BDGP Sequence Production Resources |
Search the DGRC for RH69586
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 695 |
Well: | 86 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Prx2540-2-RA |
Protein status: | RH69586.pep: gold |
Preliminary Size: | 727 |
Sequenced Size: | 870 |
Gene | Date | Evidence |
---|---|---|
CG11765 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11765 | 2002-03-28 | Blastp of sequenced clone |
CG11765 | 2003-01-01 | Sim4 clustering to Release 3 |
Prx2540-2 | 2008-04-29 | Release 5.5 accounting |
Prx2540-2 | 2008-08-15 | Release 5.9 accounting |
Prx2540-2 | 2008-12-18 | 5.12 accounting |
870 bp (870 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094953
> RH69586.complete GATTCAGTAAGCAACAAGTGTGCGAGCTAAAAGCAGCTACCAGTTGAGCA ACTAAGTTTTTTTGAAACTAATAATCAAACAGCAAGATGCGTTTGGGACA GACCGTACCTAACTTCGAGGCCGACACAACCAAGGGGCCCATTAAATTCC ACGAGTGGCAGGGCAACTCCTGGGTGGTGCTCTTCTCTCACCCCGCCGAC TTTACTCCCGTCTGCACCACTGAGCTGGGCAGGATTGCGGTGCACCAGCC GGAGTTTGCCAAGCGGAACACCAAGTGCCTGGCACATTCCGTTGACGCAT TGAACTCGCACGTGGACTGGGTGAACGACATCAAGAGCTATTGCCTGGAC ATTCCCGGGGACTTCCCCTACCCGATCATCGCCGACCCTACTCGCGACCT GGCCGTCAGCCTGGGCATGCTCGACGAGGAGCAGAAGAAGGATCCCGAGG TGGGCAAGACCATCCGCGCCCTGTTCATCATCAGTCCGGACCATAAGGTG CGCCTCTCCATGTTCTACCCCATGTCCACTGGTCGCAACGTTGACGAGAT TCTGAGGACCATTGACTCCCTCCAGCTGACTGATCGCCTCAAGGTGGTGG CCACTCCCGCCAACTGGACCCCTGGCACTAAGGTCATGATCCTGCCCACT GTCACCGATGAAGAGGCTCATAAACTCTTCCCCAAGGGATTTGATAAGGT ATCCATGCCGTCTGGAGTAAACTACGTCCGCACCACTGACAACTACTGAC ACAAAACCGTTCCCCATTTGTGATCCATTCAATAATGTGCCGTATTTCCT GACATATACTATATACTATGTGCAGTTCATTTATTTAATAAAAAATTATT TTAACAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prx2540-2-RA | 968 | Prx2540-2-RA | 103..960 | 2..859 | 4290 | 100 | Plus |
Prx2540-1.a | 905 | Prx2540-1.a | 3..701 | 2..700 | 3495 | 100 | Plus |
Prx2540-1-RA | 854 | Prx2540-1-RA | 73..755 | 63..745 | 3265 | 98.5 | Plus |
Prx2540-1.a | 905 | Prx2540-1.a | 696..812 | 629..745 | 540 | 97.4 | Plus |
Prx2540-1-RA | 854 | Prx2540-1-RA | 3..56 | 2..55 | 225 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 6306410..6306784 | 170..544 | 1875 | 100 | Plus |
chr2R | 21145070 | chr2R | 6312137..6312511 | 170..544 | 1800 | 98.7 | Plus |
chr2R | 21145070 | chr2R | 6314796..6315170 | 544..170 | 1800 | 98.7 | Minus |
chr2R | 21145070 | chr2R | 6306987..6307221 | 621..855 | 1175 | 100 | Plus |
chr2R | 21145070 | chr2R | 6306179..6306347 | 2..169 | 795 | 99.4 | Plus |
chr2R | 21145070 | chr2R | 6311898..6312074 | 2..169 | 620 | 92.7 | Plus |
chr2R | 21145070 | chr2R | 6315233..6315409 | 169..2 | 620 | 92.7 | Minus |
chr2R | 21145070 | chr2R | 6312714..6312838 | 621..745 | 580 | 97.6 | Plus |
chr2R | 21145070 | chr2R | 6314469..6314593 | 745..621 | 535 | 95.2 | Minus |
