Clone RT01013 Report

Search the DGRC for RT01013

Clone and Library Details

Library:RT
Tissue Source:D melanogaster pooled RNA
Created by:
Date Registered:2006-04-14
Comments:TA cloning vector from Invitrogen
Original Plate Number:10
Well:13
Vector:pCR2.1
Associated Gene/TranscriptCG6808-RA
Protein status:RT01013.pep: gold
Sequenced Size:1144

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6808 2006-05-19 RT target
CG6808 2008-04-29 Release 5.5 accounting
CG6808 2008-08-15 Release 5.9 accounting
CG6808 2008-12-18 5.12 accounting

Clone Sequence Records

RT01013.complete Sequence

1144 bp (1144 high quality bases) assembled on 2008-07-28

GenBank Submission: BT029143

> RT01013.complete
ATGGAAATCAGCATTAAATGGAGCATGTGCCGCACTTGCCGCAAAAAAGG
AACGCAATCCACGCTGCAGTCGCTCTTCGAGTCCAATGCCCACAAGCTGT
TGATCTCGTATGCCGGCACATCTGTGAAACCGGATGATGGACTGCCGGAT
CAAATTTGCACAGTCTGCTTGATGCAACTGGAGGAGGTGGACAGATTTCT
TAGCGCGTGCAAACAATCCGACGCGCACCTGAGAAGCCTCGTTCGTCAAA
CTCTGTCCTCCGCATCGGCATTTGAGACGCTGGAGGATAAGGACCAGCTT
GAACAGAAAAAACGCGCCAGGAAGCAGAACATTTCGGGGAGACTCATCGA
AGAGAATCCTATTAACTTTAAGACTCAAGAGAATGCATTGGAAACGACCA
AAGATGATGAAATCTTACCCATAAATAAATTTTCAAGCGATTTCGTGTTC
GATCTCAACGTGAATGCGGAAAACGAGAAAGACATACACCAGGAGGACTA
TACCATCAGTGATATGGATTTGGACAGGGAGATCTCCGATCAAAATTACT
CCGAAACGTATTCGCAAGAAAGCAGCGCTGCTACGGACAGTATTCAAGAG
ACAAGCGAGGATTACCATAATCTAGAGCCAAGTGCCGACTACGTGATAGA
TCTAGGAGTGGCCTGCGAGCCGGACAAGTACAGATGCAAGATCTGCAGCA
ATACATACCGCTGCTTATCTCAGCTAAATGCACACTCGCAGGTGCACCGC
AAGGAAAAGGACCACCAGTGCGAGGTTTGCCAAAAGACATTCAGAGCCGC
CTGCAACCTGAAAACACACATGCGGACGCACACGGGCGAGAAACCTTACC
AATGTTGCTACTGTTCGCGCCGTTTTGCCGACAACAGCACTCATCGCAAG
CACGAACGTTTGCACACGAATGAAAGACCCTATGCTTGCAACATATGTGG
AAAAACATTCTCTCTGTCCTCCTCTCGTAACGCTCACTACTACCTGCATT
CGTCTGAAAAGTCTCACAAGTGTCTTATGTGTAAAAAAGAATTTCGGCTT
AAGCACCAACTTACAGCGCACGAGAAGTCTCTTGCGCACCGTCTGATAGC
TAAGGAGTACAGCGACGTGGTAGAATAGAAGCTTTATCGACCAT

RT01013.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:02:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG6808-RA 3138 CG6808-RA 1752..2879 1..1128 5640 100 Plus
CG14710.a 1576 CG14710.a 1487..1576 1128..1039 450 100 Minus
CG14710-RB 1576 CG14710-RB 1487..1576 1128..1039 450 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:54:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 7447721..7448371 774..124 3165 99.1 Minus
chr3R 27901430 chr3R 7447240..7447460 1128..908 1090 99.5 Minus
chr3R 27901430 chr3R 7447530..7447664 908..774 660 99.3 Minus
chr3R 27901430 chr3R 7448426..7448552 127..1 620 99.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:39:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:54:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11622206..11622856 774..124 3255 100 Minus
3R 32079331 3R 11621725..11621945 1128..908 1105 100 Minus
3R 32079331 3R 11622015..11622149 908..774 675 100 Minus
3R 32079331 3R 11622911..11623037 127..1 635 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:20:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 11363037..11363687 774..124 3255 100 Minus
3R 31820162 3R 11362556..11362776 1128..908 1105 100 Minus
3R 31820162 3R 11362846..11362980 908..774 675 100 Minus
3R 31820162 3R 11363742..11363868 127..1 635 100 Minus
Blast to na_te.dros performed 2019-03-15 16:54:29
Subject Length Description Subject Range Query Range Score Percent Strand
hopper2 1593 hopper2 HOPPER2 1593bp 937..1030 952..1045 110 57.4 Plus

