Clone RH73613 Report

Search the DGRC for RH73613

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:736
Well:13
Vector:pFlc-1
Associated Gene/TranscriptCG12484-RA
Protein status:RH73613.pep: gold
Sequenced Size:3128

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12484 2002-01-01 Sim4 clustering to Release 2
CG33041 2002-04-26 Blastp of sequenced clone
CG33041 2003-01-01 Sim4 clustering to Release 3
CG12484 2008-04-29 Release 5.5 accounting
CG12484 2008-08-15 Release 5.9 accounting
CG12484 2008-12-18 5.12 accounting

Clone Sequence Records

RH73613.complete Sequence

3128 bp (3128 high quality bases) assembled on 2002-04-26

GenBank Submission: AY113638

> RH73613.complete
ATCAGTGAGAGTTTGCGATCCCGCGGGTACGGTCGGAACTAACGGGACTT
GAACGGCGTGTCGCGAGCAGAGTGCGAATGGAATTGCATTCCGGCCATTG
GAGCAAAATCAAACCGAAACGTGCATCCAAAAATCAACGCCTGATTTCCA
TCAGTATCCCAGCAACGGGCATATGTGTTCAAAGTAGATAGTGTGTCGCA
AGCGAAGCCCATAAGTACAATGTGCTTATCCTAGAAGCTGGATAAGGTCA
AACTGAAAAGTGTGGAAAGTGTGTTTAAAGTCGCGGTCCATCGAGCTACA
AACAACGGTACTTGTTCGCAATCGTTTGCGAATTAATTTAAATCGAAATC
AAGCAAAAATAAATCGCGCAAAAGAACTACATACGAAAAATGCTCGCGCT
GCAAAGTGTGAAAGGCATCTGAGCCGAAAAGTAGGCAACACGGGTGCAGG
AGCACCAGGACACCCCGCATTGAAGGCTACCCAGAAACCCCCTCGTCTTC
GTCCTCCCCTCACCACACTCACTGTCCGCAGGATCGCGGGCTGGGTCGCC
ACCATGAGCAGGACCTCCAGCCGCTCGCTCTTCCTGCCGCTCTGCCTGCT
CGTCCTGTCCGCGCTAAATGGCCCAGCGGCGGCGGCATCTCGCGTCCGCG
TCAGCTCCTCGACCACCATGACCAGGAACATCGAGGAGGAGAATGCCCTA
CTTTTACTTTTAGCTGGACCTCCCGTGCTATCTGAGTCCATAATGGGTAC
GGTCGGCCGGCTGCCCTGCAACGTCACCCCGCCCATTTACGAGGATCGAG
TGGCGCTGGTTATCTGGTACAAAGTTGGCCTGAAGACTCCCATTTACAGT
GTGGACACACGCGACTCGAACTTCGCCCAGGGAACGCACTGGTCGGATGA
GACCTACCGGGAGCGGCTCTCCTTCCACGTGGAAGGACGTGCTGGCACGC
TGACCATCAAGTCAACCACGGAGGACGACACGGGCGAGTATCGCTGCCGC
GTCGACTTCCAGAAGAGTCCGACTCGCAACTCCAAAGTGAATTTAACTGT
CATAATTCCGCCCGAGTCGGTGATTATATTGGACAGCAAGGGTGTGACCA
TCGAGGATCACACGCTGGGTCCTTACAACGAGGGCTCTGGGATAAACATC
ACGTGCGTGGCCATCGGCGGCCGCCCGCAGCCGAGGGTTACCTGGCTGCA
TGGAAACACCGTCTACAAGAATGCCAGTGTGGGCCAACCCCTGTCCGAGC
GACGGGTGGGCAATACCCTGTCCTTGGCTCGACTGGAGCGCAGGAATCTT
CACATGCAGCTAACGTGCCGGGCGGAGAACAATAATTTGACAACGCCAAT
TATCAGCAGCGTCGTCCTCGACATGAACCTGCGTCCTTTGATTGTGAAGC
TGCAGGGGGAGAATCGAGCTCTGTCGGCGGGGAATTCTTATCAGCTCAGT
TGCGTTGTCATCGGAGCACGTCCAGCGCCGACGATTACCTGGTGGAAGGG
CAGTACCCCCATGAAGAATACTCACGAGATTGCTACACCGGACGGTAATC
TGACTACCTCGGTGCTGACATTCACGCCCACCATCGATGACCGCGGCAAG
TTCCTCTCGTGTCGCGCGGAGCAGAGCATGATACCCGAGTCCGGAATGGA
GGACGGCTGGAAATTGGACATATATCACATACCGGTGGTGAGCCTGGAGC
TGGGAACCAATTCGCTTAACTCAACTCTGCGCGAGGGAATCGATGTCTTC
TTCGAGTGCAACATCAAATCGAATCCCTGGATATACGAAGTTAGCTGGCG
GCACAATGGTAAGATTCTAACCAACAATCCAGCCGAAGGCATCGCCGTCT
CCAACCAGAGTCTGGTGCTTCAAAATGCCAGCCGGGCGAGAAGTGGCATC
TACACCTGTGTGGGCAGTAATCGGGAGGGCGACGGCGAGAGCAATCCCGT
TCAGCTGGACATACGATTTGCTCCTGTTTGCCGACCTCGCCAGCGTCTCT
CCTATAGCTCGGGCAGGCATGAGACTGTCAAGGTGGCCTGCGAAATTGAT
GCCAATCCCGCGGAGGCCACCTACGTTTGGAAATTCAATGCAACCCAGGG
CGAAACAGTTGACATACCGGCTTCGCAAGTGGCCGTGGATCGGGGCCGAA
GTATAGCCCATTACACGCCCATGACGGAGAATGACTACGGTACGCTGCTC
TGCTGGGCCACCAACGAAATTGGCGATCAAAGTGAACCCTGCGTATACAC
AATATTCCCAGCGGGCGAGCCGGATCCGTTGCTAAACTGCACGGTGCTCA
ACCAGACATCGACGGGCTTCCAAATCGAATGCATCGAGGGCTTCAATGGC
GGCCTGCAGCAGGACTTTATAATGGAGGTTTACATGAACGGAACGACACG
ACATCCCAAAATTTCAAAATCAAAGCGACCGTACTTTGAGGTAAGCGGAC
TGGTGCCCGGAATGGGCTACAATGTCTTCCTCATTGCCAACAACAGCAAG
GGCCGTAGCAATGCCACCATTTTGCAGGTCTACACGCTGAAGGATCCGGA
GAAGCAGACGGTTAAAATAACATTCACTAAGTCCTTCCAAGGACTTAGGC
CTGCCTATACCAAAACAAAAGCGACAGCGACCACGACCAGCGACTGCGTT
TGCGATGAGGATGAGTTCCTAAATCTGGGCAAGGGAATTAGCCACGACGA
GGGCACAGACGCTGACCAGCAAGAAGGTAGCGGTGGACTATCCTTTTCTA
TAATTTTCTATTAACTATGCTTTTTATTGTTTAACTTGTAGTACTGCCTT
GTTTGCTTATTATTATTTGCTTTAATATTAATTCAATGTTATTATTTAAA
TATGAATTTTAATTTGATTTATGATTTGTTGTTGTACGAGTATGTAGCTT
TAGTTGTTATTCATGTGTTTAATATTAAATATTTATTTGTGTTTGTTTCC
CTTAGCCGTTTTGTAATAATATGTTAGTTTTATATTTGCTGTAATTAATT
TCCACTTAAACATTTTTTGGTTTATAGCACCATTAATTCACTTTAACAAC
TTCACCCCACCAAGTCTGCAAAAAAAAAGCTGCACAAATAAATCCGGATG
CCAAATGGTTTTAAAAAAAAAAAAAAAA

