BDGP Sequence Production Resources |
Search the DGRC for RT03126
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 31 |
Well: | 26 |
Vector: | pCR2.1 |
Associated Gene/Transcript | Gr94a-RA |
Protein status: | RT03126.pep: gold |
Sequenced Size: | 1242 |
1242 bp assembled on 2010-02-26
GenBank Submission: BT100087.3
> RT03126.complete ATGGACTTCACCAGCGACTACGCGCATCGGCGTATGGTGAAATTTCTGAC GATCATACTGATAGGCTTTATGACCGTCTTCGGACTCCTGGCCAATCGAT ATCGGGCGGGCCGTCGTGAAAGATTCCGCTTCTCAAAGGCAAATCTGGCC TTTGCTTCGCTGTGGGCAATTGCATTCAGCTTGGTTTACGGGCGGCAAAT CTACAAGGAGTACCAGGAGGGTCAGATCAACCTGAAGGACGCCACCACTC TGTACAGCTATATGAACATTACGGTGGCTGTTATTAACTATGTGTCGCAA ATGATAATCAGTGACCATGTGGCCAAGGTGTTGAGCAAAGTGCCCTTCTT TGATACCCTAAAAGAATTCCGTCTGGACAGCAGGTCGCTGTACATATCCA TCGTTTTGGCTCTGGTCAAGACCGTGGCTTTTCCTCTAACAATTGAAGTG GCTTTCATACTGCAACAGAGGCGGCAGCATCCCGAGATGAGCTTGATCTG GACCTTGTACCGGCTGTTTCCCTTAATTATTTCGAATTTTCTCAATAACT GCTACTTTGGCGCAATGGTGGTGGTGAAGGAGATTCTGTACGCTCTGAAC AGACGGCTGGAAGCGCAGCTGCAGGAGGTGAATCTGCTGCAGAGGAAGGA CCAGCTAAAGTTGTACACTAAATACTACCGCATGCAGCGATTTTGCGCCT TGGCGGATGAACTCGACCAGCTGGCGTATCGCTATAGGTTGATATATGTG CATTCGGGAAAGTATCTGACCCCAATGTCCTTGTCCATGATTCTGTCGCT CATATGCCACCTGCTCGGAATAACGGTGGGTTTCTACAGTCTGTACTATG CCATAGCGGACACCTTAATCATGGGCAAGCCGTACGATGGTCTTGGATCG CTGATCAATCTGGTTTTCCTCTCCATCTCGCTGGCGGAGATCACATTGCT CACGCATTTGTGCAACCACCTATTGGTGGCCACCCGAAGATCGGCAGTCA TTCTCCAGGAGATGAATCTCCAGCATGCGGACAGCCGCTACCGTCAGGCA GTCCACGGCTTTACTCTGCTGGTCACGGTGACCAAGTACCAAATTAAACC CTTGGGCTTGTACGAGCTGGACATGCGACTGATCAGCAATGTCTTCTCGG CGGTGGCCAGCTTCCTGCTGATCCTCGTGCAGGCCGATCTGTCCCAGCGC TTCAAGATGCAATAGCACTTCTATAGTGTCACCTAAATTCGC
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gr94a-RA | 1215 | Gr94a-RA | 1..1215 | 1..1215 | 6075 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18875098..18876313 | 1..1216 | 5960 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23051689..23052904 | 1..1216 | 6080 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22792520..22793735 | 1..1216 | 6080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18875098..18876321 | 1..1224 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr94a-RA | 1..1215 | 1..1215 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr94a-RA | 1..1215 | 1..1215 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr94a-RA | 1..1215 | 1..1215 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr94a-RA | 1..1215 | 1..1215 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr94a-RA | 1..1215 | 1..1215 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr94a-RA | 1..1215 | 1..1215 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr94a-RA | 1..1215 | 1..1215 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr94a-RA | 1..1215 | 1..1215 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23051689..23052912 | 1..1224 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23051689..23052912 | 1..1224 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23051689..23052912 | 1..1224 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18877411..18878634 | 1..1224 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22792520..22793743 | 1..1224 | 99 | Plus |
Translation from 0 to 1214