RT01013.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:55:28 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 7447238..7447459 909..1134 97 <- Minus
chr3R 7447530..7447664 774..908 99 <- Minus
chr3R 7447722..7448371 124..773 99 <- Minus
chr3R 7448430..7448552 1..123 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:54:38 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
CG6808-RA 1..1128 1..1128 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:03:17 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
CG6808-RA 1..1128 1..1128 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:24:13 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
CG6808-RA 1..1128 1..1128 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-11-04 14:44:20 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
CG6808-RA 1..1128 1..1128 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:20:49 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
CG6808-RA 1..1128 1..1128 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:22:51 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
CG6808-RA 1752..2881 1..1134 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:03:17 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
CG6808-RA 1752..2881 1..1134 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:24:13 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
CG6808-RA 1752..2881 1..1134 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-11-04 14:44:19 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
CG6808-RA 1752..2881 1..1134 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:20:49 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
CG6808-RA 1752..2881 1..1134 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:55:28 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11622915..11623037 1..123 100   Minus
3R 11621723..11621944 909..1134 98 <- Minus
3R 11622015..11622149 774..908 100 <- Minus
3R 11622207..11622856 124..773 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:55:28 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11622915..11623037 1..123 100   Minus
3R 11621723..11621944 909..1134 98 <- Minus
3R 11622015..11622149 774..908 100 <- Minus
3R 11622207..11622856 124..773 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:55:28 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11622915..11623037 1..123 100   Minus
3R 11621723..11621944 909..1134 98 <- Minus
3R 11622015..11622149 774..908 100 <- Minus
3R 11622207..11622856 124..773 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:24:13 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7447445..7447666 909..1134 98 <- Minus
arm_3R 7447737..7447871 774..908 100 <- Minus
arm_3R 7447929..7448578 124..773 100 <- Minus
arm_3R 7448637..7448759 1..123 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:31:20 Download gff for RT01013.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11362554..11362775 909..1134 98 <- Minus
3R 11362846..11362980 774..908 100 <- Minus
3R 11363038..11363687 124..773 100 <- Minus
3R 11363746..11363868 1..123 100   Minus

RT01013.pep Sequence

Translation from 0 to 1127

> RT01013.pep
MEISIKWSMCRTCRKKGTQSTLQSLFESNAHKLLISYAGTSVKPDDGLPD
QICTVCLMQLEEVDRFLSACKQSDAHLRSLVRQTLSSASAFETLEDKDQL
EQKKRARKQNISGRLIEENPINFKTQENALETTKDDEILPINKFSSDFVF
DLNVNAENEKDIHQEDYTISDMDLDREISDQNYSETYSQESSAATDSIQE
TSEDYHNLEPSADYVIDLGVACEPDKYRCKICSNTYRCLSQLNAHSQVHR
KEKDHQCEVCQKTFRAACNLKTHMRTHTGEKPYQCCYCSRRFADNSTHRK
HERLHTNERPYACNICGKTFSLSSSRNAHYYLHSSEKSHKCLMCKKEFRL
KHQLTAHEKSLAHRLIAKEYSDVVE*