chr2R | 21145070 | chr2R | 6306848..6306923 | 545..620 | 380 | 100 | Plus |
chr2R | 21145070 | chr2R | 6312575..6312650 | 545..620 | 365 | 98.7 | Plus |
chr2R | 21145070 | chr2R | 6314657..6314732 | 620..545 | 365 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 10418950..10419324 | 170..544 | 1875 | 100 | Plus |
2R | 25286936 | 2R | 10424677..10425051 | 170..544 | 1800 | 98.7 | Plus |
2R | 25286936 | 2R | 10427300..10427674 | 544..170 | 1800 | 98.7 | Minus |
2R | 25286936 | 2R | 10419527..10419765 | 621..859 | 1195 | 100 | Plus |
2R | 25286936 | 2R | 10418720..10418887 | 2..169 | 840 | 100 | Plus |
2R | 25286936 | 2R | 10424438..10424614 | 2..169 | 620 | 92.7 | Plus |
2R | 25286936 | 2R | 10427737..10427913 | 169..2 | 620 | 92.7 | Minus |
2R | 25286936 | 2R | 10425254..10425378 | 621..745 | 580 | 97.6 | Plus |
2R | 25286936 | 2R | 10426973..10427097 | 745..621 | 535 | 95.2 | Minus |
2R | 25286936 | 2R | 10419388..10419463 | 545..620 | 380 | 100 | Plus |
2R | 25286936 | 2R | 10425115..10425190 | 545..620 | 365 | 98.7 | Plus |
2R | 25286936 | 2R | 10427161..10427236 | 620..545 | 365 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 10420149..10420523 | 170..544 | 1875 | 100 | Plus |
2R | 25260384 | 2R | 10425876..10426250 | 170..544 | 1800 | 98.6 | Plus |
2R | 25260384 | 2R | 10428499..10428873 | 544..170 | 1800 | 98.6 | Minus |
2R | 25260384 | 2R | 10420726..10420964 | 621..859 | 1195 | 100 | Plus |
2R | 25260384 | 2R | 10419919..10420086 | 2..169 | 840 | 100 | Plus |
2R | 25260384 | 2R | 10426453..10426577 | 621..745 | 580 | 97.6 | Plus |
2R | 25260384 | 2R | 10428172..10428296 | 745..621 | 535 | 95.2 | Minus |
2R | 25260384 | 2R | 10425707..10425813 | 63..169 | 520 | 99 | Plus |
2R | 25260384 | 2R | 10428936..10429042 | 169..63 | 520 | 99 | Minus |
2R | 25260384 | 2R | 10420587..10420662 | 545..620 | 380 | 100 | Plus |
2R | 25260384 | 2R | 10426314..10426389 | 545..620 | 365 | 98.6 | Plus |
2R | 25260384 | 2R | 10428360..10428435 | 620..545 | 365 | 98.6 | Minus |
2R | 25260384 | 2R | 10425637..10425690 | 2..55 | 225 | 94.4 | Plus |
2R | 25260384 | 2R | 10429059..10429112 | 55..2 | 225 | 94.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 6306177..6306347 | 1..169 | 98 | -> | Plus |
chr2R | 6306410..6306784 | 170..544 | 100 | -> | Plus |
chr2R | 6306848..6306923 | 545..620 | 100 | -> | Plus |
