BDGP Sequence Production Resources |
Search the DGRC for RH74410
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 744 |
Well: | 10 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7172-RA |
Protein status: | RH74410.pep: gold |
Preliminary Size: | 754 |
Sequenced Size: | 853 |
Gene | Date | Evidence |
---|---|---|
CG7172 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7172 | 2002-04-26 | Blastp of sequenced clone |
CG7172 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7172 | 2008-04-29 | Release 5.5 accounting |
CG7172 | 2008-08-15 | Release 5.9 accounting |
CG7172 | 2008-12-18 | 5.12 accounting |
853 bp (853 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113645
> RH74410.complete ATGGATTTTCTCTCATCTCTATTGGAAATTAATAAACTATTTTGCTTAGA CAATACAATTCAAAATGAATGTAGGCAAGATAAGCGTTGTCACCAGACTT CCTGCCCTCCGCTCGTGCGCCCAGTACTCGAGCGCTGCGAAAGCGGAACT GCCGGCTTCCTTGGTCGGCGACGTGGATGTGGAACCAACATATCCCCAGA CGGTGGACAGATCCGGCCTGCAACCACAACACAAAAATGTGCTCCTTAAC AAATTGCCATACCAGGAACCTCACTCCTGGATTCATTTGACCGAGAAGTA CCAGAGACAGGCATTCGGCCGGTATGGGGCCCAGAGCAATGTGAATCCCA AGATTTGCTTCGATTCCCACGGAGAGAAAGACAGCAGGCAGGTTATGCAA CTAGAAACACTCCTGAAAATGCTGGAGAAGAACCGCGCGCAGAAGGCAGA GGAGCTGGCAAGGATAAATGCCCGTGAAGAGGACATTGCGAAGAAGATGG AGAAGTTGACACAGTGGAAGGCGGACCTGCACGCGAAGATCGCTAAGCGG GAGGCGGATGCAGCGGCAGCCATACAACGCAAGGAACGCCTGGTAGAGGA GGTGCGCCGACACTTCGGGTTCAAGGTGGATACACGCGACGAACGCTTTA AGGAAATGCTAGAGCAAAAAGAGAAGGAGGACAAGAAGAAGCAGAAGGAG GCCAAGCGAAAGGCCAAGGAGGAGAAGATGATGGCCAAGCTGGTAGAGAA AGCATCAGTGTAATATTTGTAGTATCAAAACCATCGATTTAAGCGAAGAA CTGTTGTATGTTACACTAAAATAAAAACACTGCAAAAAGAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7172-RA | 854 | CG7172-RA | 19..854 | 4..839 | 4180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21556995..21557830 | 839..4 | 4180 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21568057..21568894 | 841..4 | 4190 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21561157..21561994 | 841..4 | 4190 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21556995..21557833 | 1..839 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7172-RA | 1..699 | 65..763 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7172-RA | 1..699 | 65..763 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7172-RA | 1..699 | 65..763 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7172-RA | 1..699 | 65..763 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7172-RA | 1..699 | 65..763 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7172-RA | 16..854 | 1..839 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7172-RA | 16..854 | 1..839 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7172-RA | 2..840 | 1..839 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7172-RA | 1..836 | 4..839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7172-RA | 2..840 | 1..839 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21568059..21568897 | 1..839 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21568059..21568897 | 1..839 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21568059..21568897 | 1..839 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21561159..21561997 | 1..839 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21561159..21561997 | 1..839 | 99 | Minus |
Translation from 64 to 762
> RH74410.pep MNVGKISVVTRLPALRSCAQYSSAAKAELPASLVGDVDVEPTYPQTVDRS GLQPQHKNVLLNKLPYQEPHSWIHLTEKYQRQAFGRYGAQSNVNPKICFD SHGEKDSRQVMQLETLLKMLEKNRAQKAEELARINAREEDIAKKMEKLTQ WKADLHAKIAKREADAAAAIQRKERLVEEVRRHFGFKVDTRDERFKEMLE QKEKEDKKKQKEAKRKAKEEKMMAKLVEKASV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10700-PA | 230 | GF10700-PA | 1..229 | 1..231 | 858 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13220-PA | 231 | GG13220-PA | 1..231 | 1..231 | 1142 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14728-PA | 232 | GH14728-PA | 1..232 | 1..231 | 724 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CRIF-PA | 232 | CG7172-PA | 1..232 | 1..232 | 1177 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13381-PA | 231 | GI13381-PA | 20..231 | 21..231 | 699 | 67.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25171-PA | 230 | GL25171-PA | 1..229 | 1..231 | 607 | 65.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22126-PA | 232 | GM22126-PA | 1..231 | 1..231 | 1195 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12105-PA | 230 | GD12105-PA | 1..229 | 1..231 | 1092 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11504-PA | 231 | GJ11504-PA | 1..231 | 1..231 | 676 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18917-PA | 238 | GK18917-PA | 7..238 | 8..232 | 641 | 62.5 | Plus |
Translation from 64 to 762
> RH74410.hyp MNVGKISVVTRLPALRSCAQYSSAAKAELPASLVGDVDVEPTYPQTVDRS GLQPQHKNVLLNKLPYQEPHSWIHLTEKYQRQAFGRYGAQSNVNPKICFD SHGEKDSRQVMQLETLLKMLEKNRAQKAEELARINAREEDIAKKMEKLTQ WKADLHAKIAKREADAAAAIQRKERLVEEVRRHFGFKVDTRDERFKEMLE QKEKEDKKKQKEAKRKAKEEKMMAKLVEKASV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7172-PA | 232 | CG7172-PA | 1..232 | 1..232 | 1177 | 100 | Plus |