BDGP Sequence Production Resources |
Search the DGRC for RT03134
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 31 |
Well: | 34 |
Vector: | pCR2.1 |
Associated Gene/Transcript | Teh3-RA |
Protein status: | RT03134.pep: gold |
Sequenced Size: | 1361 |
1361 bp assembled on 2010-06-21
GenBank Submission: BT100089.4
> RT03134.complete ATGGGCAAGAAAAAGGTGCCCGTTGAGGACCTGGTGGTTCCACCGCAGGA CACGCGAATATGCGGCACCATATGCATCTGCCAGATGACCCTGGTGCTCA GCTCGGTGGCTCTCGTCTACCTCACGGTGGCCATATATATGCCCTCAACC AGGGCCTTCAAAAGTGGCATCGATCCCACGCCGGTGATGTGCACCACCAC GCGGGCGGTGAACAAGGACAACTGCGAGTGGGGCAGTTGTGGCGAGTGGT GTCTGAGCAAGACTTCCGGAGCCTGCATCCAGATCTATGTGAATCTGCGC AGCAATGGCAGCAATCTCATATTCCAGAACTGCACCAACTCGGCCAATAA AACGTGCTACGGGATCGACCAGGATCGCGCGGACAAGGCCAGGTGCATCA ATGATGAGTGCAAGAATCTCACGGGCACCTTCAATTGCACCGCTGGCCAG TGTCTGAACATCACGGATGCCTTCGAGTGCATCTTCCACAACAGTGATGC ACCAGTCAAGTGTTCCGGCAGGCGGGGAAAGATCAACTGCATGGACATCA GCGGGCTGTACTCCTGCAGTCGAGGAACGTGCCGGAAGATCCGTACTCCC TATAACTGTGACCGAAGGTGCGTGGACATCCCAACACGGAACAAGAACGT GGTGGTCCTCAGCGGGGACAAGGTCTACCTGTCGCAGTGCCAGAATGCCA TCAATGCCGAAACTCTGGAGGAGGTGTGGAACGAGTCAAGCGAAAATGTA GCAATGACATCGTGTTACTTCATCAGGCACACCTCGGACCAGGTGGATGC GGTGGACTGCATCAATGGCTCCACGCTGGAGACCAATATGCTCAGCGATC TGACCAACTTCACATATCTGAGCCACCTGCACGTGTCGGTGGCCACTCCA GTGCCGGAAATAGCACCACCCGATGTGGACCTCACCATTTCCAACGAGTC CAAGCTGATGATCAATCTGGAGGGGTGTGTGAACACTCTGATGGACGAGT GCAAGGAGTTCCTCAAGGACTTCGGACGCGATGGCAGCGACCACAATGCC CGGGCCCGCTTCCCGTGCTTCTATTCGCCCGGAAAGAAGGACGTGGTGGT GGCCCGATTCGACCTGGAGGTCACCTATCGCCAGTTTGTGTTCGCCTCGG TAGTGCCATCGGTTCTGTTCGTGGTCTCGTGTTCCATCCTGATCATGTGC CAGACCACCGTCTACGTGGGCGACGATGCCAAGATGCGCTTCAAAGGATG TGTGGACACGGAGACGGTCCTGAATAAGAACAACGTGGGCGCACCCACCA ACGGCGACATGGGCGGGGGCGGCGGCGATGAGGTTATGGCCCTATGACAC TTCTATAGTGT
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4182703..4184049 | 1347..1 | 6735 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 4183317..4184663 | 1347..1 | 6735 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 4183317..4184663 | 1347..1 | 6735 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4182703..4184049 | 1..1347 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh3-RA | 1..1347 | 1..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh3-RA | 1..1347 | 1..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh3-RA | 1..1347 | 1..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh3-RA | 1..1347 | 1..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh3-RA | 1..1347 | 1..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh3-RA | 1..1347 | 1..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh3-RA | 1..1347 | 1..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh3-RA | 1..1347 | 1..1347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4183317..4184663 | 1..1347 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4183317..4184663 | 1..1347 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4183317..4184663 | 1..1347 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4183317..4184663 | 1..1347 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4183317..4184663 | 1..1347 | 100 | Minus |
