BDGP Sequence Production Resources |
Search the DGRC for RH73327
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 733 |
Well: | 27 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG1598-RA |
Protein status: | RH73327.pep: gold |
Preliminary Size: | 1225 |
Sequenced Size: | 1275 |
Gene | Date | Evidence |
---|---|---|
CG1598 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1598 | 2002-04-26 | Blastp of sequenced clone |
CG1600 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1598 | 2008-04-29 | Release 5.5 accounting |
CG1598 | 2008-08-15 | Release 5.9 accounting |
CG1598 | 2008-12-18 | 5.12 accounting |
1275 bp (1275 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113636
> RH73327.complete ATTGATACTAAAAACGGTCACTCTGCACGCCAGAAGTCATATTCATTGCT TATAAGCAATTATTAATTTCAACTAATTTCATACGTGTCTCGCTTTAGTG GGCATTATGGCCGACAATTTGGAGCCCCTGGAGCCCAGCCTGCAGAATCT CGTCGAGCAGGACTCCCTCAAGTGGATCTTCGTGGGCGGAAAAGGCGGCG TGGGCAAGACGACTTGCAGTTCTAGCCTAGCCGTTCAGCTGTCGAAAGTG CGCGAATCCGTGCTAATCATATCCACAGATCCGGCGCACAACATATCGGA TGCATTCGATCAGAAGTTCACCAAGGTGCCGACAAAGGTAAATGGCTTTG ACAACCTGTTCGCCATGGAAATCGATCCAAATGCCGGTCTCAACGAGCTG CCCGAGGAGTACTTCGATGGCGAAAATGAGGCGCTGCGCGTGAGCAAGGG CGTCATGCAGGAGATGATCAACGCCCTGCCCGGCATCGACGAGGCGATGA GCTATGCAGAGGTTATGAAGCTGGTCAAGGGCATGAACTTCTCGGTAGTC GTCTTCGACACGGCGCCCACGGGACACACGCTGCGTCTGATTGCATTTCC CCAGGTGGTGGAGAAGGGGCTGGGCAAGCTGCTGCGGCTCAAGATGAAGG TGGCGCCCCTGCTGTCACAGTTCGTCTCCATGCTGGGCATGGCTGATGTG AACGCTGACACACTCTCCCAGAAGCTGGACGACATGCTGCGCGTTATCAC CCAGGTCAACGAGCAGTTCAAGAACCCAGATCAAACTACATTCGTCTGCG TGTGCATAGCAGAGTTCTTCTCGCTGTACGAGACGGAACGACTTGTGCAA GAGCTAACCAAGTGCGGCATCGACGTCCACAACATCATTGTAAACCAACT GCTGTTTCTGCAGAACTCGCACGACTCGTGCAGCATGTGCGCCTCCCGCT TCAAGATTCAGGAGAAGTACCTGGACCAGATTGCCGACCTGTATGAAGAC TTCCACGTAACCAAGTTGCCGCTCCTCGAGAAAGAGGTGCGCGGTCCAGA GAGCATCCGTTCTTTCTCCGAGAACCTTATGAAGCCCTACAACCCCAAGG GCGAGCCCAAGGAATAGGATAGCCCGTCCAACCCTTTACCCATCCGTTTG TAAGTTTCTTCCTTAGTTTGTGTGAACAGAAAGTGCGTAAAATAAATTAA AGTTGAGGCAGCGATCCCCGAAGGGATCTGCTTCGACGTGTAATGCGTAG ACAACGCTTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3425581..3426061 | 1259..779 | 2405 | 100 | Minus |
chr2R | 21145070 | chr2R | 3426120..3426563 | 779..336 | 2205 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 3426827..3427041 | 219..5 | 1075 | 100 | Minus |
chr2R | 21145070 | chr2R | 3426644..3426765 | 339..218 | 610 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7538230..7538712 | 1261..779 | 2415 | 100 | Minus |
2R | 25286936 | 2R | 7538771..7539214 | 779..336 | 2220 | 100 | Minus |
2R | 25286936 | 2R | 7539478..7539692 | 219..5 | 1075 | 100 | Minus |
2R | 25286936 | 2R | 7539295..7539416 | 339..218 | 610 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7539429..7539911 | 1261..779 | 2415 | 100 | Minus |
2R | 25260384 | 2R | 7539970..7540413 | 779..336 | 2220 | 100 | Minus |
2R | 25260384 | 2R | 7540677..7540891 | 219..5 | 1075 | 100 | Minus |
2R | 25260384 | 2R | 7540494..7540615 | 339..218 | 610 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 1648..1732 | 27..116 | 114 | 62.2 | Plus |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 10166..10250 | 27..116 | 114 | 62.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3426827..3427045 | 1..219 | 99 | Minus | |
chr2R | 3425581..3426061 | 779..1259 | 100 | <- | Minus |
chr2R | 3426121..3426561 | 338..778 | 99 | <- | Minus |
chr2R | 3426646..3426763 | 220..337 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1598-RA | 1..1011 | 107..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1598-RA | 1..1011 | 107..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1598-RA | 1..1011 | 107..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1598-RA | 1..1011 | 107..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1598-RA | 1..1011 | 107..1117 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1598-RA | 2..1259 | 3..1259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1598-RA | 2..1259 | 3..1259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1598-RA | 2..1259 | 3..1259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1598-RA | 2..1259 | 3..1259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1598-RA | 2..1259 | 3..1259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7538232..7538712 | 779..1259 | 100 | <- | Minus |
