BDGP Sequence Production Resources |
Search the DGRC for RH69884
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 698 |
Well: | 84 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG5281-RA |
Protein status: | RH69884.pep: gold |
Sequenced Size: | 1598 |
Gene | Date | Evidence |
---|---|---|
CG5281 | 2008-02-01 | Manual selection by Ken Wan |
CG5281 | 2008-04-29 | Picked prior to 5.5 |
CG5281 | 2008-12-18 | 5.12 accounting |
1598 bp assembled on 2008-10-27
GenBank Submission: BT050556.1
> RH69884.complete GATTCGCGAAAAGAATTAAAAATGTTTAATTAAACGCAGTCGGAGCGTGC AAACAATGAATAAAACTCAGTGAAACTGGCGGCGGGGAAACGATGTGCCA TTGAAAACGCAGAAAAGGCGGCAGCAGACAGTGACACAGCGCGTAAATAA GGAAGGCAATCGAAAGAAATCGATTTTTCAGGGCAGGATGCTGAAACTTT GAAGGAATCCAGAAACTGTAGAGAAGAAACCCCACAGAATGCCGGAAAAC CTCGAGCTTCAGCAGTTCCAGGAGGGCGCCCCGCCCCCAGATCCCGCCCC CCGTTGGCTGGAGCGCTTGCAGCGACGATTGGGCGCCGATTGTCCCTACT TGGGTATCCTGCTGGCCACGCTCTCCTCGCTCTTCTTCTCCCTGTGCTCG GTGATTGTGAAGGGACTGGTGGACGTGAACCCCATGGAGCTGGCCTCGTT TCGATTCGTCGGAGTCCTGTTGCCGGCACTGCCCATCCTGATATACACGC GACAGCCGGTGTTTCCGGAGGGCAAGAGGGTGATACTGCTGCTGCGCTGC TTCATGGGCACAACGGGTCTGATGCTCAGCTTCTATGCCTTCCGACACAT GCCCCTGGCCGATGCGAGTGTCATCATCTTCTCCACGCCCGTTTTCGTGG CCATATTTGCGCGTGCCTTCCTCAAGGAGCCGTGTACGCTGTTCAATGTC CTGACCATCAATATGACATTGCTCGGCGTGGTCCTCATCACGCGCCCACC CTTTGTGTTCGGTGACACGGCGGAGAGTGAGGATGTCGCTGGGAAGACGT ACGACATCTGGGGACCAGTGGCCGCCATATCATCCACACTCTTCGGAGCC AATGTGTACATCCTGCTGCGGGCGCTCAAAAACCTGCACTTCTCCGTCAT CATGACGAATTTCGGTACCATCGCTCTGGTCTACACACTGATCGTTTGCG CATCTATTGGAGCTGTGTGCTGGCCAAGCTGCGGACGGGATCGTTGGCTG GTCGTTGTACTGGGCGTATTCAGCTTCCTGGGCCAGATCCTGCTCACGCT ATCGCTGCAGATCGAACAGGCCGGACCAGTGGCCATTGCTCGCTGCGCCG ACATCGTCTTCGCCTTCGTCTGGCAGATGCTCTTCTTCGGAGAGACGCCC ACCGCTTACTCGCTGGTGGGTGCGGTGATGGTGATGGGATCTGTGGTTCT GACGGCCCTGAAGAAATGGGCAGGCACCCTGCCACGCGAGTCGTCGCTGC GGAAGCGATTCAGGCTCATCCTGCTGGAATAGTGTGGTTCCAGAGCAACT AAAAGAGTTCGCGGTTTCTCCCTCGTCTTGTCACATCGTTCTCACCCAAT CCCGGCAAGCATCAGTGGCCGGCAGCAAACCCGGTTCATTCATCGTAGAC TCTACTTATATCAAGGCTCAGATCGTAGATTAATCAAAATATATAAGAAG GGACGCGTGATATCCACTCCACTCATAAGTAAATACTCGTAGTGCGTGTT TAGTTTAGCCAATTTCGCCGATTTGTTGTTTTGTACATTGTTATACATGC TTAAAATACGGTAATAAATACAACTTATGAATAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5281-RA | 1711 | CG5281-RA | 131..1711 | 2..1582 | 7905 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7261351..7261536 | 1..186 | 99 | -> | Plus |
chr3R | 7261598..7262993 | 187..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5281-RA | 1..1044 | 239..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5281-RA | 1..1044 | 239..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5281-RA | 1..1044 | 239..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5281-RA | 1..1044 | 239..1282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5281-RA | 11..1592 | 1..1582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5281-RA | 32..1613 | 1..1582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5281-RA | 32..1613 | 1..1582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5281-RA | 11..1592 | 1..1582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5281-RA | 32..1613 | 1..1582 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11435881..11436066 | 1..186 | 99 | -> | Plus |