RH73613.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:10:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG12484-RA 3172 CG12484-RA 62..3172 2..3112 15540 99.9 Plus
CG12484-RC 3801 CG12484-RC 2..2726 2..2726 13610 99.9 Plus
CG12484-RB 5119 CG12484-RB 2..2726 2..2726 13610 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:47:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 16357248..16357805 2561..3112 2605 98.2 Plus
chr2R 21145070 chr2R 16316338..16316708 323..693 1840 99.7 Plus
chr2R 21145070 chr2R 16311266..16311586 2..322 1530 98.4 Plus
chr2R 21145070 chr2R 16351472..16351682 1169..1379 1055 100 Plus
chr2R 21145070 chr2R 16355044..16355259 1968..2183 1050 99.1 Plus
chr2R 21145070 chr2R 16348857..16349065 847..1055 1045 100 Plus
chr2R 21145070 chr2R 16354460..16354619 1808..1967 800 100 Plus
chr2R 21145070 chr2R 16356300..16356461 2264..2425 795 99.4 Plus
chr2R 21145070 chr2R 16351778..16351930 1380..1532 765 100 Plus
chr2R 21145070 chr2R 16352497..16352641 1532..1676 710 99.3 Plus
chr2R 21145070 chr2R 16356819..16356955 2425..2561 670 99.3 Plus
chr2R 21145070 chr2R 16353657..16353788 1677..1808 660 100 Plus
chr2R 21145070 chr2R 16346360..16346501 708..849 635 96.5 Plus
chr2R 21145070 chr2R 16350714..16350828 1056..1170 575 100 Plus
chr2R 21145070 chr2R 16355635..16355721 2183..2269 405 97.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:39:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:47:53
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20470413..20470965 2561..3113 2765 100 Plus
2R 25286936 2R 20429404..20429776 323..695 1865 100 Plus
2R 25286936 2R 20424336..20424656 2..322 1605 100 Plus
2R 25286936 2R 20468208..20468423 1968..2183 1080 100 Plus
2R 25286936 2R 20464618..20464828 1169..1379 1055 100 Plus
2R 25286936 2R 20462001..20462209 847..1055 1045 100 Plus
2R 25286936 2R 20469465..20469626 2264..2425 810 100 Plus
2R 25286936 2R 20467618..20467777 1808..1967 800 100 Plus
2R 25286936 2R 20464926..20465078 1380..1532 765 100 Plus
2R 25286936 2R 20465647..20465791 1532..1676 725 100 Plus
2R 25286936 2R 20469984..20470120 2425..2561 685 100 Plus
2R 25286936 2R 20459479..20459620 708..849 680 98.6 Plus
2R 25286936 2R 20466809..20466940 1677..1808 660 100 Plus
2R 25286936 2R 20463860..20463974 1056..1170 575 100 Plus
2R 25286936 2R 20468799..20468885 2183..2269 405 97.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:40:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 20471612..20472164 2561..3113 2765 100 Plus
2R 25260384 2R 20430603..20430975 323..695 1865 100 Plus
2R 25260384 2R 20425535..20425855 2..322 1605 100 Plus
2R 25260384 2R 20469407..20469622 1968..2183 1080 100 Plus
2R 25260384 2R 20465817..20466027 1169..1379 1055 100 Plus
2R 25260384 2R 20463200..20463408 847..1055 1045 100 Plus
2R 25260384 2R 20470664..20470825 2264..2425 810 100 Plus
2R 25260384 2R 20468817..20468976 1808..1967 800 100 Plus
2R 25260384 2R 20466125..20466277 1380..1532 765 100 Plus
2R 25260384 2R 20466846..20466990 1532..1676 725 100 Plus
2R 25260384 2R 20471183..20471319 2425..2561 685 100 Plus
2R 25260384 2R 20460678..20460819 708..849 680 98.5 Plus
2R 25260384 2R 20468008..20468139 1677..1808 660 100 Plus
2R 25260384 2R 20465059..20465173 1056..1170 575 100 Plus
2R 25260384 2R 20469998..20470084 2183..2269 405 97.7 Plus
Blast to na_te.dros performed 2019-03-15 16:47:53
Subject Length Description Subject Range Query Range Score Percent Strand
Juan 4236 Juan JUAN 4236bp 3989..4236 3077..2811 164 57.2 Minus
Dvir\Tv1 6868 Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). 4885..5159 3023..2745 149 56.3 Minus
mdg3 5519 mdg3 DMMDG3 5519bp Derived from X95908 (e990667) (Rel. 49, Last updated, Version 3). 4003..4119 3025..2916 128 59.8 Minus