2R | 7538772..7539212 | 338..778 | 100 | <- | Minus |
2R | 7539297..7539414 | 220..337 | 100 | <- | Minus |
2R | 7539478..7539696 | 1..219 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7538232..7538712 | 779..1259 | 100 | <- | Minus |
2R | 7538772..7539212 | 338..778 | 100 | <- | Minus |
2R | 7539297..7539414 | 220..337 | 100 | <- | Minus |
2R | 7539478..7539696 | 1..219 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7538232..7538712 | 779..1259 | 100 | <- | Minus |
2R | 7538772..7539212 | 338..778 | 100 | <- | Minus |
2R | 7539297..7539414 | 220..337 | 100 | <- | Minus |
2R | 7539478..7539696 | 1..219 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3426983..3427201 | 1..219 | 99 | Minus | |
arm_2R | 3425737..3426217 | 779..1259 | 100 | <- | Minus |
arm_2R | 3426277..3426717 | 338..778 | 100 | <- | Minus |
arm_2R | 3426802..3426919 | 220..337 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7539431..7539911 | 779..1259 | 100 | <- | Minus |
2R | 7539971..7540411 | 338..778 | 100 | <- | Minus |
2R | 7540496..7540613 | 220..337 | 100 | <- | Minus |
2R | 7540677..7540895 | 1..219 | 99 | Minus |
Translation from 106 to 1116
> RH73327.pep MADNLEPLEPSLQNLVEQDSLKWIFVGGKGGVGKTTCSSSLAVQLSKVRE SVLIISTDPAHNISDAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPE EYFDGENEALRVSKGVMQEMINALPGIDEAMSYAEVMKLVKGMNFSVVVF DTAPTGHTLRLIAFPQVVEKGLGKLLRLKMKVAPLLSQFVSMLGMADVNA DTLSQKLDDMLRVITQVNEQFKNPDQTTFVCVCIAEFFSLYETERLVQEL TKCGIDVHNIIVNQLLFLQNSHDSCSMCASRFKIQEKYLDQIADLYEDFH VTKLPLLEKEVRGPESIRSFSENLMKPYNPKGEPKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11712-PA | 336 | GF11712-PA | 1..336 | 1..336 | 1748 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10733-PA | 336 | GG10733-PA | 1..336 | 1..336 | 1762 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21552-PA | 336 | GH21552-PA | 1..331 | 1..331 | 1621 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1598-PA | 336 | CG1598-PA | 1..336 | 1..336 | 1719 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19524-PA | 332 | GI19524-PA | 1..331 | 1..331 | 1693 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20106-PA | 336 | GL20106-PA | 1..336 | 1..336 | 1626 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14038-PA | 336 | GA14038-PA | 1..336 | 1..336 | 1628 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20779-PA | 335 | GM20779-PA | 1..335 | 1..336 | 1612 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10240-PA | 336 | GD10240-PA | 1..336 | 1..336 | 1772 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21093-PA | 336 | GJ21093-PA | 1..331 | 1..331 | 1615 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17805-PA | 335 | GK17805-PA | 6..328 | 5..330 | 1512 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23838-PA | 336 | GE23838-PA | 1..336 | 1..336 | 1761 | 98.2 | Plus |
Translation from 106 to 1116
> RH73327.hyp MADNLEPLEPSLQNLVEQDSLKWIFVGGKGGVGKTTCSSSLAVQLSKVRE SVLIISTDPAHNISDAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPE EYFDGENEALRVSKGVMQEMINALPGIDEAMSYAEVMKLVKGMNFSVVVF DTAPTGHTLRLIAFPQVVEKGLGKLLRLKMKVAPLLSQFVSMLGMADVNA DTLSQKLDDMLRVITQVNEQFKNPDQTTFVCVCIAEFFSLYETERLVQEL TKCGIDVHNIIVNQLLFLQNSHDSCSMCASRFKIQEKYLDQIADLYEDFH VTKLPLLEKEVRGPESIRSFSENLMKPYNPKGEPKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1598-PA | 336 | CG1598-PA | 1..336 | 1..336 | 1719 | 100 | Plus |