BDGP Sequence Production Resources |
Search the DGRC for RH74717
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 747 |
Well: | 17 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11550-RA |
Protein status: | RH74717.pep: gold |
Preliminary Size: | 897 |
Sequenced Size: | 1143 |
Gene | Date | Evidence |
---|---|---|
CG11550 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11550 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11550 | 2005-05-18 | Blastp of sequenced clone |
CG11550 | 2008-04-29 | Release 5.5 accounting |
CG11550 | 2008-08-15 | Release 5.9 accounting |
CG11550 | 2008-12-18 | 5.12 accounting |
1143 bp (1143 high quality bases) assembled on 2005-05-18
GenBank Submission: BT022706
> RH74717.complete GATTCGAGAGTTGACCGCGCTCAATCGCGTTTCGGGCCAATTAGCGCAAC AATCAGAAGTAAATCCTCGGCGCAGTCGACTACGATGAAGGAGGCCAACT TGGAGGATCAGTATGCCAGTTTTCCGGAGATCAGGCGACCGGAGGTGCTG AAATTTCTGGACTGGATCCACGCGCAGCCGCACATCTCGGATAGGTTTTC CGAGGGCGAGGCACTGCACTTCTTTCACGCCTGCCGCTACAGCATGGAGG TGGCCAAGCAGGTCCTGGACACCAATCTCACGGCCCGCACCCACCTGGAG GAGTTCTTCGTGAACCTCGATTGCGAGCGGCCCGAGATCAGGCGCGCCAT GCGAACAGTCTCTATTGTTCCCCTGCCAGGAGCCACTCCCGAAGGATACC GGGTGATTCTCGCCAAGCTTGATGACCTGAATACCTCAAATTATAATTTT GCAGATGTCATGAAGCTCTATTGCATGGTGTTTGACTTTTGGATGTATGA AGATGGCATTCAGCCGGGACACGTTATTGTAATCGATCTGAAAAACACTT CCTTGGGGCATGTAGCCCGCATTGGACTCTTGCAAATGAAGAAGTTCCTT TACTACCTGCAGGAAGCGGCTGCCATCCGGTTGATAGGCTTTCACTTCAT CAACATTGTACCGTTCATGGACAAGATTCTTGCGCTGATGACTCCGTTTA TGAAAAAGGAACTGACCACTGTGCTCCATATGCACAGTGACCTAAAGGAA TTCTACAAGTTTGTGCCCCAGGAAATGCTTCCCAAGGAATATGGTGGTCA ACTGGAGGAGGCAAACGTGGCGAAAGAGATTTACTATAAGAAGTTGCTGG ACAATCGAAAGGAAATGATCGAGTTTGAGACTCGCCACCAGGTGAACGAG AAATTGCGACCCGGCAAGGCCAAGAATGCATCCGACTTATTCGGGATTGA GGGAAACTTCAAGAAGTTGGATATCGATTAGGGCAAGGGCTCTACATTAT TTTAGAAAATTGTTTTCTTTTACTGGTGTTTGATGACATAATTAAAGCGG ACCGGATTCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 27501878..27502235 | 359..2 | 1775 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 27500502..27500738 | 1061..825 | 1185 | 100 | Minus |
chr3R | 27901430 | chr3R | 27500786..27501002 | 826..610 | 1085 | 100 | Minus |
chr3R | 27901430 | chr3R | 27501055..27501200 | 613..468 | 730 | 100 | Minus |
chr3R | 27901430 | chr3R | 27501688..27501795 | 467..360 | 540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 31679523..31679880 | 359..2 | 1775 | 99.7 | Minus |
3R | 32079331 | 3R | 31678144..31678383 | 1064..825 | 1200 | 100 | Minus |
3R | 32079331 | 3R | 31678431..31678647 | 826..610 | 1085 | 100 | Minus |
3R | 32079331 | 3R | 31678700..31678845 | 613..468 | 730 | 100 | Minus |
3R | 32079331 | 3R | 31679333..31679440 | 467..360 | 540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 31420354..31420711 | 359..2 | 1775 | 99.7 | Minus |
3R | 31820162 | 3R | 31418975..31419214 | 1064..825 | 1200 | 100 | Minus |
3R | 31820162 | 3R | 31419262..31419478 | 826..610 | 1085 | 100 | Minus |
3R | 31820162 | 3R | 31419531..31419676 | 613..468 | 730 | 100 | Minus |
3R | 31820162 | 3R | 31420164..31420271 | 467..360 | 540 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 27500502..27500736 | 827..1061 | 100 | <- | Minus |
chr3R | 27500786..27500999 | 613..826 | 100 | <- | Minus |