RH73613.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:48:37 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 16354460..16354619 1808..1967 100 -> Plus
chr2R 16351778..16351929 1380..1531 100 -> Plus
chr2R 16311265..16311586 1..322 98 -> Plus
chr2R 16316338..16316710 323..695 99 -> Plus
chr2R 16318777..16318797 696..716 100 -> Plus
chr2R 16346369..16346501 717..849 97 -> Plus
chr2R 16348860..16349065 850..1055 100 -> Plus
chr2R 16350714..16350827 1056..1169 100 -> Plus
chr2R 16351473..16351682 1170..1379 100 -> Plus
chr2R 16352497..16352641 1532..1676 99 -> Plus
chr2R 16353657..16353787 1677..1807 100 -> Plus
chr2R 16355044..16355258 1968..2182 99 -> Plus
chr2R 16355635..16355716 2183..2264 98 -> Plus
chr2R 16356301..16356460 2265..2424 99 -> Plus
chr2R 16356819..16356955 2425..2561 99 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:49:26 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
CG12484-RA 1..2211 554..2764 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:54:18 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
CG12484-RA 1..2211 554..2764 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:10:34 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
CG12484-RA 1..2211 554..2764 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:46:46 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
CG12484-RA 1..2211 554..2764 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:50:25 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
CG12484-RA 1..2211 554..2764 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:49:23 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
CG12484-RA 2..3112 2..3112 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:54:18 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
CG12484-RA 2..3112 2..3112 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:10:34 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
CG12484-RA 1..3109 4..3112 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:46:46 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
CG12484-RA 2..3112 2..3112 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:50:25 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
CG12484-RA 1..3109 4..3112 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:37 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20469984..20470120 2425..2561 100 -> Plus
2R 20459488..20459620 717..849 100 -> Plus
2R 20462004..20462209 850..1055 100 -> Plus
2R 20466809..20466939 1677..1807 100 -> Plus
2R 20463860..20463973 1056..1169 100 -> Plus
2R 20467618..20467777 1808..1967 100 -> Plus
2R 20468208..20468422 1968..2182 100 -> Plus
2R 20468799..20468880 2183..2264 98 -> Plus
2R 20469466..20469625 2265..2424 100 -> Plus
2R 20424335..20424656 1..322 99 -> Plus
2R 20429404..20429776 323..695 100 -> Plus
2R 20431843..20431863 696..716 100 -> Plus
2R 20464619..20464828 1170..1379 100 -> Plus
2R 20464926..20465077 1380..1531 100 -> Plus
2R 20465647..20465791 1532..1676 100 -> Plus
2R 20470414..20470964 2562..3112 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:37 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20469984..20470120 2425..2561 100 -> Plus
2R 20459488..20459620 717..849 100 -> Plus
2R 20462004..20462209 850..1055 100 -> Plus
2R 20466809..20466939 1677..1807 100 -> Plus
2R 20463860..20463973 1056..1169 100 -> Plus
2R 20467618..20467777 1808..1967 100 -> Plus
2R 20468208..20468422 1968..2182 100 -> Plus
2R 20468799..20468880 2183..2264 98 -> Plus
2R 20469466..20469625 2265..2424 100 -> Plus
2R 20424335..20424656 1..322 99 -> Plus
2R 20429404..20429776 323..695 100 -> Plus
2R 20431843..20431863 696..716 100 -> Plus
2R 20464619..20464828 1170..1379 100 -> Plus
2R 20464926..20465077 1380..1531 100 -> Plus
2R 20465647..20465791 1532..1676 100 -> Plus
2R 20470414..20470964 2562..3112 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:37 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20469984..20470120 2425..2561 100 -> Plus
2R 20459488..20459620 717..849 100 -> Plus
2R 20462004..20462209 850..1055 100 -> Plus
2R 20466809..20466939 1677..1807 100 -> Plus
2R 20463860..20463973 1056..1169 100 -> Plus
2R 20467618..20467777 1808..1967 100 -> Plus
2R 20468208..20468422 1968..2182 100 -> Plus
2R 20468799..20468880 2183..2264 98 -> Plus
2R 20469466..20469625 2265..2424 100 -> Plus
2R 20424335..20424656 1..322 99 -> Plus
2R 20429404..20429776 323..695 100 -> Plus
2R 20431843..20431863 696..716 100 -> Plus
2R 20464619..20464828 1170..1379 100 -> Plus
2R 20464926..20465077 1380..1531 100 -> Plus
2R 20465647..20465791 1532..1676 100 -> Plus
2R 20470414..20470964 2562..3112 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:10:34 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16353152..16353296 1532..1676 100 -> Plus
arm_2R 16354314..16354444 1677..1807 100 -> Plus
arm_2R 16356971..16357130 2265..2424 100 -> Plus
arm_2R 16357489..16357625 2425..2561 100 -> Plus
arm_2R 16351365..16351478 1056..1169 100 -> Plus
arm_2R 16352124..16352333 1170..1379 100 -> Plus
arm_2R 16352431..16352582 1380..1531 100 -> Plus
arm_2R 16311840..16312161 1..322 99 -> Plus
arm_2R 16316909..16317281 323..695 100 -> Plus
arm_2R 16319348..16319368 696..716 100 -> Plus
arm_2R 16346993..16347125 717..849 100 -> Plus
arm_2R 16349509..16349714 850..1055 100 -> Plus
arm_2R 16355123..16355282 1808..1967 100 -> Plus
arm_2R 16355713..16355927 1968..2182 100 -> Plus
arm_2R 16356304..16356385 2183..2264 98 -> Plus
arm_2R 16357919..16358469 2562..3112 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:19:23 Download gff for RH73613.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20468008..20468138 1677..1807 100 -> Plus
2R 20468817..20468976 1808..1967 100 -> Plus
2R 20469407..20469621 1968..2182 100 -> Plus
2R 20469998..20470079 2183..2264 98 -> Plus
2R 20470665..20470824 2265..2424 100 -> Plus
2R 20471183..20471319 2425..2561 100 -> Plus
2R 20425534..20425855 1..322 99 -> Plus
2R 20430603..20430975 323..695 100 -> Plus
2R 20433042..20433062 696..716 100 -> Plus
2R 20460687..20460819 717..849 100 -> Plus
2R 20463203..20463408 850..1055 100 -> Plus
2R 20465059..20465172 1056..1169 100 -> Plus
2R 20465818..20466027 1170..1379 100 -> Plus
2R 20466125..20466276 1380..1531 100 -> Plus
2R 20466846..20466990 1532..1676 100 -> Plus
2R 20471613..20472163 2562..3112 100   Plus