Translation from 0 to 1346
> RT03134.pep MGKKKVPVEDLVVPPQDTRICGTICICQMTLVLSSVALVYLTVAIYMPST RAFKSGIDPTPVMCTTTRAVNKDNCEWGSCGEWCLSKTSGACIQIYVNLR SNGSNLIFQNCTNSANKTCYGIDQDRADKARCINDECKNLTGTFNCTAGQ CLNITDAFECIFHNSDAPVKCSGRRGKINCMDISGLYSCSRGTCRKIRTP YNCDRRCVDIPTRNKNVVVLSGDKVYLSQCQNAINAETLEEVWNESSENV AMTSCYFIRHTSDQVDAVDCINGSTLETNMLSDLTNFTYLSHLHVSVATP VPEIAPPDVDLTISNESKLMINLEGCVNTLMDECKEFLKDFGRDGSDHNA RARFPCFYSPGKKDVVVARFDLEVTYRQFVFASVVPSVLFVVSCSILIMC QTTVYVGDDAKMRFKGCVDTETVLNKNNVGAPTNGDMGGGGGDEVMAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23880-PA | 448 | GF23880-PA | 1..448 | 1..448 | 2260 | 96 | Plus |
Dana\GF23882-PA | 524 | GF23882-PA | 10..423 | 12..413 | 793 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14212-PA | 448 | GG14212-PA | 1..448 | 1..448 | 2387 | 99.8 | Plus |
Dere\GG14214-PA | 524 | GG14214-PA | 1..423 | 1..413 | 801 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15549-PA | 449 | GH15549-PA | 1..449 | 1..448 | 2230 | 94.2 | Plus |
Dgri\GH15551-PA | 530 | GH15551-PA | 10..423 | 12..413 | 806 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Teh3-PA | 448 | CG18676-PA | 1..448 | 1..448 | 2407 | 100 | Plus |
Teh4-PB | 524 | CG15003-PB | 1..423 | 1..413 | 820 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16824-PA | 448 | GI16824-PA | 1..448 | 1..448 | 2231 | 94.6 | Plus |
Dmoj\GI16826-PA | 525 | GI16826-PA | 10..423 | 12..413 | 800 | 40.1 | Plus |
Dmoj\GI21411-PA | 75 | GI21411-PA | 1..63 | 1..63 | 313 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12732-PA | 331 | GL12732-PA | 1..207 | 1..207 | 1096 | 98.6 | Plus |
Dper\GL12732-PA | 331 | GL12732-PA | 208..331 | 325..448 | 650 | 96.8 | Plus |
Dper\GL12734-PA | 129 | GL12734-PA | 10..124 | 12..134 | 320 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15048-PA | 448 | GA15048-PA | 1..448 | 1..448 | 2344 | 97.5 | Plus |
Dpse\GA13421-PA | 524 | GA13421-PA | 10..423 | 12..413 | 813 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14004-PA | 448 | GM14004-PA | 1..448 | 1..448 | 2391 | 100 | Plus |
Dsec\GM14006-PA | 519 | GM14006-PA | 1..423 | 1..413 | 799 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13284-PA | 448 | GD13284-PA | 1..448 | 1..448 | 2391 | 100 | Plus |
Dsim\GD13287-PA | 524 | GD13287-PA | 1..423 | 1..413 | 795 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12572-PA | 448 | GJ12572-PA | 1..448 | 1..448 | 2271 | 94.4 | Plus |
Dvir\GJ12574-PA | 518 | GJ12574-PA | 10..423 | 12..413 | 809 | 40.8 | Plus |
Translation from 1 to 1346
> RT03134.hyp MGKKKVPVEDLVVPPQDTRICGTICICQMTLVLSSVALVYLTVAIYMPST RAFKSGIDPTPVMCTTTRAVNKDNCEWGSCGEWCLSKTSGACIQIYVNLR SNGSNLIFQNCTNSANKTCYGIDQDRADKARCINDECKNLTGTFNCTAGQ CLNITDAFECIFHNSDAPVKCSGRRGKINCMDISGLYSCSRGTCRKIRTP YNCDRRCVDIPTRNKNVVVLSGDKVYLSQCQNAINAETLEEVWNESSENV AMTSCYFIRHTSDQVDAVDCINGSTLETNMLSDLTNFTYLSHLHVSVATP VPEIAPPDVDLTISNESKLMINLEGCVNTLMDECKEFLKDFGRDGSDHNA RARFPCFYSPGKKDVVVARFDLEVTYRQFVFASVVPSVLFVVSCSILIMC QTTVYVGDDAKMRFKGCVDTETVLNKNNVGAPTNGDMGGGGGDEVMAL*