BDGP Sequence Production Resources |
Search the DGRC for RH69145
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 691 |
Well: | 45 |
Vector: | pFlc-1 |
Associated Gene/Transcript | bbx-RB |
Protein status: | RH69145.pep: gold |
Preliminary Size: | 2310 |
Sequenced Size: | 3381 |
Gene | Date | Evidence |
---|---|---|
CG1414 | 2002-01-01 | Sim4 clustering to Release 2 |
CG32527 | 2002-03-28 | Blastp of sequenced clone |
CG32527 | 2003-01-01 | Sim4 clustering to Release 3 |
bbx | 2008-04-29 | Release 5.5 accounting |
bbx | 2008-08-15 | Release 5.9 accounting |
waw | 2008-08-15 | Release 5.9 accounting |
bbx | 2008-12-18 | 5.12 accounting |
waw | 2008-12-18 | 5.12 accounting |
3381 bp (3381 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094952
> RH69145.complete GAGTCAGTTTTCATTCTCATTTGACATCATCAACATTGAAATTTAATTAA ACGAGAGCAGTCTTCGGTTCGAGGCAATAATATCATTCAACGTAATATGT TTGAGGATCGGGACTAGACAAGTAGGTGGAAAACGAAAGCTAAGAACATG ATCAACGGCCTGAGCGTTGGCGGTGGTCAGCAGGTGGCGCAGGTGACGCC AACAGGTGCTGCAATTAAATTGCACTTTGCCTACAACAACAACAGCAACA ACAGTAGCAGCAGCAACATCAGCAACAGCAACTACAGTGGCCTTAAAACA TCGGAGACGAAAATGAGGAACAACAAGAACTACACAGGCAGAGCGCTGAA AATAGTTGAGAAGATACCGGGAGCAAGTGGAGTAATCGCCACAACGAGCG GCAACCAAGGAGCAAGAAGCCTTGAGGGATATTCTCCGGCAGCGGCATCT TACGTTTCGGGCTTGTCCAGGGACTTTTTGATATCCAGAGAACTTTCCCA AAGATCAGGAGAATTCCTGACAGCTGCTGCAAAGATGGTATCCCAAATGG GAGCAAGCGAACTCCGCTGGCTCCCCATATCCAGGACCAAAGACAAACCA TCGAGCGCAGGAGAAGCAGAAGCTAAAACATTAGTCAGAGAAGGTGAATC ACAAGGATCGCCTGGTAAAGTTGCCAAAAGTGCCTTAGGTGACCCCCAGC CGCAGCGCACCGAAGACCAAGAAAATGCCTTTCGGCGCATCGAGGATGTG CACAACTATGCCAAGTTGCAGGACTGCAGCAGCGACACTGACGACGAGGA CGACGAAGAGGAAGATCTCGATGAAGAGGAGGATGATGAGGAGGAGGCGG AGATCCAAGTGCAGTTGCCTGTGCAGCAGGAGGTCACGCGCATTCGTCGC GAGGCCGCCGAAGAGCATGTGGACGTGGACGTGGTCACAGTGCCGCAGCA GGAGCAGGATCAGTATAGCCATCAAGTAGAGCCGCGACAGCTTCAGCAGG ATGAGACAGCGGATAACACACGGCCGGAGCATCATGCCCGCCGACCCATG AATGCCTTCCTCATATTCTGCAAGAGACATCGCGGTATCGTCAAGGAGCG TTACAAAACTTTGGAGAACCGTGCCATTACAAAGATACTTGGCGACTGGT GGGCCGCTCTCGACGAGCAGGAGAAACACTGCTTCACGGATCTGGCACAG CAGAACAAGGACGCCTTCTTCAATGCTAATCCAAACTTCAAGTGGTACAA ACTGCCAGCTCCGCCGCTGCGAACGCTAGCTACCCGTCCCAGCAACGCGT CTGCTGGCTTGCTCATACCCAGTGAAGATCAGCCACAGCAGCAGGTGCCG ACTTCACTGCAAGTGCAGTGGGCAGAGCGAGGGGAGATGCCGCGTGCTAT GCTGCGCCCCAACTACTTTAAACTGGCAGACGAAACGCAGATGGGCGAGC TAAGCTCCCTACTGCAAGTTCAAGTACAAGAAAAGGACTTCGCCCTACAG CAGGTGCTCAGCGAGACCAGCCAGTTTCTATCTGCCCATATGCCAGCTGG CAATACAAATGGGAATGGCAATAAGCGCTCCTTGCAGGACAACAACTCGA GCAACTCCAGCGAGGAGGAGGCGGCCAGTGGTAGCTCGCCAAACAAGAAG