RH73613.pep Sequence

Translation from 553 to 2763

> RH73613.pep
MSRTSSRSLFLPLCLLVLSALNGPAAAASRVRVSSSTTMTRNIEEENALL
LLLAGPPVLSESIMGTVGRLPCNVTPPIYEDRVALVIWYKVGLKTPIYSV
DTRDSNFAQGTHWSDETYRERLSFHVEGRAGTLTIKSTTEDDTGEYRCRV
DFQKSPTRNSKVNLTVIIPPESVIILDSKGVTIEDHTLGPYNEGSGINIT
CVAIGGRPQPRVTWLHGNTVYKNASVGQPLSERRVGNTLSLARLERRNLH
MQLTCRAENNNLTTPIISSVVLDMNLRPLIVKLQGENRALSAGNSYQLSC
VVIGARPAPTITWWKGSTPMKNTHEIATPDGNLTTSVLTFTPTIDDRGKF
LSCRAEQSMIPESGMEDGWKLDIYHIPVVSLELGTNSLNSTLREGIDVFF
ECNIKSNPWIYEVSWRHNGKILTNNPAEGIAVSNQSLVLQNASRARSGIY
TCVGSNREGDGESNPVQLDIRFAPVCRPRQRLSYSSGRHETVKVACEIDA
NPAEATYVWKFNATQGETVDIPASQVAVDRGRSIAHYTPMTENDYGTLLC
WATNEIGDQSEPCVYTIFPAGEPDPLLNCTVLNQTSTGFQIECIEGFNGG
LQQDFIMEVYMNGTTRHPKISKSKRPYFEVSGLVPGMGYNVFLIANNSKG
RSNATILQVYTLKDPEKQTVKITFTKSFQGLRPAYTKTKATATTTSDCVC
DEDEFLNLGKGISHDEGTDADQQEGSGGLSFSIIFY*