RT01013.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:03:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16633-PA 387 GF16633-PA 1..384 1..374 921 52.2 Plus
Dana\GF18381-PA 429 GF18381-PA 272..413 223..364 388 47.9 Plus
Dana\GF18382-PA 383 GF18382-PA 3..371 6..370 360 28.2 Plus
Dana\GF17340-PA 324 GF17340-PA 126..305 185..363 349 40.2 Plus
Dana\GF17633-PA 299 GF17633-PA 145..297 216..360 337 43.1 Plus
Dana\GF17633-PA 299 GF17633-PA 220..298 227..305 148 34.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17210-PA 375 GG17210-PA 1..375 1..375 1617 80.5 Plus
Dere\GG18266-PA 415 GG18266-PA 260..399 225..364 371 48.6 Plus
Dere\GG18277-PA 381 GG18277-PA 3..371 6..372 358 28.7 Plus
Dere\GG23680-PA 323 GG23680-PA 179..312 227..360 346 47.8 Plus
Dere\GG17429-PA 418 GG17429-PA 11..388 8..364 344 27.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:03:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19509-PA 437 GH19509-PA 1..419 1..364 705 40.4 Plus
Dgri\GH18110-PA 433 GH18110-PA 271..412 223..364 377 48.6 Plus
Dgri\GH18111-PA 383 GH18111-PA 230..369 229..368 365 47.1 Plus
Dgri\GH17279-PA 474 GH17279-PA 312..453 226..367 348 44.4 Plus
Dgri\GH19016-PA 442 GH19016-PA 3..415 2..370 342 27 Plus
Dgri\GH18111-PA 383 GH18111-PA 256..371 227..342 197 33.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG6808-PB 375 CG6808-PB 1..375 1..375 1995 100 Plus
CG6808-PA 375 CG6808-PA 1..375 1..375 1995 100 Plus
trem-PA 439 CG4413-PA 4..410 2..365 408 27 Plus
CG14710-PB 415 CG14710-PB 10..399 10..364 398 29.9 Plus
CG4854-PA 319 CG4854-PA 12..311 10..360 386 28.4 Plus
M1BP-PA 418 CG9797-PA 11..388 8..364 386 28.1 Plus
CG14711-PA 377 CG14711-PA 3..363 6..364 380 27.5 Plus
CG9215-PA 560 CG9215-PA 64..435 49..357 380 28.2 Plus
CG4424-PA 345 CG4424-PA 189..323 229..363 367 47.4 Plus
ranshi-PA 346 CG9793-PA 5..333 9..364 366 28.5 Plus
CG4936-PA 521 CG4936-PA 359..490 226..357 355 46.2 Plus
Zif-PC 388 CG10267-PC 1..360 1..364 333 24.5 Plus
Zif-PB 388 CG10267-PB 1..360 1..364 333 24.5 Plus
Zif-PA 388 CG10267-PA 1..360 1..364 333 24.5 Plus
Kr-PB 502 CG3340-PB 210..353 218..358 329 41.7 Plus
Kr-PA 502 CG3340-PA 210..353 218..358 329 41.7 Plus
CG31441-PA 341 CG31441-PA 6..332 8..364 328 25.1 Plus
CG44002-PA 345 CG44002-PA 5..332 10..359 321 25.1 Plus
Meics-PB 571 CG8474-PB 9..421 1..360 314 25.4 Plus
gl-PA 604 CG7672-PA 409..567 191..357 313 37.1 Plus
gl-PC 679 CG7672-PC 409..567 191..357 313 37.1 Plus
nom-PB 370 CG8145-PB 4..320 8..364 306 25.5 Plus
nom-PC 370 CG8145-PC 4..320 8..364 306 25.5 Plus
nom-PA 370 CG8145-PA 4..320 8..364 306 25.5 Plus
gl-PB 557 CG7672-PB 409..554 191..344 305 38.3 Plus
CG15436-PA 346 CG15436-PA 92..286 162..359 302 30.3 Plus
CG8159-PB 399 CG8159-PB 4..329 8..364 300 26.7 Plus
Kr-h1-PA 791 CG45074-PA 273..413 227..365 296 36.9 Plus
Kr-h1-PB 845 CG45074-PB 327..467 227..365 296 36.9 Plus
su(Hw)-PC 941 CG8573-PC 296..544 120..360 296 30.4 Plus
su(Hw)-PB 941 CG8573-PB 296..544 120..360 296 30.4 Plus
su(Hw)-PA 941 CG8573-PA 296..544 120..360 296 30.4 Plus
CG15436-PA 346 CG15436-PA 98..259 200..360 295 37 Plus
Clamp-PA 561 CG1832-PA 388..518 227..357 295 38.9 Plus
Clamp-PB 566 CG1832-PB 393..523 227..357 295 38.9 Plus
Aef1-PB 308 CG5683-PB 175..304 219..347 294 40.8 Plus
Aef1-PC 308 CG5683-PC 175..304 219..347 294 40.8 Plus
Aef1-PA 308 CG5683-PA 175..304 219..347 294 40.8 Plus
Aef1-PD 454 CG5683-PD 175..304 219..347 294 40.8 Plus
Meics-PA 583 CG8474-PA 300..433 227..360 294 37.3 Plus
CG15269-PA 587 CG15269-PA 357..485 229..357 294 37.2 Plus
CG6654-PA 639 CG6654-PA 464..598 223..357 294 34.8 Plus