> RT03126.pep MDFTSDYAHRRMVKFLTIILIGFMTVFGLLANRYRAGRRERFRFSKANLA FASLWAIAFSLVYGRQIYKEYQEGQINLKDATTLYSYMNITVAVINYVSQ MIISDHVAKVLSKVPFFDTLKEFRLDSRSLYISIVLALVKTVAFPLTIEV AFILQQRRQHPEMSLIWTLYRLFPLIISNFLNNCYFGAMVVVKEILYALN RRLEAQLQEVNLLQRKDQLKLYTKYYRMQRFCALADELDQLAYRYRLIYV HSGKYLTPMSLSMILSLICHLLGITVGFYSLYYAIADTLIMGKPYDGLGS LINLVFLSISLAEITLLTHLCNHLLVATRRSAVILQEMNLQHADSRYRQA VHGFTLLVTVTKYQIKPLGLYELDMRLISNVFSAVASFLLILVQADLSQR FKMQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16722-PA | 404 | GF16722-PA | 1..403 | 1..403 | 1590 | 72 | Plus |
Dana\GF22967-PA | 331 | GF22967-PA | 2..325 | 56..377 | 618 | 38 | Plus |
Dana\GF18046-PA | 414 | GF18046-PA | 190..402 | 181..402 | 156 | 21.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11182-PA | 404 | GG11182-PA | 1..404 | 1..404 | 1905 | 89.4 | Plus |
Dere\GG12159-PA | 417 | GG12159-PA | 38..417 | 26..404 | 724 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22382-PA | 410 | GH22382-PA | 16..410 | 8..402 | 1163 | 53.7 | Plus |
Dgri\GH18967-PA | 417 | GH18967-PA | 45..417 | 27..404 | 608 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gr94a-PA | 404 | CG31280-PA | 1..404 | 1..404 | 2026 | 100 | Plus |
Gr97a-PB | 425 | CG33083-PB | 29..425 | 9..404 | 699 | 37.4 | Plus |
Gr97a-PA | 423 | CG33083-PA | 29..423 | 9..404 | 683 | 37.2 | Plus |
Gr93a-PA | 419 | CG13417-PA | 67..409 | 49..402 | 180 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22003-PA | 384 | GI22003-PA | 1..384 | 19..402 | 1118 | 54.7 | Plus |
Dmoj\GI23297-PA | 421 | GI23297-PA | 44..421 | 26..404 | 648 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27123-PA | 394 | GL27123-PA | 1..393 | 1..403 | 1493 | 70.7 | Plus |
Dper\GL23631-PA | 427 | GL23631-PA | 41..427 | 19..404 | 724 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Gr94a-PA | 404 | GA16146-PA | 6..403 | 6..403 | 1535 | 72.4 | Plus |
Dpse\Gr97a-PA | 427 | GA17266-PA | 41..427 | 19..404 | 725 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26481-PA | 404 | GM26481-PA | 1..404 | 1..404 | 1992 | 93.6 | Plus |
Dsec\GM10153-PA | 319 | GM10153-PA | 1..319 | 88..404 | 634 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20995-PA | 404 | GD20995-PA | 1..404 | 1..404 | 2017 | 94.6 | Plus |
Dsim\GD18108-PA | 319 | GD18108-PA | 1..319 | 88..404 | 627 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14357-PA | 408 | GJ14357-PA | 15..406 | 12..402 | 1041 | 50.8 | Plus |
Dvir\GJ24152-PA | 421 | GJ24152-PA | 29..421 | 11..404 | 654 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19193-PA | 411 | GK19193-PA | 34..406 | 28..400 | 1142 | 55 | Plus |
Dwil\GK15501-PA | 234 | GK15501-PA | 1..234 | 172..404 | 522 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10348-PA | 209 | GE10348-PA | 1..204 | 1..204 | 953 | 87.3 | Plus |
Dyak\GE10604-PA | 425 | GE10604-PA | 29..425 | 9..404 | 760 | 38.9 | Plus |
Dyak\GE10349-PA | 114 | GE10349-PA | 1..113 | 291..403 | 547 | 93.8 | Plus |
Translation from 1 to 1214
> RT03126.hyp MDFTSDYAHRRMVKFLTIILIGFMTVFGLLANRYRAGRRERFRFSKANLA FASLWAIAFSLVYGRQIYKEYQEGQINLKDATTLYSYMNITVAVINYVSQ MIISDHVAKVLSKVPFFDTLKEFRLDSRSLYISIVLALVKTVAFPLTIEV AFILQQRRQHPEMSLIWTLYRLFPLIISNFLNNCYFGAMVVVKEILYALN RRLEAQLQEVNLLQRKDQLKLYTKYYRMQRFCALADELDQLAYRYRLIYV HSGKYLTPMSLSMILSLICHLLGITVGFYSLYYAIADTLIMGKPYDGLGS LINLVFLSISLAEITLLTHLCNHLLVATRRSAVILQEMNLQHADSRYRQA VHGFTLLVTVTKYQIKPLGLYELDMRLISNVFSAVASFLLILVQADLSQR FKMQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gr94a-PA | 404 | CG31280-PA | 1..404 | 1..404 | 2026 | 100 | Plus |
Gr97a-PB | 425 | CG33083-PB | 29..425 | 9..404 | 699 | 37.4 | Plus |
Gr97a-PA | 423 | CG33083-PA | 29..423 | 9..404 | 683 | 37.2 | Plus |
Gr93a-PA | 419 | CG13417-PA | 67..409 | 49..402 | 180 | 21.8 | Plus |