RH73613.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12266-PA 1198 GF12266-PA 15..721 19..724 3564 93.1 Plus
Dana\GF11518-PA 944 GF11518-PA 29..633 61..668 1239 42.1 Plus
Dana\GF17603-PA 1006 GF17603-PA 76..690 57..669 1202 40.2 Plus
Dana\GF15000-PA 890 GF15000-PA 67..673 61..662 1109 38.5 Plus
Dana\GF13311-PA 1063 GF13311-PA 1..445 98..524 748 35.6 Plus
Dana\GF13311-PA 1063 GF13311-PA 609..737 545..673 174 33.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22033-PA 1201 GG22033-PA 1..726 1..724 3850 98.5 Plus
Dere\GG17336-PA 939 GG17336-PA 29..633 61..668 1224 41.4 Plus
Dere\GG17847-PA 1090 GG17847-PA 38..646 63..676 1222 39.3 Plus
Dere\GG19699-PA 1003 GG19699-PA 64..689 45..669 1204 39.9 Plus
Dere\GG24233-PA 852 GG24233-PA 50..656 61..662 1096 38.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:35:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20836-PA 735 GH20836-PA 20..735 21..735 3296 84.2 Plus
Dgri\GH18044-PA 940 GH18044-PA 29..641 61..679 1224 41.3 Plus
Dgri\GH19047-PA 1025 GH19047-PA 74..688 57..669 1204 40.7 Plus
Dgri\GH14295-PA 1726 GH14295-PA 83..631 58..581 936 34.7 Plus
Dgri\GH23057-PA 1142 GH23057-PA 14..504 53..522 829 35.7 Plus
Dgri\GH23057-PA 1142 GH23057-PA 697..803 545..652 181 35.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
side-VIII-PA 736 CG12484-PA 1..736 1..736 3861 100 Plus
side-VIII-PB 1201 CG12484-PB 1..724 1..724 3800 100 Plus
side-VIII-PD 1194 CG12484-PD 1..717 1..724 3754 99 Plus
side-VIII-PE 1142 CG12484-PE 1..677 1..683 3470 97.1 Plus
side-VI-PC 760 CG34114-PC 38..646 63..676 1223 39.6 Plus
side-VI-PB 1087 CG34114-PB 38..646 63..676 1223 39.6 Plus
side-VII-PB 939 CG12950-PB 29..633 61..668 1212 41.6 Plus
side-VII-PA 939 CG12950-PA 29..633 61..668 1212 41.6 Plus
side-IV-PC 1001 CG14372-PC 75..689 57..669 1195 39.8 Plus
side-IV-PD 1001 CG14372-PD 75..689 57..669 1195 39.8 Plus
side-II-PB 1064 CG42313-PB 58..656 61..657 1074 38.2 Plus
side-II-PA 1064 CG15277-PA 58..656 61..657 1074 38.2 Plus
side-III-PP 1056 CG34113-PP 57..692 58..669 986 33.3 Plus
side-III-PO 1689 CG34113-PO 57..605 58..581 939 34.6 Plus
side-V-PA 1140 CG34371-PA 48..525 64..522 807 36 Plus
side-V-PB 1174 CG34371-PB 48..525 64..522 807 36 Plus
side-PB 929 CG31062-PB 96..733 56..657 739 29.6 Plus
side-PA 939 CG31062-PA 96..733 56..657 739 29.6 Plus
side-PD 943 CG31062-PD 96..733 56..657 739 29.6 Plus
side-PC 986 CG31062-PC 96..733 56..657 739 29.6 Plus
nrm-PB 1036 CG8779-PB 97..519 115..514 319 26.2 Plus
nrm-PA 1087 CG8779-PA 97..519 115..514 319 26.2 Plus
nrm-PF 1097 CG43079-PF 97..519 115..514 319 26.2 Plus
nrm-PH 1209 CG43079-PH 97..519 115..514 319 26.2 Plus
nrm-PI 1846 CG43079-PI 97..519 115..514 319 26.2 Plus
nrm-PE 2192 CG43079-PE 97..519 115..514 319 26.2 Plus
sns-PA 1479 CG33141-PA 539..1048 133..653 257 23.9 Plus