CG8319-PA 383 CG8319-PA 4..368 9..357 292 24 Plus
Meics-PA 583 CG8474-PA 9..402 1..357 292 25.4 Plus
Kr-h1-PA 791 CG45074-PA 210..352 220..360 291 37.8 Plus
Kr-h1-PB 845 CG45074-PB 264..406 220..360 291 37.8 Plus
sens-2-PB 746 CG31632-PB 536..669 227..360 291 37.3 Plus
sens-2-PA 746 CG31632-PA 536..669 227..360 291 37.3 Plus
Clamp-PA 561 CG1832-PA 360..492 227..359 286 37.6 Plus
Clamp-PB 566 CG1832-PB 365..497 227..359 286 37.6 Plus
CG17328-PB 382 CG17328-PB 116..263 227..375 286 33.6 Plus
CG17328-PA 413 CG17328-PA 147..294 227..375 286 33.6 Plus
CG15436-PA 346 CG15436-PA 210..340 227..357 283 36.6 Plus
ouib-PA 312 CG11762-PA 155..303 215..363 283 32.2 Plus
CG2712-PA 501 CG2712-PA 312..443 227..357 282 36.4 Plus
dwg-PA 592 CG2711-PA 14..438 10..360 281 24.2 Plus
dwg-PA 592 CG2711-PA 361..491 227..357 281 36.6 Plus
CG18764-PA 409 CG18764-PA 5..400 10..368 277 24 Plus
sens-2-PB 746 CG31632-PB 505..640 225..359 276 37.5 Plus
sens-2-PA 746 CG31632-PA 505..640 225..359 276 37.5 Plus
Neu2-PB 308 CG7204-PB 69..257 176..365 274 30 Plus
gl-PA 604 CG7672-PA 465..576 227..338 273 39.3 Plus
gl-PC 679 CG7672-PC 465..576 227..338 273 39.3 Plus
CG2712-PA 501 CG2712-PA 291..474 176..360 273 32.3 Plus
Meics-PB 571 CG8474-PB 344..474 227..357 268 35.1 Plus
Meics-PA 583 CG8474-PA 356..486 227..357 268 35.1 Plus
Aef1-PB 308 CG5683-PB 177..288 248..359 266 42 Plus
Aef1-PC 308 CG5683-PC 177..288 248..359 266 42 Plus
Aef1-PA 308 CG5683-PA 177..288 248..359 266 42 Plus
Aef1-PD 454 CG5683-PD 177..288 248..359 266 42 Plus
CG15269-PA 587 CG15269-PA 382..522 226..364 265 34.8 Plus
CG15436-PA 346 CG15436-PA 182..313 227..358 264 34.8 Plus
CG6654-PA 639 CG6654-PA 442..573 229..360 263 34.1 Plus
Meics-PB 571 CG8474-PB 368..507 223..360 262 32.9 Plus
Meics-PA 583 CG8474-PA 380..519 223..360 262 32.9 Plus
gl-PB 557 CG7672-PB 435..539 253..357 254 41.9 Plus
CG15269-PA 587 CG15269-PA 324..459 226..359 247 33.8 Plus
CG15269-PA 587 CG15269-PA 292..432 221..360 235 31.7 Plus
Meics-PB 571 CG8474-PB 312..446 223..357 231 33.3 Plus
Meics-PA 583 CG8474-PA 324..458 223..357 231 33.3 Plus
CG6654-PA 639 CG6654-PA 413..545 228..360 228 30.1 Plus
CG4424-PA 345 CG4424-PA 1..317 1..329 226 24.2 Plus
Meics-PB 571 CG8474-PB 399..536 226..357 226 32.6 Plus
Meics-PA 583 CG8474-PA 411..548 226..357 226 32.6 Plus
CG6654-PA 639 CG6654-PA 383..516 227..359 225 29.9 Plus
CG2712-PA 501 CG2712-PA 258..416 190..359 215 27.6 Plus
CG6654-PA 639 CG6654-PA 496..619 227..347 213 31.5 Plus
CG4936-PA 521 CG4936-PA 355..463 250..358 212 33 Plus
CG2712-PA 501 CG2712-PA 368..482 227..340 209 33.9 Plus
Clamp-PA 561 CG1832-PA 416..522 227..333 208 33.6 Plus
Clamp-PB 566 CG1832-PB 421..527 227..333 208 33.6 Plus
Clamp-PA 561 CG1832-PA 358..464 253..359 198 35.5 Plus
Clamp-PB 566 CG1832-PB 363..469 253..359 198 35.5 Plus
dwg-PA 592 CG2711-PA 417..526 227..336 192 31.8 Plus
Neu2-PB 308 CG7204-PB 175..295 227..342 186 33.6 Plus
CG15269-PA 587 CG15269-PA 285..401 242..357 166 25.4 Plus
dwg-PA 592 CG2711-PA 445..533 227..315 165 33.7 Plus
gl-PA 604 CG7672-PA 435..514 281..360 160 35 Plus
gl-PC 679 CG7672-PC 435..514 281..360 160 35 Plus
gl-PB 557 CG7672-PB 435..514 281..360 160 35 Plus
CG9215-PA 560 CG9215-PA 361..502 227..370 158 26.4 Plus
Clamp-PA 561 CG1832-PA 351..437 274..360 156 32.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:03:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22986-PA 386 GI22986-PA 1..368 9..364 734 43.4 Plus
Dmoj\GI24611-PA 417 GI24611-PA 261..399 226..364 370 48.2 Plus
Dmoj\GI24612-PA 380 GI24612-PA 45..366 42..368 365 28.9 Plus
Dmoj\GI15637-PA 587 GI15637-PA 292..420 229..357 345 45.7 Plus
