BDGP Sequence Production Resources |
Search the DGRC for RH74174
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 741 |
Well: | 74 |
Vector: | pFlc-1 |
Associated Gene/Transcript | YL-1-RA |
Protein status: | RH74174.pep: gold |
Preliminary Size: | 1148 |
Sequenced Size: | 1236 |
Gene | Date | Evidence |
---|---|---|
CG4621 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4621 | 2002-06-13 | Blastp of sequenced clone |
CG4621 | 2003-01-01 | Sim4 clustering to Release 3 |
YL-1 | 2008-04-29 | Release 5.5 accounting |
YL-1 | 2008-08-15 | Release 5.9 accounting |
YL-1 | 2008-12-18 | 5.12 accounting |
1236 bp (1236 high quality bases) assembled on 2002-06-13
GenBank Submission: AY122237
> RH74174.complete GATTGGTCACACTGCTCTGCTTGTTTACATTTACAAATTGTAAAATATTA TTATTTAATAGCTGCTTTAAATCATAGTTTCTATATATAAATAACAAAAA TGGCTGCCTCGCGATCACGGCGCAACAATGCCGGCAACAAAATAGCTCAT TTGCTCAATGAGGAAGAGGAGGACGACTTTTACAAAACGTCCTATGGTGG ATTTCAGGAAGACGAAGAGGATAAGGAATACGAGCAAAAAGACGAAGAGG AAGATGTGGTTGACTCCGACTTCAGTATCGATGAGAACGACGAGCCCGTT TCGGATCAGGAAGAGGCGCCCGAGAAAAAGCGGAAACGCGGTGTCGTTAA CACAAAGGCTTATAAGGAAACCAAGCCTGCAGTCAAAAAGGAAACAAAGG CAACGCCGGCCCTGCACAAGAAACGACCTGGTGGTGGGGTAACGAAACGG CGGCCACGTCCACGCTTCACGGTCCTCGATTCCGGCCGCAAATCCATACG CACTTCCACGGCCATCAAGACACAGGCTACCAAAATACGCCTCAAAGAGT TGGACGATGCCCGCAAGCGCAAAAAGAAGAAGGTGCGCGTGGAGGACTAC ATGCCCACGCAGGAGGAGCTGCTGGAGGAGGCCAAAATAACCGAGGAAGA AAACACTAAATCTTTGGAGAAATTCCAGAAAATGGAGCTGGAGAAGAAGA AATCACGTCCCACCAAGCGCACGTTCTCCGGACCCACGATACGCTACCAC TCACTAACCATGCCAGCGATGCGAAAGCCCACTCGCGGAGCAAACCCTGC GGTCGATTCAAAGGATCTTGCTGGGAAGTGCGAACGCACATTCGTTACAA TCGAGAACGATTTCAATGACAAGGTGTTTCAAAGCCTCTTCCGCCACAAG GCGCCTCCCAAAGCCAGCAATGGCATCTGTCCAATCACCAGGCTGCCAGC CCGTTACTTTGACCCGATCACACAGCAGCCATACTACAGCATCCAGGCCT TCAAAATTCTGCGCGAAGCCTACTACATGCAGCTGGAACAGCAAGGCGGC GGCAGCGAGCAACCCGAACTGGCCAAATGGCTGGAATGGCGCAAGCTGGT CAAGGAGAATCGTCTGAAGGCTTCGGCAGCTGCCAGCAAAAACGGAGATA ACTAATAATGCTATCAATTTTATAGTTCATTAAGCTATACGTATTTTTCG AATAAAAAGGTATAAGAAACCAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
YL-1-RA | 1351 | YL-1-RA | 24..1248 | 2..1226 | 6080 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10970071..10970623 | 667..1219 | 2765 | 100 | Plus |
chr2L | 23010047 | chr2L | 10969710..10970012 | 365..667 | 1515 | 100 | Plus |
chr2L | 23010047 | chr2L | 10969211..10969443 | 2..234 | 1150 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 10969503..10969636 | 234..367 | 670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10971316..10971875 | 667..1226 | 2770 | 99.6 | Plus |
2L | 23513712 | 2L | 10970955..10971257 | 365..667 | 1515 | 100 | Plus |
2L | 23513712 | 2L | 10970456..10970688 | 2..234 | 1150 | 99.6 | Plus |
2L | 23513712 | 2L | 10970748..10970881 | 234..367 | 670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10971316..10971875 | 667..1226 | 2770 | 99.6 | Plus |
2L | 23513712 | 2L | 10970955..10971257 | 365..667 | 1515 | 100 | Plus |
2L | 23513712 | 2L | 10970456..10970688 | 2..234 | 1150 | 99.5 | Plus |
2L | 23513712 | 2L | 10970748..10970881 | 234..367 | 670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 5812..5854 | 51..8 | 118 | 77.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10969210..10969442 | 1..233 | 99 | -> | Plus |
chr2L | 10969503..10969635 | 234..366 | 100 | -> | Plus |
chr2L | 10969712..10970012 | 367..667 | 100 | -> | Plus |
chr2L | 10970072..10970625 | 668..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
YL-1-RA | 1..1056 | 100..1155 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
YL-1-RA | 1..1056 | 100..1155 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
YL-1-RA | 1..1056 | 100..1155 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
YL-1-RA | 1..1056 | 100..1155 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