sns-PC 1492 CG33141-PC 539..1048 133..653 257 23.9 Plus
sns-PB 1542 CG33141-PB 539..1048 133..653 257 23.9 Plus
hbs-PA 1228 CG7449-PA 463..818 194..557 232 22.4 Plus
hbs-PC 1235 CG7449-PC 463..818 194..557 232 22.4 Plus
hbs-PB 1235 CG7449-PB 463..818 194..557 232 22.4 Plus
sns-PA 1479 CG33141-PA 320..757 113..557 223 21.3 Plus
sns-PC 1492 CG33141-PC 320..757 113..557 223 21.3 Plus
sns-PB 1542 CG33141-PB 320..757 113..557 223 21.3 Plus
side-V-PA 1140 CG34371-PA 248..876 156..728 221 23.5 Plus
side-V-PB 1174 CG34371-PB 248..876 156..728 221 23.5 Plus
sns-PA 1479 CG33141-PA 497..849 194..556 200 21 Plus
sns-PC 1492 CG33141-PC 497..849 194..556 200 21 Plus
sns-PB 1542 CG33141-PB 497..849 194..556 200 21 Plus
hbs-PA 1228 CG7449-PA 100..429 130..458 195 22.6 Plus
hbs-PC 1235 CG7449-PC 100..429 130..458 195 22.6 Plus
hbs-PB 1235 CG7449-PB 100..429 130..458 195 22.6 Plus
tutl-PE 902 CG15427-PE 184..728 116..664 189 21.3 Plus
tutl-PC 903 CG15427-PC 184..728 116..664 189 21.3 Plus
tutl-PI 963 CG15427-PI 184..728 116..664 189 21.3 Plus
tutl-PF 963 CG15427-PF 184..728 116..664 189 21.3 Plus
tutl-PK 991 CG15427-PK 184..728 116..664 189 21.3 Plus
tutl-PG 1508 CG15427-PG 184..728 116..664 189 21.3 Plus
tutl-PD 1508 CG15427-PD 184..728 116..664 189 21.3 Plus
tutl-PJ 1536 CG15427-PJ 184..728 116..664 189 21.3 Plus
hbs-PA 1228 CG7449-PA 206..524 130..456 186 24.7 Plus
hbs-PC 1235 CG7449-PC 206..524 130..456 186 24.7 Plus
hbs-PB 1235 CG7449-PB 206..524 130..456 186 24.7 Plus
Dscam1-PAD 2017 CG17800-PAD 297..699 122..554 186 20.9 Plus
Dscam1-PAQ 2020 CG17800-PAQ 300..702 122..554 186 20.9 Plus
Dscam1-PAF 2031 CG17800-PAF 234..701 55..557 186 20 Plus
Dscam1-PAG 2032 CG17800-PAG 297..699 122..554 186 20.9 Plus
Dscam1-PBA 2035 CG17800-PBA 300..702 122..554 186 20.9 Plus
Dscam1-PAZ 2035 CG17800-PAZ 300..702 122..554 186 20.9 Plus
Dscam1-PH 2017 CG17800-PH 297..705 122..560 184 20.6 Plus
Dscam1-PBP 2019 CG17800-PBP 299..707 122..560 184 20.6 Plus
Dscam1-PAT 2018 CG17800-PAT 299..674 122..531 179 21.8 Plus
tutl-PH 1533 CG15427-PH 184..753 116..664 178 21.5 Plus
Dscam1-PBO 2019 CG17800-PBO 239..660 85..512 177 21.3 Plus
sns-PA 1479 CG33141-PA 136..463 133..458 160 20.7 Plus
sns-PC 1492 CG33141-PC 136..463 133..458 160 20.7 Plus
sns-PB 1542 CG33141-PB 136..463 133..458 160 20.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20939-PA 740 GI20939-PA 32..731 33..718 3296 86.2 Plus
Dmoj\GI23966-PA 940 GI23966-PA 29..639 61..677 1243 41.7 Plus
Dmoj\GI24340-PA 1040 GI24340-PA 88..702 57..669 1221 41.2 Plus
Dmoj\GI17336-PA 870 GI17336-PA 58..659 61..657 1080 37.7 Plus
Dmoj\GI21128-PA 1171 GI21128-PA 67..551 59..522 836 36.1 Plus
Dmoj\GI21128-PA 1171 GI21128-PA 724..830 545..652 179 35.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17662-PA 741 GL17662-PA 21..741 19..736 3465 90.2 Plus