GTCAAGTCATCACGCTCCTGCAAGGGCAAGATTTACCAGGAATTGGTCAA TTCCGGTCAATTGGCGGCCATAGCTAAGAAGAGCAAAGCTCGCTTGCCGC CGGCAGGTAACATGGGTGGAAACTTTGTGGACATCCCCTTGGATGCGGGA CCCAATACACCGCCCGTTTCGCCACCGGAACGTCAGGGTAGCAGTCCGGA TTCCATGCAAAAACATATAAGAAGCGTTTCCGAGTCAAGCAGCAGTGGTT TCTTTGATCTCGAGGAGAAAATCAAAGAGCTGCCAGCCCTCAGCTTGGAC GCTTACCTGCAGCGCAAACGTAGCACCAAAAAGAAGAAGAAGTTTAGCGG CACCAAGAAACAGAGGAATTCGAACAGCACAAGTGGTGCATCAGCAACTT CGAATGTGGCAGCAGCAGATGCTGCGGCGAAAGGTGCTGTCCCATTATCT AGCGAGCAACACGTGAGGATCAAGCAGCAGCAACTGCAGGCTGTGGGAAG CCAGCGACGAAAGGCGCGCAAGGAAAGTATCACCCGGCGCGATGTTAGTG CCATTGAACAGGAGGTGGCCTCAATTCTGCCCCTGACCATCAATGGCAGC TACTACTTTAACCAGAGCGGTGCTCCCAAGGCGGTGAATGCCCCTGTAAC CTCGTCGTCGGCCTCGCCACCGCTCTCTTCGAACTCCTCGTCGTCATCCT CCTCGCTCTCCTCGCAGGCGGCCTTCGACGTGACCTCCTCTACCTCAGAT CTACTCATTCTGGCCGAAGTGGCCGCCAACCGCACTGAGCTGACCAAGTC CAACTAGCGCCTGCAACACCAATAACATCAGCAGCACCACTGGCTGTCCA GCATTACCACCAAATAGTTAGCCCAAATCAAAATAGCGAACTGCAAGATT GTCATACTTGGGGAAGACATATTCACATATGTATATCCTGTTGCAATAAT TTGAAATTATGTTTAGATATTTAAACTATTCCCTGTTTACCTTATTATAT AGTTTTTAGGAAAGCAAAAGAGCATGTCCTTAGCAGTTATTCATATCATC ATTCATTACGTCAGAGCTGAGGAATAATACTTTATATTTTATTTACATAC ATATATAGATAGGTTTTACATGTTTTTCGGGCTATGTTGCACACATATCC AAAATATTCAGTTCATATCCGCACAACTGTGCATTAATATTCAATTGTTT TAACATTGTCGCATCAATCGAAAACCTTAAACTGAATTTGTCGCCCTTAT GATAGTCTTGCGGTCAAGTTAAGCACCCATTTTCGATACTTACGATGCTT AAAGCTATTTGCTGGTGGTGCCCAATGGAGATGGAAAAACAGACATTCGT TGATCTACAATTTAGTCAATAATATTATGTAATAACAGAAAATCAAGCCA GCCGAAGAGAATGCGAGAAGAGAGTCGCGGCGATAGCGAATTATGTATTG TTTGTTATGACGGCGGTAGGAGGAGACCCGAGTCAGTTTCACACGCATAT ATCTATGTATATATTTGGTATTTAAATAACTTGTTCTGTTTTTTTCTTGT TAAGTTTCTCCTTTTTCGGGCCGCGTTCGCTAAGCAGCAAAATCAACAGC AGCGGTCGCTCATTAAATGTTAATTATTATTATTTCTAATATGTAGTCGT AACTTATTGCTATATTTGTCGAAACGCAAACAATTTGCAAACAAAAATAT ATTCATTTTAAAATGGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 21236139..21238303 | 1202..3366 | 10825 | 100 | Plus |
chrX | 22417052 | chrX | 21234850..21235880 | 91..1121 | 5155 | 100 | Plus |
chrX | 22417052 | chrX | 21233195..21233283 | 2..90 | 445 | 100 | Plus |
chrX | 22417052 | chrX | 21235950..21236032 | 1121..1203 | 415 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 21370981..21373148 | 1202..3369 | 10840 | 100 | Plus |
X | 23542271 | X | 21369692..21370722 | 91..1121 | 5155 | 100 | Plus |
X | 23542271 | X | 21368037..21368125 | 2..90 | 445 | 100 | Plus |
X | 23542271 | X | 21370792..21370874 | 1121..1203 | 415 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 21356073..21358240 | 1202..3369 | 10840 | 100 | Plus |