chr2R | 6306987..6307190 | 621..824 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx2540-2-RA | 1..663 | 87..749 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx2540-2-RA | 1..663 | 87..749 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx2540-2-RA | 1..663 | 87..749 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx2540-2-RA | 1..663 | 87..749 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx2540-2-RA | 1..663 | 87..749 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx2540-2-RA | 1..856 | 1..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx2540-2-RA | 1..854 | 2..855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx2540-2-RA | 1..856 | 1..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx2540-2-RA | 1..856 | 1..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx2540-2-RA | 1..856 | 1..855 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10419527..10419761 | 621..855 | 100 | Plus | |
2R | 10418718..10418887 | 1..169 | 99 | -> | Plus |
2R | 10418950..10419324 | 170..544 | 100 | -> | Plus |
2R | 10419388..10419463 | 545..620 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10419527..10419761 | 621..855 | 100 | Plus | |
2R | 10418718..10418887 | 1..169 | 99 | -> | Plus |
2R | 10418950..10419324 | 170..544 | 100 | -> | Plus |
2R | 10419388..10419463 | 545..620 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10419527..10419761 | 621..855 | 100 | Plus | |
2R | 10418718..10418887 | 1..169 | 99 | -> | Plus |
2R | 10418950..10419324 | 170..544 | 100 | -> | Plus |
2R | 10419388..10419463 | 545..620 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 6306223..6306392 | 1..169 | 99 | -> | Plus |
arm_2R | 6306455..6306829 | 170..544 | 100 | -> | Plus |
arm_2R | 6306893..6306968 | 545..620 | 100 | -> | Plus |
arm_2R | 6307032..6307266 | 621..855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10420149..10420523 | 170..544 | 100 | -> | Plus |
2R | 10420587..10420662 | 545..620 | 100 | -> | Plus |
2R | 10420726..10420960 | 621..855 | 100 | Plus | |
2R | 10419917..10420086 | 1..169 | 99 | -> | Plus |
Translation from 86 to 748
> RH69586.pep MRLGQTVPNFEADTTKGPIKFHEWQGNSWVVLFSHPADFTPVCTTELGRI AVHQPEFAKRNTKCLAHSVDALNSHVDWVNDIKSYCLDIPGDFPYPIIAD PTRDLAVSLGMLDEEQKKDPEVGKTIRALFIISPDHKVRLSMFYPMSTGR NVDEILRTIDSLQLTDRLKVVATPANWTPGTKVMILPTVTDEEAHKLFPK GFDKVSMPSGVNYVRTTDNY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12122-PA | 220 | GF12122-PA | 1..220 | 1..220 | 1145 | 96.4 | Plus |
Dana\GF12795-PA | 220 | GF12795-PA | 1..220 | 1..220 | 1144 | 96.4 | Plus |
Dana\GF12124-PA | 220 | GF12124-PA | 1..220 | 1..220 | 1143 | 95.9 | Plus |
Dana\GF14910-PA | 222 | GF14910-PA | 6..219 | 1..217 | 583 | 52.5 | Plus |
Dana\GF19402-PA | 194 | GF19402-PA | 24..188 | 19..192 | 238 | 34.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25209-PA | 220 | GG25209-PA | 1..220 | 1..220 | 1175 | 99.1 | Plus |
Dere\GG24165-PA | 220 | GG24165-PA | 1..220 | 1..220 | 1171 | 98.6 | Plus |
Dere\GG24478-PA | 222 | GG24478-PA | 6..219 | 1..217 | 578 | 51.6 | Plus |
Dere\GG15885-PA | 196 | GG15885-PA | 4..193 | 1..196 | 248 | 34 | Plus |