Dper\GL21886-PA 935 GL21886-PA 29..633 61..668 1236 41.2 Plus
Dper\GL12551-PA 1114 GL12551-PA 37..645 63..676 1234 39.6 Plus
Dper\GL23537-PA 946 GL23537-PA 79..693 57..669 1210 40.9 Plus
Dper\GL11291-PA 1126 GL11291-PA 11..495 59..522 757 36.1 Plus
Dper\GL11291-PA 1126 GL11291-PA 673..856 545..728 179 30.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:35:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17246-PA 741 GA17246-PA 21..741 19..736 3465 90.2 Plus
Dpse\GA17246-PB 1223 GA17246-PB 21..735 19..735 3442 89.4 Plus
Dpse\GA17246-PC 1039 GA17246-PC 21..735 19..735 3436 89.4 Plus
Dpse\GA11933-PA 935 GA11933-PA 29..633 61..668 1236 41.2 Plus
Dpse\GA12940-PA 1002 GA12940-PA 79..693 57..669 1214 40.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:35:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22015-PA 775 GM22015-PA 1..775 1..736 3879 94.5 Plus
Dsec\GM23914-PA 1084 GM23914-PA 38..646 63..676 1238 39.6 Plus
Dsec\GM26222-PA 939 GM26222-PA 29..633 61..668 1227 41.6 Plus
Dsec\GM24110-PA 1001 GM24110-PA 64..689 45..669 1201 40.1 Plus
Dsec\GM14610-PA 1263 GM14610-PA 467..1068 61..657 1092 38.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:35:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11514-PA 774 GD11514-PA 1..774 1..736 3841 93.9 Plus
Dsim\GD20766-PA 939 GD20766-PA 29..633 61..668 1226 41.6 Plus
Dsim\GD18910-PA 1044 GD18910-PA 75..689 57..669 1206 40.4 Plus
Dsim\GD18079-PA 939 GD18079-PA 96..733 56..657 742 29.6 Plus
Dsim\GD25075-PA 1068 GD25075-PA 15..454 101..522 742 35.5 Plus
Dsim\GD25075-PA 1068 GD25075-PA 621..805 545..728 180 30.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:35:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20663-PA 734 GJ20663-PA 19..725 20..718 3317 86.3 Plus
Dvir\GJ10426-PA 1026 GJ10426-PA 88..702 57..669 1221 41 Plus
Dvir\GJ11152-PA 910 GJ11152-PA 45..618 61..677 1086 38.9 Plus
Dvir\GJ16040-PA 832 GJ16040-PA 37..638 61..657 1073 37.8 Plus
Dvir\GJ20976-PA 1163 GJ20976-PA 62..539 64..522 834 35.8 Plus
Dvir\GJ20976-PA 1163 GJ20976-PA 715..821 545..652 177 36.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20624-PA 1097 GK20624-PA 34..724 23..717 3316 88.8 Plus
Dwil\GK13915-PA 936 GK13915-PA 29..633 61..668 1252 42.1 Plus
Dwil\GK13944-PA 1040 GK13944-PA 101..715 57..669 1204 39.9 Plus
Dwil\GK18073-PA 859 GK18073-PA 61..662 61..657 1087 38 Plus
Dwil\GK14218-PA 1856 GK14218-PA 210..769 43..581 957 34.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:35:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12111-PA 539 GE12111-PA 1..508 1..508 2668 99 Plus
Dyak\GE24740-PA 939 GE24740-PA 29..633 61..668 1207 41.1 Plus
Dyak\GE26275-PA 1004 GE26275-PA 76..690 57..669 1203 40.2 Plus
Dyak\GE24765-PA 851 GE24765-PA 50..656 61..662 1093 38.2 Plus
Dyak\GE24130-PA 1671 GE24130-PA 20..565 61..581 951 35.3 Plus