chr3R | 27501056..27501200 | 468..612 | 100 | <- | Minus |
chr3R | 27501688..27501795 | 360..467 | 100 | <- | Minus |
chr3R | 27501878..27502235 | 1..359 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11550-RA | 1..897 | 85..981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11550-RA | 1..897 | 85..981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11550-RA | 1..897 | 85..981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11550-RA | 1..897 | 85..981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11550-RA | 1..897 | 85..981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11550-RA | 1..980 | 2..981 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11550-RA | 1..980 | 2..981 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11550-RA | 1..1060 | 2..1061 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11550-RA | 1..980 | 2..981 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11550-RA | 1..1060 | 2..1061 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31679333..31679440 | 360..467 | 100 | <- | Minus |
3R | 31678431..31678644 | 613..826 | 100 | <- | Minus |
3R | 31678147..31678381 | 827..1061 | 100 | <- | Minus |
3R | 31678701..31678845 | 468..612 | 100 | <- | Minus |
3R | 31679523..31679880 | 1..359 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31679333..31679440 | 360..467 | 100 | <- | Minus |
3R | 31678431..31678644 | 613..826 | 100 | <- | Minus |
3R | 31678147..31678381 | 827..1061 | 100 | <- | Minus |
3R | 31678701..31678845 | 468..612 | 100 | <- | Minus |
3R | 31679523..31679880 | 1..359 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31679333..31679440 | 360..467 | 100 | <- | Minus |
3R | 31678431..31678644 | 613..826 | 100 | <- | Minus |
3R | 31678147..31678381 | 827..1061 | 100 | <- | Minus |
3R | 31678701..31678845 | 468..612 | 100 | <- | Minus |
3R | 31679523..31679880 | 1..359 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 27503869..27504103 | 827..1061 | 100 | <- | Minus |
arm_3R | 27504153..27504366 | 613..826 | 100 | <- | Minus |
arm_3R | 27504423..27504567 | 468..612 | 100 | <- | Minus |
arm_3R | 27505055..27505162 | 360..467 | 100 | <- | Minus |
arm_3R | 27505245..27505602 | 1..359 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31418978..31419212 | 827..1061 | 100 | <- | Minus |
3R | 31419262..31419475 | 613..826 | 100 | <- | Minus |
3R | 31419532..31419676 | 468..612 | 100 | <- | Minus |
3R | 31420164..31420271 | 360..467 | 100 | <- | Minus |
3R | 31420354..31420711 | 1..359 | 99 | Minus |
Translation from 3 to 980
> RH74717.hyp SRVDRAQSRFGPISATIRSKSSAQSTTMKEANLEDQYASFPEIRRPEVLK FLDWIHAQPHISDRFSEGEALHFFHACRYSMEVAKQVLDTNLTARTHLEE FFVNLDCERPEIRRAMRTVSIVPLPGATPEGYRVILAKLDDLNTSNYNFA DVMKLYCMVFDFWMYEDGIQPGHVIVIDLKNTSLGHVARIGLLQMKKFLY YLQEAAAIRLIGFHFINIVPFMDKILALMTPFMKKELTTVLHMHSDLKEF YKFVPQEMLPKEYGGQLEEANVAKEIYYKKLLDNRKEMIEFETRHQVNEK LRPGKAKNASDLFGIEGNFKKLDID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11550-PA | 298 | CG11550-PA | 1..298 | 28..325 | 1563 | 100 | Plus |
CG2663-PC | 308 | CG2663-PC | 17..308 | 42..325 | 441 | 32.4 | Plus |
CG2663-PA | 308 | CG2663-PA | 17..308 | 42..325 | 441 | 32.4 | Plus |
CG12926-PA | 313 | CG12926-PA | 22..313 | 35..325 | 349 | 29.9 | Plus |