Dmoj\GI22443-PA 453 GI22443-PA 291..422 226..357 344 47 Plus
Dmoj\GI15637-PA 587 GI15637-PA 292..394 257..359 212 35 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:03:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21708-PA 329 GL21708-PA 1..324 1..366 484 35.3 Plus
Dper\GL22112-PA 374 GL22112-PA 215..356 223..364 372 47.2 Plus
Dper\GL12084-PA 333 GL12084-PA 6..318 8..365 357 28.8 Plus
Dper\GL12521-PA 328 GL12521-PA 170..307 227..364 348 45.7 Plus
Dper\GL22111-PA 571 GL22111-PA 423..555 224..356 347 45.9 Plus
Dper\GL12521-PA 328 GL12521-PA 1..300 1..329 213 23.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:03:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19875-PA 384 GA19875-PA 1..381 1..372 823 47.2 Plus
Dpse\GA13192-PA 410 GA13192-PA 255..395 224..364 374 46.1 Plus
Dpse\GA13193-PA 374 GA13193-PA 215..356 223..364 371 47.2 Plus
Dpse\GA18481-PA 333 GA18481-PA 74..318 141..365 362 35.3 Plus
Dpse\GA18174-PA 329 GA18174-PA 171..308 227..364 348 45.7 Plus
Dpse\GA13193-PA 374 GA13193-PA 247..370 227..350 202 32.3 Plus
Dpse\GA18174-PA 329 GA18174-PA 1..295 1..295 178 24.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:03:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26089-PA 374 GM26089-PA 1..374 1..375 1737 88.5 Plus
Dsec\GM17691-PA 426 GM17691-PA 17..395 6..357 370 27.9 Plus
Dsec\GM23957-PA 415 GM23957-PA 260..399 225..364 368 47.9 Plus
Dsec\GM17699-PA 342 GM17699-PA 1..320 1..363 358 30.4 Plus
Dsec\GM17698-PA 434 GM17698-PA 8..405 6..360 357 27.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:03:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20652-PA 374 GD20652-PA 1..374 1..375 1739 88.8 Plus
Dsim\GD18767-PA 415 GD18767-PA 260..399 225..364 367 47.9 Plus
Dsim\GD18768-PA 377 GD18768-PA 228..363 229..364 347 46.3 Plus
Dsim\GD15791-PA 574 GD15791-PA 316..444 229..357 344 46.5 Plus
Dsim\GD19333-PA 323 GD19333-PA 179..312 227..360 336 46.3 Plus
Dsim\GD15791-PA 574 GD15791-PA 316..419 257..360 222 38.5 Plus
Dsim\GD18768-PA 377 GD18768-PA 254..348 227..321 201 37.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:03:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24683-PA 461 GJ24683-PA 288..443 212..364 538 60.9 Plus
Dvir\GJ22561-PA 425 GJ22561-PA 264..404 224..364 372 48.2 Plus
Dvir\GJ22562-PA 378 GJ22562-PA 225..360 229..364 365 48.5 Plus
Dvir\GJ11005-PA 479 GJ11005-PA 317..448 226..357 340 47 Plus
Dvir\GJ10170-PA 332 GJ10170-PA 152..305 208..363 336 42.3 Plus
Dvir\GJ24683-PA 461 GJ24683-PA 1..167 1..162 266 39.4 Plus
Dvir\GJ22562-PA 378 GJ22562-PA 251..345 227..321 195 37.9 Plus
Dvir\GJ11005-PA 479 GJ11005-PA 313..421 250..358 191 32.1 Plus
Dvir\GJ11005-PA 479 GJ11005-PA 11..383 6..348 156 22 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:03:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22769-PA 370 GK22769-PA 8..364 10..371 370 30.5 Plus
Dwil\GK11845-PA 385 GK11845-PA 235..370 229..364 359 47.8 Plus
Dwil\GK20036-PA 568 GK20036-PA 295..423 229..357 348 47.3 Plus
Dwil\GK22369-PA 303 GK22369-PA 6..292 8..360 342 26.8 Plus
Dwil\GK22797-PA 346 GK22797-PA 10..323 8..363 340 27.9 Plus
Dwil\GK20036-PA 568 GK20036-PA 295..398 257..360 218 35.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:03:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10103-PA 373 GE10103-PA 1..373 1..375 1555 78.5 Plus
Dyak\GE25643-PA 338 GE25643-PA 19..327 6..360 381 29.4 Plus
Dyak\GE24184-PA 413 GE24184-PA 258..397 225..364 377 49.3 Plus
Dyak\GE25094-PA 441 GE25094-PA 8..416 6..365 369 28.4 Plus
Dyak\GE25642-PA 323 GE25642-PA 39..312 38..360 359 30.6 Plus