RH73613.hyp Sequence

Translation from 553 to 2763

> RH73613.hyp
MSRTSSRSLFLPLCLLVLSALNGPAAAASRVRVSSSTTMTRNIEEENALL
LLLAGPPVLSESIMGTVGRLPCNVTPPIYEDRVALVIWYKVGLKTPIYSV
DTRDSNFAQGTHWSDETYRERLSFHVEGRAGTLTIKSTTEDDTGEYRCRV
DFQKSPTRNSKVNLTVIIPPESVIILDSKGVTIEDHTLGPYNEGSGINIT
CVAIGGRPQPRVTWLHGNTVYKNASVGQPLSERRVGNTLSLARLERRNLH
MQLTCRAENNNLTTPIISSVVLDMNLRPLIVKLQGENRALSAGNSYQLSC
VVIGARPAPTITWWKGSTPMKNTHEIATPDGNLTTSVLTFTPTIDDRGKF
LSCRAEQSMIPESGMEDGWKLDIYHIPVVSLELGTNSLNSTLREGIDVFF
ECNIKSNPWIYEVSWRHNGKILTNNPAEGIAVSNQSLVLQNASRARSGIY
TCVGSNREGDGESNPVQLDIRFAPVCRPRQRLSYSSGRHETVKVACEIDA
NPAEATYVWKFNATQGETVDIPASQVAVDRGRSIAHYTPMTENDYGTLLC
WATNEIGDQSEPCVYTIFPAGEPDPLLNCTVLNQTSTGFQIECIEGFNGG
LQQDFIMEVYMNGTTRHPKISKSKRPYFEVSGLVPGMGYNVFLIANNSKG
RSNATILQVYTLKDPEKQTVKITFTKSFQGLRPAYTKTKATATTTSDCVC
DEDEFLNLGKGISHDEGTDADQQEGSGGLSFSIIFY*

RH73613.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:55:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG12484-PA 736 CG12484-PA 1..736 1..736 3861 100 Plus
CG12484-PB 1201 CG12484-PB 1..724 1..724 3800 100 Plus
CG12484-PD 1194 CG12484-PD 1..717 1..724 3754 99 Plus
CG12484-PE 1142 CG12484-PE 1..677 1..683 3470 97.1 Plus
CG34114-PC 760 CG34114-PC 38..646 63..676 1223 39.6 Plus