BDGP Sequence Production Resources |
Search the DGRC for RT02919
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 29 |
Well: | 19 |
Vector: | pCR2.1 |
Associated Gene/Transcript | TwdlO-RA |
Protein status: | RT02919.pep: gold |
Sequenced Size: | 717 |
717 bp assembled on 2010-02-26
GenBank Submission: BT100067.3
> RT02919.complete ATGCGTTTCCTCATCGCTTTCTGCCTGATTGGTGCCGCATGCGCCCAGTA CAACTACGGAGCGGGATTTACCGGAGCCGCCTCCGATAATGTTCCCAGTT ACTCCGGAAGCAGTGTTGGCGACTCCTACGATGGTGCTGCCAGCAGCCCG GACTACTCGGTCTCCAGCGAACTGAACAAGGAGTACTACACCTTCGAGGC TGACGAGAGCCAGTTCGAGGATCCTCTGGCCGCCCAGAAGATCGCCGGCT CCGTGAACAAGGGACTCCGCGTGGTCTTCATCAAGGGACCCGAAAACCGT GGCCTGGAGAACGCTGCTCTGGCCCTCGCCAAGCAGGCTGCCGAGCAGAG GACCGCCATCTATGTCTTGAACAAGCAGACCGACATTGGAGATCTGGCCC AGAAATTCAATGCCGCCCGCCAGAACTCCAACCAGCGTCCTGAGGTGCAC TTCGTCAAGTACAGGACTCCCGAGGATGCGGCCAATGCCCAGCGTGCCAT CCAGTCGCAGTACGATAACCTGGGAGGATCCAGCCAGTCCATCAACGGAG GAGTTGCCAACGCCATCAACTTCGCCTCCGCTGCCCCCGTGGTTCCCGCT CGTCGTGGCCCCAACTACTCCCCACCAGCCGCCGCCACGAGCAACTCCTA CCTGCCCGCCAACATCCTGCGTCGCCTGCGCATCCGTTAACACTTCTATA GTGTCACCTAAATTCGC
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TwdlO-RA | 690 | TwdlO-RA | 1..690 | 1..690 | 3450 | 100 | Plus |
TwdlN-RA | 1086 | TwdlN-RA | 563..910 | 244..591 | 975 | 85.3 | Plus |
TwdlL-RB | 1073 | TwdlL-RB | 562..717 | 250..405 | 570 | 91 | Plus |
TwdlL-RB | 1073 | TwdlL-RB | 754..902 | 442..590 | 370 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 22449124..22449813 | 690..1 | 3405 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 22455550..22455897 | 244..591 | 975 | 85.3 | Plus |
chr3R | 27901430 | chr3R | 22447869..22448209 | 590..250 | 865 | 83.6 | Minus |
chr3R | 27901430 | chr3R | 22442828..22443165 | 254..591 | 835 | 83.1 | Plus |
chr3R | 27901430 | chr3R | 22445762..22446102 | 590..250 | 820 | 82.7 | Minus |
chr3R | 27901430 | chr3R | 22453408..22453687 | 251..530 | 695 | 83.2 | Plus |
chr3R | 27901430 | chr3R | 22451186..22451493 | 558..251 | 685 | 81.5 | Minus |
chr3R | 27901430 | chr3R | 22443873..22444184 | 579..268 | 645 | 80.4 | Minus |
chr3R | 27901430 | chr3R | 22457278..22457564 | 245..531 | 520 | 78.7 | Plus |
chr3R | 27901430 | chr3R | 22480047..22480160 | 265..378 | 285 | 83.3 | Plus |
chr3R | 27901430 | chr3R | 22463765..22463827 | 442..504 | 210 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 26626008..26626697 | 690..1 | 3450 | 100 | Minus |
3R | 32079331 | 3R | 26632435..26632782 | 244..591 | 975 | 85.3 | Plus |
3R | 32079331 | 3R | 26624751..26625091 | 590..250 | 880 | 83.9 | Minus |
3R | 32079331 | 3R | 26619707..26620044 | 254..591 | 820 | 82.8 | Plus |
3R | 32079331 | 3R | 26622641..26622981 | 590..250 | 820 | 82.7 | Minus |
3R | 32079331 | 3R | 26628051..26628379 | 579..251 | 730 | 81.5 | Minus |
3R | 32079331 | 3R | 26630293..26630572 | 251..530 | 710 | 83.6 | Plus |
3R | 32079331 | 3R | 26620752..26621063 | 579..268 | 645 | 80.4 | Minus |
3R | 32079331 | 3R | 26634164..26634450 | 245..531 | 520 | 78.7 | Plus |
3R | 32079331 | 3R | 26656944..26657057 | 265..378 | 285 | 83.3 | Plus |
3R | 32079331 | 3R | 26640644..26640706 | 442..504 | 210 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 26366839..26367528 | 690..1 | 3450 | 100 | Minus |