RT01013.hyp Sequence

Translation from 1 to 1127

> RT01013.hyp
MEISIKWSMCRTCRKKGTQSTLQSLFESNAHKLLISYAGTSVKPDDGLPD
QICTVCLMQLEEVDRFLSACKQSDAHLRSLVRQTLSSASAFETLEDKDQL
EQKKRARKQNISGRLIEENPINFKTQENALETTKDDEILPINKFSSDFVF
DLNVNAENEKDIHQEDYTISDMDLDREISDQNYSETYSQESSAATDSIQE
TSEDYHNLEPSADYVIDLGVACEPDKYRCKICSNTYRCLSQLNAHSQVHR
KEKDHQCEVCQKTFRAACNLKTHMRTHTGEKPYQCCYCSRRFADNSTHRK
HERLHTNERPYACNICGKTFSLSSSRNAHYYLHSSEKSHKCLMCKKEFRL
KHQLTAHEKSLAHRLIAKEYSDVVE*

RT01013.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:15:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG6808-PB 375 CG6808-PB 1..375 1..375 1995 100 Plus
CG6808-PA 375 CG6808-PA 1..375 1..375 1995 100 Plus
trem-PA 439 CG4413-PA 4..410 2..365 408 27 Plus
CG14710-PB 415 CG14710-PB 10..399 10..364 398 29.9 Plus
CG4854-PA 319 CG4854-PA 12..311 10..360 386 28.4 Plus