BDGP Sequence Production Resources |
Search the DGRC for RT02937
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 29 |
Well: | 37 |
Vector: | pCR2.1 |
Associated Gene/Transcript | yellow-k-RA |
Protein status: | RT02937.pep: gold |
Sequenced Size: | 1056 |
1056 bp assembled on 2010-02-26
GenBank Submission: BT100075.3
> RT02937.complete ATGGTCACACATGGTGTCCTCGGCTTGGGATTTCTCATTGTTGGTCTAAT TCTGGCCACGGACGCCTGGCTGTTATCCGAATCTGGTTTAAACGAATCCA GCTACAAAGTCCGTCATCTATCGATGCACTTTTCGCGAGTGTTTCTCAGC GTAAATGTAGAAAGCAACGATGCGCCCACTTTGATCGAGGCGCAATGGCC GGTTTCCTATTTTCCCATGCCCACTGTCGTCTTTCCCCACATCGATGTTC ATTCCATGGGGGATCATGATGATTGCTCTCTGGTACAACAGGCACACTGG TCCCAGGTGGATGCACTGAGTCGACTGTGGGTCATGGACATCGGATTTCC CGGCAGCACGTGCTCACCCCGTTTGTTTGTCTTCGATCTGATGCGTAACA ACGCGGAGCTATTGAGAATCGATTGTGGACACCATATAGGTGCTAATGAC ACCCACTTTCTGACTGTCCAAATGGGACCCAAGAGTCCGGGATGCGAGCA CGAGCGCCATATTTACTTCATCCTTGGAAAGGTACCAGAAATTCTAGCCT ACGACATCCTGGAGCAGACGTGGCACCGCCTATCCTTGGAGAGCAATAAG TACGAGAATATGAATCAATCGTTTCCCATCAAGCCAGTGGATTTCATCTT CGGAATTCAAGGGGAACTCATACTCTCCGACCAGGATGGTGATCTATACA GTACGGTGGACAGACTGGAAATTGAAGGCAAAAGCGAATTAGCAAGCAAA CCAATTAACAATAGCATTAAACTCACACATTTGGGCAGTCTTCTGGGCAG CAGTCGCAGCATGATCATCGACAATTTCGGAACATTGTACTATGTTATCC CCAAATTCGGAGCTGTCGTACGATGTGCCAAACTAGCCAACATCACAGCC GAGGGCAACGAAATCATATATATCACATCGAAGAACATTCAGCAGATTTT CTTCACCTCCAATGATGCATTATGGGTCCTAAGTGATCGGGTCTTGAATG CGAAGGACATGTGCTTTCCTAGCTTATAACACTTCTATAGTGTCACCTAA ATTCGC
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yellow-k-RA | 1029 | yellow-k-RA | 1..1029 | 1..1029 | 5145 | 100 | Plus |
CG7945-RC | 3575 | CG7945-RC | 2554..3267 | 714..1 | 3570 | 100 | Minus |
CG7945.c | 2502 | CG7945.c | 1481..2194 | 714..1 | 3570 | 100 | Minus |
CG7945-RC | 3575 | CG7945-RC | 2299..2553 | 1031..777 | 1275 | 100 | Minus |
CG7945.c | 2502 | CG7945.c | 1241..1480 | 1018..779 | 1200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15510558..15511588 | 1..1031 | 5140 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15520620..15521650 | 1..1031 | 5155 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15513720..15514750 | 1..1031 | 5155 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\BuT5 | 669 | Dbuz\BuT5 BUT5 669bp | 563..617 | 659..605 | 113 | 67.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15510558..15511594 | 1..1041 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-k-RA | 1..1029 | 1..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-k-RA | 1..1029 | 1..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-k-RA | 1..1029 | 1..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-k-RA | 1..1029 | 1..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-k-RA | 1..1029 | 1..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-k-RA | 1..1034 | 1..1034 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-k-RA | 1..1034 | 1..1034 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-k-RA | 1..1034 | 1..1034 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15520620..15521656 | 1..1041 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15520620..15521656 | 1..1041 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15520620..15521656 | 1..1041 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15513720..15514756 | 1..1041 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15513720..15514756 | 1..1041 | 99 | Plus |
Translation from 0 to 1028
> RT02937.pep MVTHGVLGLGFLIVGLILATDAWLLSESGLNESSYKVRHLSMHFSRVFLS VNVESNDAPTLIEAQWPVSYFPMPTVVFPHIDVHSMGDHDDCSLVQQAHW SQVDALSRLWVMDIGFPGSTCSPRLFVFDLMRNNAELLRIDCGHHIGAND THFLTVQMGPKSPGCEHERHIYFILGKVPEILAYDILEQTWHRLSLESNK YENMNQSFPIKPVDFIFGIQGELILSDQDGDLYSTVDRLEIEGKSELASK PINNSIKLTHLGSLLGSSRSMIIDNFGTLYYVIPKFGAVVRCAKLANITA EGNEIIYITSKNIQQIFFTSNDALWVLSDRVLNAKDMCFPSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23705-PA | 342 | GF23705-PA | 1..342 | 1..342 | 1415 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15905-PA | 344 | GG15905-PA | 1..344 | 1..342 | 1712 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14545-PA | 353 | GH14545-PA | 7..351 | 7..342 | 1166 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yellow-k-PA | 342 | CG7463-PA | 1..342 | 1..342 | 1800 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13116-PA | 349 | GI13116-PA | 24..347 | 22..342 | 1162 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24856-PA | 343 | GL24856-PA | 1..342 | 1..342 | 1274 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20372-PA | 343 | GA20372-PA | 1..342 | 1..342 | 1273 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25535-PA | 343 | GM25535-PA | 1..343 | 1..342 | 1768 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14550-PA | 343 | GD14550-PA | 1..343 | 1..342 | 1780 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13864-PA | 352 | GJ13864-PA | 12..352 | 6..342 | 1153 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10596-PA | 340 | GK10596-PA | 12..339 | 12..342 | 1165 | 65.6 | Plus |
Translation from 1 to 1028
> RT02937.hyp MVTHGVLGLGFLIVGLILATDAWLLSESGLNESSYKVRHLSMHFSRVFLS VNVESNDAPTLIEAQWPVSYFPMPTVVFPHIDVHSMGDHDDCSLVQQAHW SQVDALSRLWVMDIGFPGSTCSPRLFVFDLMRNNAELLRIDCGHHIGAND THFLTVQMGPKSPGCEHERHIYFILGKVPEILAYDILEQTWHRLSLESNK YENMNQSFPIKPVDFIFGIQGELILSDQDGDLYSTVDRLEIEGKSELASK PINNSIKLTHLGSLLGSSRSMIIDNFGTLYYVIPKFGAVVRCAKLANITA EGNEIIYITSKNIQQIFFTSNDALWVLSDRVLNAKDMCFPSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yellow-k-PA | 342 | CG7463-PA | 1..342 | 1..342 | 1800 | 100 | Plus |