3R | 31820162 | 3R | 26373266..26373613 | 244..591 | 975 | 85.3 | Plus |
3R | 31820162 | 3R | 26363531..26363812 | 531..250 | 810 | 85.8 | Minus |
3R | 31820162 | 3R | 26361583..26361894 | 579..268 | 645 | 80.4 | Minus |
3R | 31820162 | 3R | 26365767..26365922 | 405..250 | 570 | 91 | Minus |
3R | 31820162 | 3R | 26360538..26360683 | 254..399 | 535 | 91 | Plus |
3R | 31820162 | 3R | 26371124..26371272 | 251..399 | 535 | 90.6 | Plus |
3R | 31820162 | 3R | 26369062..26369210 | 399..251 | 475 | 87.9 | Minus |
3R | 31820162 | 3R | 26374995..26375146 | 245..396 | 415 | 84.8 | Plus |
3R | 31820162 | 3R | 26365582..26365730 | 590..442 | 370 | 83.2 | Minus |
3R | 31820162 | 3R | 26360726..26360875 | 442..591 | 360 | 82.6 | Plus |
3R | 31820162 | 3R | 26368882..26369019 | 579..442 | 330 | 82.6 | Minus |
3R | 31820162 | 3R | 26397775..26397888 | 265..378 | 285 | 83.3 | Plus |
3R | 31820162 | 3R | 26371315..26371403 | 442..530 | 250 | 85.3 | Plus |
3R | 31820162 | 3R | 26375192..26375281 | 442..531 | 210 | 82.2 | Plus |
3R | 31820162 | 3R | 26381475..26381537 | 442..504 | 210 | 88.8 | Plus |
3R | 31820162 | 3R | 26371569..26371604 | 645..680 | 150 | 94.4 | Plus |
3R | 31820162 | 3R | 26397952..26398061 | 442..551 | 145 | 75.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 22449124..22449813 | 1..690 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TwdlO-RA | 1..690 | 1..690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TwdlO-RA | 1..690 | 1..690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TwdlO-RA | 1..690 | 1..690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TwdlO-RA | 1..690 | 1..690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TwdlO-RA | 1..690 | 1..690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TwdlO-RA | 1..690 | 1..690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TwdlO-RA | 42..731 | 1..690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TwdlO-RA | 42..731 | 1..690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26626008..26626697 | 1..690 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26626008..26626697 | 1..690 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26626008..26626697 | 1..690 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 22451730..22452419 | 1..690 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26366839..26367528 | 1..690 | 100 | Minus |
Translation from 0 to 689
> RT02919.pep MRFLIAFCLIGAACAQYNYGAGFTGAASDNVPSYSGSSVGDSYDGAASSP DYSVSSELNKEYYTFEADESQFEDPLAAQKIAGSVNKGLRVVFIKGPENR GLENAALALAKQAAEQRTAIYVLNKQTDIGDLAQKFNAARQNSNQRPEVH FVKYRTPEDAANAQRAIQSQYDNLGGSSQSINGGVANAINFASAAPVVPA RRGPNYSPPAAATSNSYLPANILRRLRIR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18574-PA | 231 | GF18574-PA | 1..231 | 1..229 | 883 | 84.1 | Plus |
Dana\GF18577-PA | 228 | GF18577-PA | 1..227 | 1..227 | 589 | 59.8 | Plus |
Dana\GF16445-PA | 295 | GF16445-PA | 128..294 | 55..229 | 579 | 72 | Plus |
Dana\GF18576-PA | 281 | GF18576-PA | 116..281 | 55..228 | 544 | 67.8 | Plus |
Dana\GF16446-PA | 245 | GF16446-PA | 1..242 | 1..224 | 527 | 49.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12180-PA | 229 | GG12180-PA | 1..229 | 1..229 | 1136 | 96.1 | Plus |
