | 98.7 | Plus |
Dere\GG20470-PA | 315 | GG20470-PA | 3..315 | 5..314 | 923 | 55.3 | Plus |
Dere\GG24022-PA | 783 | GG24022-PA | 376..584 | 8..220 | 186 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12278-PA | 318 | GH12278-PA | 6..317 | 4..315 | 1394 | 82.4 | Plus |
Dgri\GH22921-PA | 315 | GH22921-PA | 3..314 | 5..313 | 925 | 56.7 | Plus |
Dgri\GH11058-PA | 785 | GH11058-PA | 376..604 | 6..245 | 166 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Had1-PB | 315 | CG9914-PB | 1..315 | 1..315 | 1603 | 100 | Plus |
Had1-PA | 315 | CG9914-PA | 1..315 | 1..315 | 1603 | 100 | Plus |
Had2-PA | 315 | CG10131-PA | 3..313 | 5..312 | 884 | 55.9 | Plus |
Mtpalpha-PB | 744 | CG4389-PB | 337..545 | 8..220 | 175 | 26.3 | Plus |
Mtpalpha-PA | 783 | CG4389-PA | 376..584 | 8..220 | 175 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10976-PA | 313 | GI10976-PA | 3..310 | 7..314 | 1415 | 85.7 | Plus |
Dmoj\GI18410-PA | 315 | GI18410-PA | 3..314 | 5..313 | 999 | 59.6 | Plus |
Dmoj\GI17575-PA | 791 | GI17575-PA | 384..633 | 8..256 | 158 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21343-PA | 318 | GL21343-PA | 6..316 | 4..314 | 1518 | 91.3 | Plus |
Dper\GL11451-PA | 318 | GL11451-PA | 3..318 | 2..314 | 1001 | 59.5 | Plus |
Dper\GL19219-PA | 787 | GL19219-PA | 380..588 | 8..220 | 177 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23040-PA | 318 | GA23040-PA | 6..316 | 4..314 | 1520 | 91.6 | Plus |
Dpse\GA10097-PA | 318 | GA10097-PA | 3..318 | 2..314 | 998 | 59.2 | Plus |
Dpse\GA18151-PA | 787 | GA18151-PA | 380..588 | 8..220 | 176 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13412-PA | 318 | GM13412-PA | 6..318 | 3..315 | 1640 | 98.7 | Plus |
Dsec\GM21560-PA | 315 | GM21560-PA | 3..315 | 5..314 | 938 | 56.2 | Plus |
Dsec\GM12408-PA | 783 | GM12408-PA | 376..584 | 8..220 | 175 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11066-PA | 315 | GD11066-PA | 3..315 | 5..314 | 938 | 56.2 | Plus |
Dsim\GD24495-PA | 153 | GD24495-PA | 2..153 | 164..315 | 799 | 98 | Plus |
Dsim\GD22351-PA | 783 | GD22351-PA | 376..584 | 8..220 | 175 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18534-PA | 318 | GJ18534-PA | 4..316 | 2..314 | 1414 | 83.7 | Plus |
Dvir\GJ21492-PA | 315 | GJ21492-PA | 3..314 | 5..313 | 992 | 58.7 | Plus |
Dvir\GJ17917-PA | 788 | GJ17917-PA | 381..589 | 8..220 | 159 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25055-PA | 316 | GK25055-PA | 5..316 | 4..315 | 1472 | 87.5 | Plus |
Dwil\GK19629-PA | 315 | GK19629-PA | 3..315 | 5..314 | 949 | 57.8 | Plus |
Dwil\GK23812-PA | 796 | GK23812-PA | 387..595 | 8..220 | 166 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11007-PA | 315 | GE11007-PA | 1..315 | 1..315 | 1641 | 98.1 | Plus |
Dyak\GE13601-PA | 315 | GE13601-PA | 3..315 | 5..314 | 926 | 55.3 | Plus |
Dyak\GE10479-PA | 783 | GE10479-PA | 376..584 | 8..220 | 176 | 27.2 | Plus |