YL-1-RA | 1..1056 | 100..1155 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
YL-1-RA | 2..1221 | 2..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
YL-1-RA | 18..1238 | 1..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
YL-1-RA | 13..1233 | 1..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
YL-1-RA | 2..1221 | 2..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
YL-1-RA | 13..1233 | 1..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10970455..10970687 | 1..233 | 99 | -> | Plus |
2L | 10970748..10970880 | 234..366 | 100 | -> | Plus |
2L | 10970957..10971257 | 367..667 | 100 | -> | Plus |
2L | 10971317..10971870 | 668..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10970455..10970687 | 1..233 | 99 | -> | Plus |
2L | 10970748..10970880 | 234..366 | 100 | -> | Plus |
2L | 10970957..10971257 | 367..667 | 100 | -> | Plus |
2L | 10971317..10971870 | 668..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10970455..10970687 | 1..233 | 99 | -> | Plus |
2L | 10970748..10970880 | 234..366 | 100 | -> | Plus |
2L | 10970957..10971257 | 367..667 | 100 | -> | Plus |
2L | 10971317..10971870 | 668..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10970455..10970687 | 1..233 | 99 | -> | Plus |
arm_2L | 10970748..10970880 | 234..366 | 100 | -> | Plus |
arm_2L | 10970957..10971257 | 367..667 | 100 | -> | Plus |
arm_2L | 10971317..10971870 | 668..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10970455..10970687 | 1..233 | 99 | -> | Plus |
2L | 10970748..10970880 | 234..366 | 100 | -> | Plus |
2L | 10970957..10971257 | 367..667 | 100 | -> | Plus |
2L | 10971317..10971870 | 668..1221 | 99 | Plus |
Translation from 99 to 1154
> RH74174.hyp MAASRSRRNNAGNKIAHLLNEEEEDDFYKTSYGGFQEDEEDKEYEQKDEE EDVVDSDFSIDENDEPVSDQEEAPEKKRKRGVVNTKAYKETKPAVKKETK ATPALHKKRPGGGVTKRRPRPRFTVLDSGRKSIRTSTAIKTQATKIRLKE LDDARKRKKKKVRVEDYMPTQEELLEEAKITEEENTKSLEKFQKMELEKK KSRPTKRTFSGPTIRYHSLTMPAMRKPTRGANPAVDSKDLAGKCERTFVT IENDFNDKVFQSLFRHKAPPKASNGICPITRLPARYFDPITQQPYYSIQA FKILREAYYMQLEQQGGGSEQPELAKWLEWRKLVKENRLKASAAASKNGD N*
Translation from 99 to 1154
> RH74174.pep MAASRSRRNNAGNKIAHLLNEEEEDDFYKTSYGGFQEDEEDKEYEQKDEE EDVVDSDFSIDENDEPVSDQEEAPEKKRKRGVVNTKAYKETKPAVKKETK ATPALHKKRPGGGVTKRRPRPRFTVLDSGRKSIRTSTAIKTQATKIRLKE LDDARKRKKKKVRVEDYMPTQEELLEEAKITEEENTKSLEKFQKMELEKK KSRPTKRTFSGPTIRYHSLTMPAMRKPTRGANPAVDSKDLAGKCERTFVT IENDFNDKVFQSLFRHKAPPKASNGICPITRLPARYFDPITQQPYYSIQA FKILREAYYMQLEQQGGGSEQPELAKWLEWRKLVKENRLKASAAASKNGD N*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15835-PA | 353 | GF15835-PA | 1..353 | 1..351 | 1563 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23686-PA | 351 | GG23686-PA | 1..350 | 1..350 | 1663 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17016-PA | 350 | GH17016-PA | 1..350 | 1..350 | 1413 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
YL-1-PB | 351 | CG4621-PB | 1..351 | 1..351 | 1818 | 100 | Plus |
YL-1-PA | 351 | CG4621-PA | 1..351 | 1..351 | 1818 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10744-PA | 351 | GI10744-PA | 1..346 | 1..345 | 1372 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13769-PA | 352 | GL13769-PA | 1..351 | 1..350 | 1413 | 83.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26786-PA | 352 | GA26786-PA | 1..351 | 1..350 | 1407 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18769-PA | 351 | GM18769-PA | 1..351 | 1..351 | 1803 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23743-PA | 351 | GD23743-PA | 1..351 | 1..351 | 1814 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10687-PA | 353 | GJ10687-PA | 1..347 | 1..345 | 1456 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11323-PA | 351 | GK11323-PA | 1..351 | 1..349 | 1454 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18498-PA | 351 | GE18498-PA | 1..351 | 1..351 | 1720 | 95.2 | Plus |