X | 23527363 | X | 21354784..21355814 | 91..1121 | 5155 | 100 | Plus |
X | 23527363 | X | 21353129..21353217 | 2..90 | 445 | 100 | Plus |
X | 23527363 | X | 21355884..21355966 | 1121..1203 | 415 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 21235951..21236032 | 1122..1203 | 100 | -> | Plus |
chrX | 21233194..21233283 | 1..90 | 98 | -> | Plus |
chrX | 21234850..21235880 | 91..1121 | 100 | -> | Plus |
chrX | 21236141..21238303 | 1204..3366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bbx-RC | 1..2310 | 148..2457 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bbx-RC | 1..2310 | 148..2457 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bbx-RC | 1..2310 | 148..2457 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bbx-RC | 1..2310 | 148..2457 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bbx-RC | 1..2310 | 148..2457 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bbx-RC | 2..3366 | 2..3366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bbx-RC | 2..3366 | 2..3366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bbx-RC | 2..3366 | 2..3366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bbx-RC | 2..3366 | 2..3366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bbx-RC | 1..3363 | 4..3366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21370793..21370874 | 1122..1203 | 100 | -> | Plus |
X | 21368036..21368125 | 1..90 | 98 | -> | Plus |
X | 21369692..21370722 | 91..1121 | 100 | -> | Plus |
X | 21370983..21373145 | 1204..3366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21370793..21370874 | 1122..1203 | 100 | -> | Plus |
X | 21368036..21368125 | 1..90 | 98 | -> | Plus |
X | 21369692..21370722 | 91..1121 | 100 | -> | Plus |
X | 21370983..21373145 | 1204..3366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21370793..21370874 | 1122..1203 | 100 | -> | Plus |
X | 21368036..21368125 | 1..90 | 98 | -> | Plus |
X | 21369692..21370722 | 91..1121 | 100 | -> | Plus |
X | 21370983..21373145 | 1204..3366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 21239063..21239152 | 1..90 | 98 | -> | Plus |
arm_X | 21240719..21241749 | 91..1121 | 100 | -> | Plus |
arm_X | 21241820..21241901 | 1122..1203 | 100 | -> | Plus |
arm_X | 21242010..21244172 | 1204..3366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21354784..21355814 | 91..1121 | 100 | -> | Plus |
X | 21355885..21355966 | 1122..1203 | 100 | -> | Plus |
X | 21356075..21358237 | 1204..3366 | 100 | Plus | |
