BDGP Sequence Production Resources |
Search the DGRC for RH70969
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 709 |
Well: | 69 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Vago-RC |
Protein status: | RH70969.pep: wuzgold |
Preliminary Size: | 712 |
Sequenced Size: | 790 |
Gene | Date | Evidence |
---|---|---|
CG2081 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2081 | 2002-04-26 | Blastp of sequenced clone |
CG2081 | 2003-01-01 | Sim4 clustering to Release 3 |
Vago | 2008-04-29 | Release 5.5 accounting |
Vago | 2008-08-15 | Release 5.9 accounting |
Vago | 2008-12-18 | 5.12 accounting |
790 bp (790 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113627
> RH70969.complete CAGAGTTGTGCGCTAAACTTTGCAAACGTCGGGCCAAATTCTGTCCGCCG ATCTCAGTTCTTTCGAATAGCAAATTTTCACAAATGGAGTCAATTAGCAG CATGATTTATTTAGTGGCCATGATGTCATTGATCATCGGTGGCAGCCAAG CGATTCCTTATCGACCCTCGGCGTATCTGTACAATCAGCAGTACTGTATG GATACATTGACGGGTCGGCAGCTTTATATCGGTGAAGTCTTCACGCGAGA GGATCAGTGCGTCCGCATCCAATGCCTGGAAACGCTGCAACTCTGGGAGG ATAGGTAAGCGTGCCGTACTAGTATGCCATAGCATCGGGTAACAGATCAT CGTACTCATCCATGGTCCAGCTGCCAGGTGCCGAAACTGACGCAGGGCAA TTGCACGCCAGTTCCATCGACGAACCCGCATGCCGAATATCCCCGATGCT GCCCACTGTATGAGTGCAAGAGCTACGAGTCGAATTCGGGGGGAACTCTG GAGCAGACCAACATATATGACCACTATGGTACTCTGCGATCATCCCATCT CACTGAGATGATAGTGATCGACGGGCGGACACCCCCTCGTGGCGAGATTC ACACGGCGTCGGCGAGGAAGTATCAGGTGTGAGAAGTGAACTGGTACTCT GTTCCTAGGACTACTTAGTCTTTAGTGCAGATCTAATGTGTACAAATACA AATGGAGTTTATTGCGGAATACTTGAATATGTTAAATAAATTTAAATTTC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10980541..10980703 | 1..165 | 98 | -> | Plus |
chrX | 10980772..10981356 | 166..750 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vago-RB | 1..219 | 84..302 | 100 | == | Plus |
Vago-RB | 220..483 | 369..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vago-RB | 1..219 | 84..302 | 100 | == | Plus |
Vago-RB | 220..483 | 369..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vago-RB | 1..219 | 84..302 | 100 | == | Plus |
Vago-RB | 220..483 | 369..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vago-RB | 1..219 | 84..302 | 100 | == | Plus |
Vago-RB | 220..483 | 369..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vago-RB | 1..219 | 84..302 | 100 | == | Plus |
Vago-RB | 220..483 | 369..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vago-RC | 2..748 | 4..750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vago-RC | 2..748 | 4..750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vago-RB | 2..300 | 4..302 | 100 | == | Plus |
Vago-RB | 301..682 | 369..750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vago-RC | 2..748 | 4..750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vago-RB | 2..300 | 4..302 | 100 | == | Plus |
Vago-RB | 301..682 | 369..750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11089290..11089452 | 1..165 | 98 | -> | Plus |
X | 11089521..11090105 | 166..750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11089290..11089452 | 1..165 | 98 | -> | Plus |
X | 11089521..11090105 | 166..750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11089290..11089452 | 1..165 | 98 | -> | Plus |
X | 11089521..11090105 | 166..750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10983323..10983485 | 1..165 | 98 | -> | Plus |
arm_X | 10983554..10984138 | 166..750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11097619..11098203 | 166..750 | 100 | Plus | |
X | 11097388..11097550 | 1..165 | 98 | -> | Plus |
Translation from 0 to 307
> RH70969.hyp QLCAKLCKRRAKFCPPISVLSNSKFSQMESISSMIYLVAMMSLIIGGSQA IPYRPSAYLYNQQYCMDTLTGRQLYIGEVFTREDQCVRIQCLETLQLWED R*
Translation from 2 to 307
> RH70969.pep ELCAKLCKRRAKFCPPISVLSNSKFSQMESISSMIYLVAMMSLIIGGSQA IPYRPSAYLYNQQYCMDTLTGRQLYIGEVFTREDQCVRIQCLETLQLWED R*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20289-PA | 165 | GF20289-PA | 1..73 | 28..100 | 228 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18386-PA | 158 | GG18386-PA | 1..71 | 28..100 | 307 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17919-PA | 164 | GH17919-PA | 1..76 | 28..101 | 206 | 51.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vago-PD | 160 | CG2081-PD | 1..73 | 28..100 | 381 | 100 | Plus |
Vago-PB | 160 | CG2081-PB | 1..73 | 28..100 | 381 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16062-PA | 141 | GI16062-PA | 1..50 | 51..100 | 205 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18255-PA | 162 | GL18255-PA | 5..74 | 30..100 | 246 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15228-PA | 162 | GA15228-PA | 5..74 | 30..100 | 246 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11452-PA | 160 | GM11452-PA | 1..73 | 28..100 | 346 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17004-PA | 160 | GD17004-PA | 1..73 | 28..100 | 349 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15634-PA | 148 | GJ15634-PA | 23..60 | 63..100 | 175 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15903-PA | 158 | GE15903-PA | 1..73 | 28..100 | 334 | 84.9 | Plus |