Dere\GG17772-PA | 194 | GG17772-PA | 24..188 | 19..192 | 242 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20103-PA | 220 | GH20103-PA | 1..220 | 1..220 | 1103 | 91.8 | Plus |
Dgri\GH20104-PA | 220 | GH20104-PA | 1..220 | 1..220 | 1103 | 91.8 | Plus |
Dgri\GH21252-PA | 220 | GH21252-PA | 1..220 | 1..220 | 1096 | 91.8 | Plus |
Dgri\GH22477-PA | 184 | GH22477-PA | 1..184 | 1..220 | 861 | 75.9 | Plus |
Dgri\GH11051-PA | 225 | GH11051-PA | 6..219 | 1..217 | 572 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prx2540-2-PA | 220 | CG11765-PA | 1..220 | 1..220 | 1177 | 100 | Plus |
Prx2540-1-PA | 220 | CG12405-PA | 1..220 | 1..220 | 1170 | 99.1 | Plus |
CG12896-PA | 220 | CG12896-PA | 1..220 | 1..220 | 1163 | 98.2 | Plus |
Prx6005-PA | 222 | CG3083-PA | 6..219 | 1..217 | 571 | 51.2 | Plus |
Jafrac1-PE | 194 | CG1633-PE | 24..188 | 19..192 | 231 | 34.9 | Plus |
Jafrac1-PD | 194 | CG1633-PD | 24..188 | 19..192 | 231 | 34.9 | Plus |
Jafrac1-PC | 194 | CG1633-PC | 24..188 | 19..192 | 231 | 34.9 | Plus |
Jafrac1-PA | 194 | CG1633-PA | 24..188 | 19..192 | 231 | 34.9 | Plus |
Jafrac1-PB | 194 | CG1633-PB | 24..188 | 19..192 | 231 | 34.9 | Plus |
Prx3-PA | 234 | CG5826-PA | 40..232 | 1..200 | 230 | 33 | Plus |
CG6888-PA | 196 | CG6888-PA | 4..193 | 1..196 | 229 | 32 | Plus |
Jafrac2-PC | 242 | CG1274-PC | 81..240 | 29..200 | 191 | 32 | Plus |
Jafrac2-PB | 242 | CG1274-PB | 81..240 | 29..200 | 191 | 32 | Plus |
Jafrac2-PA | 242 | CG1274-PA | 81..240 | 29..200 | 191 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20198-PA | 220 | GI20198-PA | 1..220 | 1..220 | 1126 | 93.6 | Plus |
Dmoj\GI17568-PA | 224 | GI17568-PA | 6..219 | 1..217 | 581 | 52.1 | Plus |
Dmoj\GI16105-PA | 194 | GI16105-PA | 24..188 | 19..192 | 242 | 34.3 | Plus |
Dmoj\GI22813-PA | 233 | GI22813-PA | 39..231 | 1..200 | 237 | 33 | Plus |
Dmoj\GI16636-PA | 243 | GI16636-PA | 53..241 | 3..200 | 217 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11593-PA | 220 | GL11593-PA | 1..220 | 1..220 | 1149 | 96.8 | Plus |
Dper\GL26709-PA | 168 | GL26709-PA | 6..165 | 1..217 | 327 | 37.8 | Plus |
Dper\GL26916-PA | 194 | GL26916-PA | 24..188 | 19..192 | 246 | 34.9 | Plus |
Dper\GL13701-PA | 233 | GL13701-PA | 39..228 | 1..195 | 235 | 32.3 | Plus |
Dper\GL20930-PA | 194 | GL20930-PA | 33..179 | 29..184 | 208 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11614-PA | 220 | GA11614-PA | 1..220 | 1..220 | 1149 | 96.8 | Plus |
Dpse\GA15914-PA | 222 | GA15914-PA | 6..219 | 1..217 | 576 | 53 | Plus |
Dpse\GA14060-PA | 200 | GA14060-PA | 30..194 | 19..192 | 246 | 34.9 | Plus |
Dpse\GA19159-PA | 233 | GA19159-PA | 39..228 | 1..195 | 235 | 32.3 | Plus |
