BDGP Sequence Production Resources |
Search the DGRC for RH73632
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 736 |
Well: | 32 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG4300-RB |
Protein status: | RH73632.pep: gold |
Preliminary Size: | 1275 |
Sequenced Size: | 2017 |
Gene | Date | Evidence |
---|---|---|
CG4300 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4300 | 2003-01-29 | Blastp of sequenced clone |
CG4300 | 2008-04-29 | Release 5.5 accounting |
CG4300 | 2008-08-15 | Release 5.9 accounting |
CG4300 | 2008-12-18 | 5.12 accounting |
2017 bp (2017 high quality bases) assembled on 2003-01-29
GenBank Submission: BT003439
> RH73632.complete GATTGGTGCTCGTAAGGCGCATCACTAGTATTTCGTTTCGGTCGGTACGC GGTTCAGCGTTTTTGTTCAACGGATTAGCGCAAGTTAAGCACGATGGCGG CCCAGACGATACTGTTTGATTTCACGCTGGACAAGGACAAGACGGCGGAT GAGGAGGCGCGCCTCCAGGTGGCCAAAATCCTGCGTAACGAGCTGGAGCA GCTGTTCCCCCAGCTGGAGCTGGCCTACTCGATGGAGTCGCCGGAAAACG GCTACTTTGCGGTGCTGCACGAGAACAAGGACACGGTGATTACCTGCCGC ATCTTCCAGCACGGCCTGCTGACGCTCAACGTGGAGTACTTCCTGCCCGA TGGCAAGGAGCCGAGCATATCCTTCGACAGCGGTAAGAGCCTGGAGAATG TCCTGGCAATCAAACTGAAGGCCATCAAGGCCCAGAAGCTGCCGACGCTG AAGCGCGGCGATGTCTCCAGGTACTTCCCATCGTCAGATGAGCGCATCAT CGAGTACGACATCGACAAGGTGGTCTTCGAGGCGCGCTCGCCCTTCCAGA AGATTCAAATCATGCACTCCAAGACCCTGGGCAACATGCTGCTCCTCGAC GAGCTGCAGAACATTGCTGAATCCGATTTGATTTACACGGAGACCCTGAT GTGTCGCGGCGTGGAGAACTACGAGGGCAAGGAGATCTGCATCCTGGGCG GCGGTGATGGCGCCTTGTTGTACGAGCTACTCAAGGAGAATCCGAAGCAT GTGGTGATGCTGGAGATCGATGAGCTTGTGATGCAAACCTGCAACAAATA CCTCAACGTGATCTGCGGCGATGTGCTGGAGAAACGCAAGGGCGATCAGT ACGAGATCATTGTGGGCGACTGTGTGGAGTACTTGAAGAAGTTCATCGCC GAGGGCCGCAAGTTCGACTACGTTTTTGGGGATCTTACGGACATACCCAT AACCGATGCCCCGGAGGGCGAGACCTGGGATTTCATTCGTACCATCTTCG AGCACTCCTTCAAGGTGCTGAAACCCGACGGAAAGTATTTGACTCATGGC AATGGGTCCACCTGCAAGGTGCAGCTGCGTCTATTCGAGGAGCAGTTGAA TTTGCTGCGTCCCAAGGTGAAGTTCACCACCACCAAGGCGTTTGTGCCGT CGTTCATGGAAGAGTGGCTCTTCTACCAAGTGACTTTCGCCTGACAAGCT CAGGTGGACTCCTCAGCAGCAGCAGTAGCTACTTCTAGCGCACCACCAAC CGCCAGTCACACACCAGCATCACACAGCATAAGTCAGGAACCGGGAACCG TCGGAGAGATGCTCCAGCTGCACTCCTACACTGTCACTATCCATGGAGCA GCAGTCGGAGTTCAGGAGGAGGAAAATATGAATAATGGAGCCGTGGGTCA ATTGAAACCGCGACCAAGGCGTCGAAAGAAGAAGCGTGTACACTACCATC ACACGCTGGTTTCTTAGTCCAGGAAACACGGAATCCGATGCACAAGCTAA TCGCCATCATCGAAACCATCGCAACAAAACCCAAGACAGAGGAAAACACG CACTTCCAATGGCTGTTACTTACAATTGAAAACCAAACCAAATACTGAAC CCAATTCGTTTACGCTTAAGTTAGGCTTTAGTTCCGTTTCTCGTTCACTG ATTTCAATGCTAAAAACTAAGACAAAAGTACAACCTTTAAGCAAGGACAG GCTAAAATAATAACTTATGTATTCGTGTTTATTTGAATTACGCCTAAGCA TAGCATGTTGGCCAACTATTTGTAATATTTCGTATAACGTGTACATCTAT ATAATGTAGACCATATGTTTAGTTATCCATTAACAAGCAAAGTGGAGCGG GGAAGGCCCAAGGATCGAGGATGTGTGTATGTGGGTGTGAGGAAGCGTAG CAGGAACACCAACTTTTATTGCTGTAATAACGATTAATACCAAACATTTT AAACGGGAGAACTAATAAAGTTAAATAAATAGTCGTACGCAGAAATAAAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4300-RB | 2080 | CG4300-RB | 39..2033 | 5..1999 | 9975 | 100 | Plus |
CG4300-RA | 2083 | CG4300-RA | 521..2036 | 484..1999 | 7580 | 100 | Plus |
CG4300.a | 1929 | CG4300.a | 494..1882 | 611..1999 | 6945 | 100 | Plus |
CG4300.a | 1929 | CG4300.a | 11..494 | 5..488 | 2420 | 100 | Plus |