CG3823-PA | 295 | CG3823-PA | 22..295 | 53..325 | 340 | 26.7 | Plus |
Translation from 84 to 980
> RH74717.pep MKEANLEDQYASFPEIRRPEVLKFLDWIHAQPHISDRFSEGEALHFFHAC RYSMEVAKQVLDTNLTARTHLEEFFVNLDCERPEIRRAMRTVSIVPLPGA TPEGYRVILAKLDDLNTSNYNFADVMKLYCMVFDFWMYEDGIQPGHVIVI DLKNTSLGHVARIGLLQMKKFLYYLQEAAAIRLIGFHFINIVPFMDKILA LMTPFMKKELTTVLHMHSDLKEFYKFVPQEMLPKEYGGQLEEANVAKEIY YKKLLDNRKEMIEFETRHQVNEKLRPGKAKNASDLFGIEGNFKKLDID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23257-PA | 298 | GF23257-PA | 1..298 | 1..298 | 1419 | 87.2 | Plus |
Dana\GF17713-PA | 308 | GF17713-PA | 36..308 | 26..298 | 452 | 33.9 | Plus |
Dana\GF12489-PA | 311 | GF12489-PA | 19..311 | 7..298 | 364 | 28.7 | Plus |
Dana\GF12490-PA | 308 | GF12490-PA | 29..308 | 20..298 | 344 | 31.1 | Plus |
Dana\GF25066-PA | 311 | GF25066-PA | 18..311 | 8..298 | 320 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11860-PA | 298 | GG11860-PA | 1..298 | 1..298 | 1535 | 95.6 | Plus |
Dere\GG11035-PA | 308 | GG11035-PA | 36..308 | 26..298 | 450 | 33.2 | Plus |
Dere\GG25270-PA | 313 | GG25270-PA | 18..313 | 2..298 | 364 | 30.7 | Plus |
Dere\GG19584-PA | 295 | GG19584-PA | 22..295 | 26..298 | 349 | 27.4 | Plus |
Dere\GG15223-PA | 311 | GG15223-PA | 17..311 | 7..298 | 329 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18936-PA | 298 | GH18936-PA | 1..298 | 1..298 | 1353 | 80.9 | Plus |
Dgri\GH22617-PA | 308 | GH22617-PA | 36..308 | 26..298 | 447 | 33.6 | Plus |
Dgri\GH15199-PA | 308 | GH15199-PA | 37..308 | 27..298 | 362 | 30.7 | Plus |
Dgri\GH22856-PA | 316 | GH22856-PA | 33..316 | 17..298 | 361 | 31.1 | Plus |
Dgri\GH15439-PA | 324 | GH15439-PA | 26..324 | 3..298 | 331 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11550-PA | 298 | CG11550-PA | 1..298 | 1..298 | 1563 | 100 | Plus |
CG2663-PC | 308 | CG2663-PC | 17..308 | 15..298 | 441 | 32.4 | Plus |
CG2663-PA | 308 | CG2663-PA | 17..308 | 15..298 | 441 | 32.4 | Plus |
CG12926-PA | 313 | CG12926-PA | 22..313 | 8..298 | 349 | 29.9 | Plus |
CG3823-PA | 295 | CG3823-PA | 22..295 | 26..298 | 340 | 26.7 | Plus |
CG30339-PA | 308 | CG30339-PA | 23..308 | 15..298 | 322 | 31.2 | Plus |
CG33514-PA | 311 | CG33514-PA | 17..311 | 7..298 | 322 | 27.5 | Plus |
CG33966-PA | 310 | CG33966-PA | 29..310 | 20..298 | 312 | 28.2 | Plus |
CG3091-PC | 303 | CG3091-PC | 32..280 | 27..257 | 289 | 25.3 | Plus |
CG3091-PA | 303 | CG3091-PA | 32..280 | 27..257 | 289 | 25.3 | Plus |
CG3191-PC | 309 | CG3191-PC | 22..288 | 7..263 | 272 | 24.3 | Plus |
CG3191-PA | 309 | CG3191-PA | 22..288 | 7..263 | 272 | 24.3 | Plus |
CG10300-PA | 311 | CG10300-PA | 11..311 | 2..298 | 267 | 23.8 | Plus |
CG10657-PA | 334 | CG10657-PA | 49..334 | 16..298 | 237 | 25.8 | Plus |
CG31636-PB | 313 | CG31636-PB | 35..313 | 26..298 | 235 | 26.1 | Plus |
CG31636-PA | 313 | CG31636-PA | 35..313 | 26..298 | 235 | 26.1 | Plus |
CG33965-PA | 317 | CG33965-PA | 34..317 | 20..298 | 195 | 20.8 | Plus |
CG5958-PA | 294 | CG5958-PA | 35..262 | 15..240 | 173 | 24 | Plus |
CG10301-PB | 306 | CG10301-PB | 14..306 | 7..298 | 162 | 19 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24455-PA | 298 | GI24455-PA | 1..298 | 1..298 | 1324 | 79.2 | Plus |