3R | 11436128..11437523 | 187..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11435881..11436066 | 1..186 | 99 | -> | Plus |
3R | 11436128..11437523 | 187..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11435881..11436066 | 1..186 | 99 | -> | Plus |
3R | 11436128..11437523 | 187..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7261603..7261788 | 1..186 | 99 | -> | Plus |
arm_3R | 7261850..7263245 | 187..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11176959..11178354 | 187..1582 | 100 | Plus | |
3R | 11176712..11176897 | 1..186 | 99 | -> | Plus |
Translation from 238 to 1281
> RH69884.hyp MPENLELQQFQEGAPPPDPAPRWLERLQRRLGADCPYLGILLATLSSLFF SLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQPVFPEGKRVIL LLRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCT LFNVLTINMTLLGVVLITRPPFVFGDTAESEDVAGKTYDIWGPVAAISST LFGANVYILLRALKNLHFSVIMTNFGTIALVYTLIVCASIGAVCWPSCGR DRWLVVVLGVFSFLGQILLTLSLQIEQAGPVAIARCADIVFAFVWQMLFF GETPTAYSLVGAVMVMGSVVLTALKKWAGTLPRESSLRKRFRLILLE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5281-PA | 347 | CG5281-PA | 1..347 | 1..347 | 1774 | 100 | Plus |
Translation from 238 to 1281
> RH69884.pep MPENLELQQFQEGAPPPDPAPRWLERLQRRLGADCPYLGILLATLSSLFF SLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQPVFPEGKRVIL LLRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCT LFNVLTINMTLLGVVLITRPPFVFGDTAESEDVAGKTYDIWGPVAAISST LFGANVYILLRALKNLHFSVIMTNFGTIALVYTLIVCASIGAVCWPSCGR DRWLVVVLGVFSFLGQILLTLSLQIEQAGPVAIARCADIVFAFVWQMLFF GETPTAYSLVGAVMVMGSVVLTALKKWAGTLPRESSLRKRFRLILLE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18371-PA | 348 | GF18371-PA | 1..337 | 1..336 | 1601 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18167-PA | 347 | GG18167-PA | 1..347 | 1..347 | 1771 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17324-PA | 348 | GH17324-PA | 1..333 | 1..332 | 1487 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5281-PA | 347 | CG5281-PA | 1..347 | 1..347 | 1774 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10287-PA | 348 | GI10287-PA | 1..348 | 1..347 | 1543 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12375-PA | 329 | GL12375-PA | 1..318 | 1..336 | 1348 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18783-PA | 347 | GA18783-PA | 1..336 | 1..336 | 1494 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23946-PA | 347 | GM23946-PA | 1..347 | 1..347 | 1791 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18756-PA | 347 | GD18756-PA | 1..347 | 1..347 | 1795 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11095-PA | 349 | GJ11095-PA | 1..349 | 1..347 | 1559 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11296-PA | 350 | GK11296-PA | 1..350 | 1..347 | 1570 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26098-PA | 347 | GE26098-PA | 1..347 | 1..347 | 1768 | 98 | Plus |