Dpse\GA28632-PA | 194 | GA28632-PA | 4..179 | 3..184 | 209 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21216-PA | 220 | GM21216-PA | 1..220 | 1..220 | 1171 | 99.1 | Plus |
Dsec\GM20524-PA | 220 | GM20524-PA | 1..220 | 1..220 | 1165 | 98.6 | Plus |
Dsec\GM21213-PA | 220 | GM21213-PA | 1..220 | 1..220 | 1164 | 98.6 | Plus |
Dsec\GM18185-PA | 222 | GM18185-PA | 6..219 | 1..217 | 563 | 50.2 | Plus |
Dsec\GM25516-PA | 196 | GM25516-PA | 4..193 | 1..196 | 245 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25985-PA | 220 | GD25985-PA | 1..220 | 1..220 | 1165 | 98.6 | Plus |
Dsim\GD25983-PA | 220 | GD25983-PA | 1..220 | 1..220 | 1164 | 98.6 | Plus |
Dsim\GD22792-PA | 222 | GD22792-PA | 6..219 | 1..217 | 572 | 50.7 | Plus |
Dsim\GD10738-PA | 75 | GD10738-PA | 1..75 | 146..220 | 387 | 98.7 | Plus |
Dsim\GD14531-PA | 196 | GD14531-PA | 4..193 | 1..196 | 245 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20147-PA | 220 | GJ20147-PA | 1..220 | 1..220 | 1147 | 95.9 | Plus |
Dvir\GJ17911-PA | 224 | GJ17911-PA | 6..219 | 1..217 | 572 | 51.6 | Plus |
Dvir\GJ15754-PA | 194 | GJ15754-PA | 3..188 | 2..192 | 251 | 32.7 | Plus |
Dvir\GJ22817-PA | 233 | GJ22817-PA | 39..231 | 1..200 | 244 | 34.5 | Plus |
Dvir\GJ11904-PA | 195 | GJ11904-PA | 24..190 | 18..195 | 201 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18009-PA | 220 | GK18009-PA | 1..220 | 1..220 | 1140 | 95.9 | Plus |
Dwil\GK17795-PA | 220 | GK17795-PA | 1..220 | 1..220 | 1117 | 94.5 | Plus |
Dwil\GK24747-PA | 222 | GK24747-PA | 5..219 | 1..217 | 562 | 51.8 | Plus |
Dwil\GK25196-PA | 213 | GK25196-PA | 22..207 | 2..192 | 244 | 32.7 | Plus |
Dwil\GK19651-PA | 196 | GK19651-PA | 4..193 | 1..196 | 229 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19359-PA | 220 | GE19359-PA | 1..220 | 1..220 | 1169 | 98.6 | Plus |
Dyak\GE14982-PA | 222 | GE14982-PA | 6..219 | 1..217 | 577 | 51.6 | Plus |
Dyak\GE21518-PA | 94 | GE21518-PA | 1..94 | 1..153 | 305 | 49.7 | Plus |
Dyak\GE22230-PA | 196 | GE22230-PA | 4..181 | 1..184 | 242 | 34 | Plus |
Dyak\Jafrac1-PA | 194 | GE17062-PA | 24..188 | 19..192 | 242 | 34.9 | Plus |
Translation from 86 to 748
> RH69586.hyp MRLGQTVPNFEADTTKGPIKFHEWQGNSWVVLFSHPADFTPVCTTELGRI AVHQPEFAKRNTKCLAHSVDALNSHVDWVNDIKSYCLDIPGDFPYPIIAD PTRDLAVSLGMLDEEQKKDPEVGKTIRALFIISPDHKVRLSMFYPMSTGR NVDEILRTIDSLQLTDRLKVVATPANWTPGTKVMILPTVTDEEAHKLFPK GFDKVSMPSGVNYVRTTDNY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prx2540-2-PA | 220 | CG11765-PA | 1..220 | 1..220 | 1177 | 100 | Plus |
Prx2540-1-PA | 220 | CG12405-PA | 1..220 | 1..220 | 1170 | 99.1 | Plus |
CG12896-PA | 220 | CG12896-PA | 1..220 | 1..220 | 1163 | 98.2 | Plus |
Prx6005-PA | 222 | CG3083-PA | 6..219 | 1..217 | 571 | 51.2 | Plus |
Jafrac1-PE | 194 | CG1633-PE | 24..188 | 19..192 | 231 | 34.9 | Plus |