Dere\GG12179-PA | 239 | GG12179-PA | 1..238 | 1..227 | 624 | 57.1 | Plus |
Dere\GG11489-PA | 274 | GG11489-PA | 63..274 | 37..228 | 596 | 62.9 | Plus |
Dere\GG11490-PA | 285 | GG11490-PA | 118..284 | 55..229 | 580 | 72.6 | Plus |
Dere\GG12183-PA | 220 | GG12183-PA | 1..219 | 1..227 | 558 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18877-PA | 228 | GH18877-PA | 1..228 | 1..229 | 710 | 69.4 | Plus |
Dgri\GH18876-PA | 232 | GH18876-PA | 1..232 | 1..228 | 623 | 56.1 | Plus |
Dgri\GH18727-PA | 296 | GH18727-PA | 129..295 | 55..229 | 580 | 74.3 | Plus |
Dgri\GH18726-PA | 286 | GH18726-PA | 7..286 | 4..228 | 560 | 48 | Plus |
Dgri\GH18880-PA | 223 | GH18880-PA | 1..222 | 1..227 | 539 | 54.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TwdlO-PA | 229 | CG6452-PA | 1..229 | 1..229 | 1162 | 100 | Plus |
TwdlN-PA | 309 | CG5476-PA | 106..308 | 20..229 | 643 | 63.8 | Plus |
TwdlK-PA | 247 | CG6460-PA | 1..247 | 1..228 | 619 | 53.9 | Plus |
TwdlP-PA | 220 | CG14240-PA | 1..219 | 1..227 | 612 | 60 | Plus |
TwdlJ-PB | 274 | CG5471-PB | 3..273 | 2..227 | 610 | 52.4 | Plus |
TwdlL-PB | 279 | CG6447-PB | 70..277 | 10..225 | 607 | 58.8 | Plus |
TwdlL-PA | 285 | CG6447-PA | 76..283 | 10..225 | 607 | 58.8 | Plus |
TwdlB-PA | 286 | CG6478-PA | 76..285 | 10..227 | 606 | 57.8 | Plus |
TwdlM-PA | 288 | CG5468-PA | 78..288 | 11..226 | 590 | 56.6 | Plus |
TwdlH-PA | 241 | CG31080-PA | 1..238 | 1..224 | 552 | 52 | Plus |
Tb-PA | 283 | CG5480-PA | 1..280 | 1..221 | 460 | 41.4 | Plus |
TwdlD-PA | 256 | CG14243-PA | 1..256 | 1..229 | 458 | 43.1 | Plus |
TwdlQ-PA | 245 | CG14250-PA | 7..243 | 4..224 | 423 | 41.4 | Plus |
TwdlR-PA | 325 | CG31081-PA | 40..226 | 31..220 | 315 | 39.1 | Plus |
TwdlX-PA | 346 | CG32571-PA | 89..272 | 18..185 | 235 | 34.4 | Plus |
TwdlW-PA | 308 | CG4060-PA | 140..256 | 66..186 | 225 | 45.5 | Plus |
TwdlG-PC | 278 | CG14643-PC | 143..276 | 87..222 | 223 | 40.6 | Plus |
TwdlG-PB | 278 | CG14643-PB | 143..276 | 87..222 | 223 | 40.6 | Plus |
TwdlG-PA | 278 | CG14643-PA | 143..276 | 87..222 | 223 | 40.6 | Plus |
TwdlY-PA | 247 | CG32570-PA | 43..243 | 20..220 | 216 | 30.3 | Plus |
TwdlF-PA | 354 | CG14639-PA | 151..279 | 66..195 | 214 | 37.1 | Plus |
TwdlV-PA | 251 | CG14640-PA | 1..250 | 1..221 | 202 | 29 | Plus |
Twdlalpha-PA | 388 | CG32574-PA | 109..301 | 11..188 | 193 | 29.9 | Plus |
TwdlS-PA | 228 | CG14242-PA | 40..181 | 51..199 | 186 | 34.2 | Plus |
TwdlZ-PB | 210 | CG32569-PB | 27..201 | 50..213 | 184 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24734-PA | 227 | GI24734-PA | 1..227 | 1..229 | 702 | 68.7 | Plus |
Dmoj\GI24737-PA | 231 | GI24737-PA | 1..228 | 1..227 | 603 | 54.9 | Plus |
Dmoj\GI22879-PA | 308 | GI22879-PA | 143..307 | 55..227 | 553 | 69.9 | Plus |
Dmoj\GI24735-PA | 315 | GI24735-PA | 152..315 | 55..226 | 514 | 64.5 | Plus |
Dmoj\GI24736-PA | 280 | GI24736-PA | 115..279 | 55..227 | 513 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24439-PA | 231 | GL24439-PA | 1..231 | 1..229 | 855 | 81 | Plus |
Dper\GL24787-PA | 213 | GL24787-PA | 1..213 | 1..229 | 815 | 76.7 | Plus |
Dper\GL23102-PA | 264 | GL23102-PA | 1..262 | 1..225 | 615 | 51.6 | Plus |
Dper\GL24443-PA | 277 | GL24443-PA | 113..276 | 58..227 | 604 | 71.2 | Plus |