X | 21353128..21353217 | 1..90 | 98 | -> | Plus |
Translation from 147 to 2456
> RH69145.pep MINGLSVGGGQQVAQVTPTGAAIKLHFAYNNNSNNSSSSNISNSNYSGLK TSETKMRNNKNYTGRALKIVEKIPGASGVIATTSGNQGARSLEGYSPAAA SYVSGLSRDFLISRELSQRSGEFLTAAAKMVSQMGASELRWLPISRTKDK PSSAGEAEAKTLVREGESQGSPGKVAKSALGDPQPQRTEDQENAFRRIED VHNYAKLQDCSSDTDDEDDEEEDLDEEEDDEEEAEIQVQLPVQQEVTRIR REAAEEHVDVDVVTVPQQEQDQYSHQVEPRQLQQDETADNTRPEHHARRP MNAFLIFCKRHRGIVKERYKTLENRAITKILGDWWAALDEQEKHCFTDLA QQNKDAFFNANPNFKWYKLPAPPLRTLATRPSNASAGLLIPSEDQPQQQV PTSLQVQWAERGEMPRAMLRPNYFKLADETQMGELSSLLQVQVQEKDFAL QQVLSETSQFLSAHMPAGNTNGNGNKRSLQDNNSSNSSEEEAASGSSPNK KVKSSRSCKGKIYQELVNSGQLAAIAKKSKARLPPAGNMGGNFVDIPLDA GPNTPPVSPPERQGSSPDSMQKHIRSVSESSSSGFFDLEEKIKELPALSL DAYLQRKRSTKKKKKFSGTKKQRNSNSTSGASATSNVAAADAAAKGAVPL SSEQHVRIKQQQLQAVGSQRRKARKESITRRDVSAIEQEVASILPLTING SYYFNQSGAPKAVNAPVTSSSASPPLSSNSSSSSSSLSSQAAFDVTSSTS DLLILAEVAANRTELTKSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20922-PA | 816 | GF20922-PA | 2..816 | 7..769 | 1729 | 57.3 | Plus |
Dana\GF17645-PA | 1819 | GF17645-PA | 504..572 | 298..366 | 213 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19727-PA | 766 | GG19727-PA | 1..766 | 1..769 | 3116 | 89.3 | Plus |
Dere\GG23823-PA | 1409 | GG23823-PA | 498..566 | 298..366 | 215 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24815-PA | 474 | GH24815-PA | 26..474 | 351..769 | 821 | 55.3 | Plus |
Dgri\GH23191-PA | 186 | GH23191-PA | 12..186 | 187..325 | 230 | 38.8 | Plus |
Dgri\GH23608-PA | 1534 | GH23608-PA | 559..627 | 298..366 | 213 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bbx-PE | 769 | CG1414-PE | 1..769 | 1..769 | 3881 | 100 | Plus |
bbx-PD | 769 | CG1414-PD | 1..769 | 1..769 | 3881 | 100 | Plus |
bbx-PC | 769 | CG1414-PC | 1..769 | 1..769 | 3881 | 100 | Plus |
bbx-PB | 769 | CG1414-PB | 1..769 | 1..769 | 3881 | 100 | Plus |
cic-PH | 1275 | CG43122-PH | 240..428 | 217..387 | 210 | 27 | Plus |
cic-PA | 1403 | CG5067-PA | 392..580 | 217..387 | 210 | 27 | Plus |
cic-PC | 1427 | CG43122-PC | 392..580 | 217..387 | 210 | 27 | Plus |
cic-PB | 1832 | CG5067-PB | 392..580 | 217..387 | 210 | 27 | Plus |
cic-PD | 2141 | CG43122-PD | 1130..1318 | 217..387 | 210 | 27 | Plus |
cic-PG | 2150 | CG43122-PG | 1134..1322 | 217..387 | 210 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21541-PA | 601 | GI21541-PA | 190..551 | 187..511 | 859 | 56.9 | Plus |
Dmoj\GI21542-PA | 218 | GI21542-PA | 16..218 | 586..769 | 328 | 55.4 | Plus |