Dmoj\GI23644-PA | 308 | GI23644-PA | 36..308 | 26..298 | 455 | 34.3 | Plus |
Dmoj\GI21233-PA | 313 | GI21233-PA | 30..313 | 17..298 | 347 | 30.4 | Plus |
Dmoj\GI16717-PA | 308 | GI16717-PA | 37..308 | 27..298 | 343 | 30.9 | Plus |
Dmoj\GI21234-PA | 308 | GI21234-PA | 25..308 | 17..298 | 338 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23532-PA | 298 | GL23532-PA | 1..298 | 1..298 | 1393 | 84.2 | Plus |
Dper\GL22169-PA | 308 | GL22169-PA | 36..308 | 26..298 | 425 | 33.6 | Plus |
Dper\GL17330-PA | 311 | GL17330-PA | 39..311 | 27..298 | 345 | 31 | Plus |
Dper\GL17331-PA | 308 | GL17331-PA | 35..308 | 26..298 | 323 | 30.1 | Plus |
Dper\GL16163-PA | 311 | GL16163-PA | 13..311 | 3..298 | 305 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11062-PA | 298 | GA11062-PA | 1..298 | 1..298 | 1388 | 83.9 | Plus |
Dpse\GA15415-PA | 308 | GA15415-PA | 36..308 | 26..298 | 425 | 33.6 | Plus |
Dpse\GA11913-PA | 311 | GA11913-PA | 39..311 | 27..298 | 349 | 31 | Plus |
Dpse\GA15770-PA | 308 | GA15770-PA | 35..308 | 26..298 | 324 | 29.7 | Plus |
Dpse\GA28527-PA | 311 | GA28527-PA | 18..311 | 8..298 | 309 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16424-PA | 298 | GM16424-PA | 1..298 | 1..298 | 1588 | 99 | Plus |
Dsec\GM10638-PA | 308 | GM10638-PA | 36..308 | 26..298 | 451 | 33.2 | Plus |
Dsec\GM20588-PA | 313 | GM20588-PA | 22..313 | 8..298 | 367 | 31 | Plus |
Dsec\GM12480-PA | 295 | GM12480-PA | 22..295 | 26..298 | 337 | 27.1 | Plus |
Dsec\GM20589-PA | 308 | GM20589-PA | 23..308 | 15..298 | 328 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16370-PA | 298 | GD16370-PA | 1..298 | 1..298 | 1588 | 99 | Plus |
Dsim\GD19620-PA | 308 | GD19620-PA | 36..308 | 26..298 | 451 | 33.2 | Plus |
Dsim\GD13840-PA | 311 | GD13840-PA | 17..311 | 7..298 | 324 | 28.2 | Plus |
Dsim\GD10061-PA | 308 | GD10061-PA | 23..308 | 15..298 | 320 | 30.8 | Plus |
Dsim\GD16379-PA | 303 | GD16379-PA | 32..262 | 27..239 | 306 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24121-PA | 298 | GJ24121-PA | 1..298 | 1..298 | 1299 | 78.2 | Plus |
Dvir\GJ24720-PA | 307 | GJ24720-PA | 35..307 | 26..298 | 452 | 33.9 | Plus |
Dvir\GJ12461-PA | 308 | GJ12461-PA | 13..308 | 3..298 | 363 | 29.3 | Plus |
Dvir\GJ20838-PA | 316 | GJ20838-PA | 24..316 | 7..298 | 355 | 30.2 | Plus |
Dvir\GJ12135-PA | 310 | GJ12135-PA | 12..310 | 3..298 | 331 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10975-PA | 298 | GK10975-PA | 1..298 | 1..298 | 1388 | 84.2 | Plus |
Dwil\GK22841-PA | 306 | GK22841-PA | 34..306 | 26..298 | 456 | 33.9 | Plus |
Dwil\GK15622-PA | 313 | GK15622-PA | 41..313 | 27..298 | 368 | 31.6 | Plus |
Dwil\GK11682-PA | 311 | GK11682-PA | 24..311 | 14..298 | 344 | 31.4 | Plus |
Dwil\GK15623-PA | 309 | GK15623-PA | 36..309 | 26..298 | 342 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23308-PA | 298 | GE23308-PA | 1..298 | 1..298 | 1562 | 97 | Plus |
Dyak\GE25285-PA | 308 | GE25285-PA | 36..308 | 26..298 | 450 | 33.2 | Plus |
Dyak\GE22148-PA | 313 | GE22148-PA | 22..313 | 8..298 | 365 | 31 | Plus |
Dyak\GE16743-PA | 295 | GE16743-PA | 22..295 | 26..298 | 343 | 27.8 | Plus |
Dyak\GE21443-PA | 311 | GE21443-PA | 17..311 | 7..298 | 338 | 28.2 | Plus |