CG4300-RA | 2083 | CG4300-RA | 39..413 | 5..379 | 1875 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 12262308..12263693 | 1996..611 | 6840 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 12267542..12267915 | 378..5 | 1840 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 12264149..12264272 | 608..485 | 590 | 98.4 | Minus |
chr3L | 24539361 | chr3L | 12264652..12264760 | 487..379 | 545 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 12271653..12273041 | 1999..611 | 6945 | 100 | Minus |
3L | 28110227 | 3L | 12276890..12277263 | 378..5 | 1870 | 100 | Minus |
3L | 28110227 | 3L | 12273498..12273623 | 610..485 | 630 | 100 | Minus |
3L | 28110227 | 3L | 12274003..12274111 | 487..379 | 545 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 12264753..12266141 | 1999..611 | 6945 | 100 | Minus |
3L | 28103327 | 3L | 12269990..12270363 | 378..5 | 1870 | 100 | Minus |
3L | 28103327 | 3L | 12266598..12266723 | 610..485 | 630 | 100 | Minus |
3L | 28103327 | 3L | 12267103..12267211 | 487..379 | 545 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2349..2424 | 1214..1291 | 123 | 72 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12262308..12263693 | 611..1996 | 99 | <- | Minus |
chr3L | 12264147..12264269 | 488..610 | 97 | <- | Minus |
chr3L | 12264652..12264760 | 379..487 | 100 | <- | Minus |
chr3L | 12267542..12267918 | 1..378 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RB | 1..1101 | 94..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RB | 1..1101 | 94..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RB | 1..1101 | 94..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RB | 1..1101 | 94..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RC | 1..1374 | 94..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RB | 1..1995 | 2..1996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RB | 1..1995 | 2..1996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RB | 1..1980 | 17..1996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RB | 1..1995 | 2..1996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RB | 1..1980 | 17..1996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12271656..12273041 | 611..1996 | 100 | <- | Minus |
3L | 12273498..12273620 | 488..610 | 100 | <- | Minus |
3L | 12274003..12274111 | 379..487 | 100 | <- | Minus |
3L | 12276890..12277266 | 1..378 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12271656..12273041 | 611..1996 | 100 | <- | Minus |
3L | 12273498..12273620 | 488..610 | 100 | <- | Minus |
3L | 12274003..12274111 | 379..487 | 100 | <- | Minus |
3L | 12276890..12277266 | 1..378 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12271656..12273041 | 611..1996 | 100 | <- | Minus |
3L | 12273498..12273620 | 488..610 | 100 | <- | Minus |
3L | 12274003..12274111 | 379..487 | 100 | <- | Minus |
3L | 12276890..12277266 | 1..378 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 12267103..12267211 | 379..487 | 100 | <- | Minus |
arm_3L | 12264756..12266141 | 611..1996 | 100 | <- | Minus |
arm_3L | 12266598..12266720 | 488..610 | 100 | <- | Minus |
arm_3L | 12269990..12270366 | 1..378 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12267103..12267211 | 379..487 | 100 | <- | Minus |
3L | 12264756..12266141 | 611..1996 | 100 | <- | Minus |
3L | 12266598..12266720 | 488..610 | 100 | <- | Minus |
3L | 12269990..12270366 | 1..378 | 99 | Minus |