Dmoj\GI22721-PA | 1417 | GI22721-PA | 515..583 | 298..366 | 171 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20956-PA | 408 | GL20956-PA | 46..408 | 418..769 | 736 | 61.5 | Plus |
Dper\GL20955-PA | 269 | GL20955-PA | 107..268 | 177..338 | 470 | 63.6 | Plus |
Dper\GL12097-PA | 1163 | GL12097-PA | 530..598 | 298..366 | 203 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16961-PA | 798 | GA16961-PA | 189..798 | 184..769 | 1467 | 62 | Plus |
Dpse\GA30228-PB | 1450 | GA30228-PB | 552..620 | 298..366 | 208 | 46.4 | Plus |
Dpse\GA30228-PC | 1874 | GA30228-PC | 546..614 | 298..366 | 208 | 46.4 | Plus |
Dpse\GA30228-PA | 2156 | GA30228-PA | 1258..1326 | 298..366 | 206 | 46.4 | Plus |
Dpse\GA30228-PD | 858 | GA30228-PD | 552..620 | 298..366 | 205 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23082-PA | 789 | GM23082-PA | 1..789 | 1..769 | 3013 | 90 | Plus |
Dsec\GM23104-PA | 1398 | GM23104-PA | 487..555 | 298..366 | 215 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17533-PA | 708 | GD17533-PA | 1..708 | 1..769 | 3383 | 86.2 | Plus |
Dsim\GD19345-PA | 1406 | GD19345-PA | 495..563 | 298..366 | 214 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16014-PA | 793 | GJ16014-PA | 332..793 | 289..769 | 1224 | 60.8 | Plus |
Dvir\GJ23448-PA | 1467 | GJ23448-PA | 520..588 | 298..366 | 215 | 47.8 | Plus |
Translation from 147 to 2456
> RH69145.hyp MINGLSVGGGQQVAQVTPTGAAIKLHFAYNNNSNNSSSSNISNSNYSGLK TSETKMRNNKNYTGRALKIVEKIPGASGVIATTSGNQGARSLEGYSPAAA SYVSGLSRDFLISRELSQRSGEFLTAAAKMVSQMGASELRWLPISRTKDK PSSAGEAEAKTLVREGESQGSPGKVAKSALGDPQPQRTEDQENAFRRIED VHNYAKLQDCSSDTDDEDDEEEDLDEEEDDEEEAEIQVQLPVQQEVTRIR REAAEEHVDVDVVTVPQQEQDQYSHQVEPRQLQQDETADNTRPEHHARRP MNAFLIFCKRHRGIVKERYKTLENRAITKILGDWWAALDEQEKHCFTDLA QQNKDAFFNANPNFKWYKLPAPPLRTLATRPSNASAGLLIPSEDQPQQQV PTSLQVQWAERGEMPRAMLRPNYFKLADETQMGELSSLLQVQVQEKDFAL QQVLSETSQFLSAHMPAGNTNGNGNKRSLQDNNSSNSSEEEAASGSSPNK KVKSSRSCKGKIYQELVNSGQLAAIAKKSKARLPPAGNMGGNFVDIPLDA GPNTPPVSPPERQGSSPDSMQKHIRSVSESSSSGFFDLEEKIKELPALSL DAYLQRKRSTKKKKKFSGTKKQRNSNSTSGASATSNVAAADAAAKGAVPL SSEQHVRIKQQQLQAVGSQRRKARKESITRRDVSAIEQEVASILPLTING SYYFNQSGAPKAVNAPVTSSSASPPLSSNSSSSSSSLSSQAAFDVTSSTS DLLILAEVAANRTELTKSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bbx-PE | 769 | CG1414-PE | 1..769 | 1..769 | 3881 | 100 | Plus |
bbx-PD | 769 | CG1414-PD | 1..769 | 1..769 | 3881 | 100 | Plus |
bbx-PC | 769 | CG1414-PC | 1..769 | 1..769 | 3881 | 100 | Plus |
bbx-PB | 769 | CG1414-PB | 1..769 | 1..769 | 3881 | 100 | Plus |
cic-PH | 1275 | CG43122-PH | 240..428 | 217..387 | 210 | 27 | Plus |