Dper\GL23101-PA | 316 | GL23101-PA | 149..315 | 55..229 | 575 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19605-PA | 230 | GA19605-PA | 1..230 | 1..229 | 913 | 83.7 | Plus |
Dpse\GA12853-PA | 225 | GA12853-PA | 1..224 | 1..227 | 616 | 59.8 | Plus |
Dpse\GA27141-PA | 264 | GA27141-PA | 1..262 | 1..225 | 614 | 51.6 | Plus |
Dpse\GA18910-PA | 316 | GA18910-PA | 149..315 | 55..229 | 575 | 71.4 | Plus |
Dpse\GA26613-PA | 250 | GA26613-PA | 1..250 | 1..228 | 571 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10176-PA | 229 | GM10176-PA | 1..229 | 1..229 | 1178 | 99.1 | Plus |
Dsec\GM10332-PA | 280 | GM10332-PA | 113..279 | 55..229 | 579 | 72 | Plus |
Dsec\GM10179-PA | 220 | GM10179-PA | 1..219 | 1..227 | 564 | 59.6 | Plus |
Dsec\GM10175-PA | 247 | GM10175-PA | 1..247 | 1..228 | 555 | 53.9 | Plus |
Dsec\GM10331-PA | 274 | GM10331-PA | 63..274 | 37..228 | 538 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18128-PA | 229 | GD18128-PA | 1..229 | 1..229 | 1178 | 99.1 | Plus |
Dsim\GD21293-PA | 309 | GD21293-PA | 142..308 | 55..229 | 580 | 72 | Plus |
Dsim\GD18131-PA | 220 | GD18131-PA | 1..219 | 1..227 | 568 | 60 | Plus |
Dsim\GD18127-PA | 247 | GD18127-PA | 1..247 | 1..228 | 540 | 53.9 | Plus |
Dsim\GD21292-PA | 274 | GD21292-PA | 63..274 | 37..228 | 536 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14562-PA | 230 | GJ14562-PA | 1..230 | 1..229 | 754 | 70.7 | Plus |
Dvir\GJ14563-PA | 289 | GJ14563-PA | 126..289 | 55..226 | 571 | 66.3 | Plus |
Dvir\GJ14565-PA | 226 | GJ14565-PA | 1..224 | 1..227 | 569 | 57.8 | Plus |
Dvir\GJ14173-PA | 284 | GJ14173-PA | 1..284 | 1..228 | 540 | 47 | Plus |
Dvir\GJ14174-PA | 245 | GJ14174-PA | 1..244 | 1..229 | 534 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13960-PA | 229 | GK13960-PA | 1..229 | 1..229 | 866 | 78.9 | Plus |
Dwil\GK13964-PA | 225 | GK13964-PA | 1..224 | 1..229 | 619 | 59.5 | Plus |
Dwil\GK13322-PA | 298 | GK13322-PA | 131..297 | 55..229 | 566 | 70.9 | Plus |
Dwil\GK13963-PA | 283 | GK13963-PA | 118..283 | 55..228 | 541 | 67.8 | Plus |
Dwil\GK13320-PA | 284 | GK13320-PA | 121..284 | 55..226 | 520 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10624-PA | 229 | GE10624-PA | 1..229 | 1..229 | 1156 | 97.4 | Plus |
Dyak\GE23680-PA | 302 | GE23680-PA | 135..301 | 55..229 | 569 | 70.9 | Plus |
Dyak\GE10627-PA | 220 | GE10627-PA | 1..219 | 1..227 | 559 | 58.1 | Plus |
Dyak\GE10623-PA | 247 | GE10623-PA | 1..247 | 1..228 | 553 | 56.3 | Plus |
Dyak\GE23681-PA | 234 | GE23681-PA | 1..231 | 1..224 | 540 | 51.7 | Plus |
Translation from 1 to 689
> RT02919.hyp MRFLIAFCLIGAACAQYNYGAGFTGAASDNVPSYSGSSVGDSYDGAASSP DYSVSSELNKEYYTFEADESQFEDPLAAQKIAGSVNKGLRVVFIKGPENR GLENAALALAKQAAEQRTAIYVLNKQTDIGDLAQKFNAARQNSNQRPEVH FVKYRTPEDAANAQRAIQSQYDNLGGSSQSINGGVANAINFASAAPVVPA RRGPNYSPPAAATSNSYLPANILRRLRIR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TwdlO-PA | 229 | CG6452-PA | 1..229 | 1..229 | 1162 | 100 | Plus |
TwdlN-PA | 309 | CG5476-PA | 106..308 | 20..229 | 643 | 63.8 | Plus |
TwdlK-PA | 247 | CG6460-PA | 1..247 | 1..228 | 619 | 53.9 | Plus |
TwdlP-PA | 220 | CG14240-PA | 1..219 | 1..227 | 612 | 60 | Plus |
TwdlJ-PB | 274 | CG5471-PB | 3..273 | 2..227 | 610 | 52.4 | Plus |