Translation from 93 to 1193
> RH73632.pep MAAQTILFDFTLDKDKTADEEARLQVAKILRNELEQLFPQLELAYSMESP ENGYFAVLHENKDTVITCRIFQHGLLTLNVEYFLPDGKEPSISFDSGKSL ENVLAIKLKAIKAQKLPTLKRGDVSRYFPSSDERIIEYDIDKVVFEARSP FQKIQIMHSKTLGNMLLLDELQNIAESDLIYTETLMCRGVENYEGKEICI LGGGDGALLYELLKENPKHVVMLEIDELVMQTCNKYLNVICGDVLEKRKG DQYEIIVGDCVEYLKKFIAEGRKFDYVFGDLTDIPITDAPEGETWDFIRT IFEHSFKVLKPDGKYLTHGNGSTCKVQLRLFEEQLNLLRPKVKFTTTKAF VPSFMEEWLFYQVTFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24990-PA | 367 | GF24990-PA | 1..367 | 1..366 | 1683 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13840-PA | 367 | GG13840-PA | 1..367 | 1..366 | 1777 | 91.8 | Plus |
Dere\GG16982-PA | 287 | GG16982-PA | 26..197 | 140..320 | 149 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16076-PA | 367 | GH16076-PA | 1..367 | 1..366 | 1537 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sms-PC | 457 | CG4300-PC | 1..366 | 1..366 | 1899 | 100 | Plus |
Sms-PB | 366 | CG4300-PB | 1..366 | 1..366 | 1899 | 100 | Plus |
Sms-PD | 458 | CG4300-PD | 1..367 | 1..366 | 1766 | 92.9 | Plus |
Sms-PA | 367 | CG4300-PA | 1..367 | 1..366 | 1766 | 92.9 | Plus |
SpdS-PC | 287 | CG8327-PC | 26..196 | 140..319 | 156 | 30.5 | Plus |
SpdS-PA | 287 | CG8327-PA | 26..196 | 140..319 | 156 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12338-PA | 454 | GI12338-PA | 1..363 | 1..362 | 1535 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25003-PA | 367 | GL25003-PA | 1..367 | 1..366 | 1606 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18092-PB | 369 | GA18092-PB | 1..369 | 1..366 | 1698 | 85.4 | Plus |
Dpse\GA18092-PA | 367 | GA18092-PA | 1..367 | 1..366 | 1606 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24668-PA | 367 | GM24668-PA | 1..367 | 1..366 | 1797 | 92.4 | Plus |
Dsec\GM23823-PA | 287 | GM23823-PA | 26..197 | 140..320 | 151 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12732-PA | 420 | GD12732-PA | 1..420 | 1..366 | 1859 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12230-PA | 367 | GJ12230-PA | 1..367 | 1..366 | 1573 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12827-PA | 433 | GK12827-PA | 1..315 | 1..314 | 1395 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20131-PA | 467 | GE20131-PA | 101..467 | 47..366 | 1645 | 86.6 | Plus |
Dyak\GE20131-PA | 467 | GE20131-PA | 1..95 | 1..95 | 492 | 98.9 | Plus |
Dyak\GE25970-PA | 287 | GE25970-PA | 26..197 | 140..320 | 151 | 31.2 | Plus |
Translation from 93 to 1193
> RH73632.hyp MAAQTILFDFTLDKDKTADEEARLQVAKILRNELEQLFPQLELAYSMESP ENGYFAVLHENKDTVITCRIFQHGLLTLNVEYFLPDGKEPSISFDSGKSL ENVLAIKLKAIKAQKLPTLKRGDVSRYFPSSDERIIEYDIDKVVFEARSP FQKIQIMHSKTLGNMLLLDELQNIAESDLIYTETLMCRGVENYEGKEICI LGGGDGALLYELLKENPKHVVMLEIDELVMQTCNKYLNVICGDVLEKRKG DQYEIIVGDCVEYLKKFIAEGRKFDYVFGDLTDIPITDAPEGETWDFIRT IFEHSFKVLKPDGKYLTHGNGSTCKVQLRLFEEQLNLLRPKVKFTTTKAF VPSFMEEWLFYQVTFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4300-PB | 366 | CG4300-PB | 1..366 | 1..366 | 1899 | 100 | Plus |
CG4300-PC | 457 | CG4300-PC | 1..366 | 1..366 | 1899 | 100 | Plus |
CG4300-PA | 367 | CG4300-PA | 1..367 | 1..366 | 1766 | 92.9 | Plus |
CG4300-PD | 458 | CG4300-PD | 1..367 | 1..366 | 1766 | 92.9 | Plus |
SpdS-PC | 287 | CG8327-PC | 26..196 | 140..319 | 156 | 30.5 | Plus |