BDGP Sequence Production Resources |
Search the DGRC for RT03431
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 34 |
Well: | 31 |
Vector: | pCR2.1 |
Associated Gene/Transcript | Osi1-RA |
Protein status: | RT03431.pep: gold |
Sequenced Size: | 927 |
927 bp assembled on 2010-06-21
GenBank Submission: BT100152.4
> RT03431.complete ATGCTGCTGTGTCGCGTTGTGCTGGCACTGCTGCTGCTGGTGCTACTCCA CTACTGCCAGGCGAAGGATGAAGGTGAAACCACACAGCGTGGAGCAGTGC TGGTCTCACTGACTGAGAACATGGCCAAATCGGCAGGATCGCAGCTCGTC CAAGCCGATCCCTTCATCTCGCGCAACCAGAAGCAGTGCTTTGAGACCCG CAGTCTGGTGTCCTGCATCAAGTACAAGACCAGCAAATTGATCTGGAAAC TGGCCACTAACAGCATGGGCTTCTTCCCCAGCGAGTACGGGCGCGATCTG GCCGGGGACAGAGGCCGCTGGCTGAGATTAGTCCAGTTGGGCGAGCCCGC CGATGAGGTGGTCGTGTTCAACGACGCTAAGAGCTTAGAAGGTGACAGTG AACTGACGATGATTCTCAAGTTCCTGAAAAGGGCAATGGAGACGTTTGGG CGAAACCACGGACTCCAACTGAGGCTGAACAGCGAGGGTGGAGCGAGAGT CATGGAGGAATCGGAAGCACGATTGAAGCGCAAGAAGAAGAAGTGGCTCA TTATCCTGCCCCTCGTCATTCTGATGAAGATTGCCCACCTGAAGATGACT TTGGTGAGCATGCTGATGGGCGTGCTCGGCATGAACGTGCTGCTGGTCGG CGGCGTGGGCTGGCTGATCCACTACCTTAAGTACAAGACCATGTGCAAGA TCCACCCGCATCTGGTGCAGACGCACTCGCACGTCTACGAGTCAGATCCC TCGGACTACTCCCAGTTCGTGGGCAGCGGTAGCTACTCCAACTCGTACTC CCCGTACAGCTCCGGATCGGGGGCTCCTCACGAGTTGGGCGGCAATAGCT ACAGCAAGGACTGGGCCACGAGTAAGGCCTACAACGCGCACAACTATCTT GACACGATCAGCAAGCGGATACAGTAG
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 2000075..2000488 | 514..927 | 2055 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 1999300..1999693 | 1..394 | 1970 | 100 | Plus |
chr3R | 27901430 | chr3R | 1999888..2000014 | 388..514 | 620 | 99.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1999300..1999690 | 1..391 | 100 | -> | Plus |
chr3R | 1999892..2000014 | 392..514 | 99 | -> | Plus |
chr3R | 2000076..2000488 | 515..927 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi1-RA | 1..927 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi1-RA | 1..927 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi1-RA | 1..927 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi1-RA | 1..927 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi1-RA | 1..927 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi1-RA | 1..927 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi1-RA | 97..1023 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi1-RA | 97..1023 | 1..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6173645..6174035 | 1..391 | 100 | -> | Plus |
3R | 6174237..6174359 | 392..514 | 100 | -> | Plus |
3R | 6174421..6174833 | 515..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6173645..6174035 | 1..391 | 100 | -> | Plus |
3R | 6174237..6174359 | 392..514 | 100 | -> | Plus |
3R | 6174421..6174833 | 515..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6173645..6174035 | 1..391 | 100 | -> | Plus |
3R | 6174237..6174359 | 392..514 | 100 | -> | Plus |
3R | 6174421..6174833 | 515..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1999367..1999757 | 1..391 | 100 | -> | Plus |
arm_3R | 1999959..2000081 | 392..514 | 100 | -> | Plus |
arm_3R | 2000143..2000555 | 515..927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5914476..5914866 | 1..391 | 100 | -> | Plus |
3R | 5915068..5915190 | 392..514 | 100 | -> | Plus |
3R | 5915252..5915664 | 515..927 | 100 | Plus |
Translation from 0 to 926
> RT03431.pep MLLCRVVLALLLLVLLHYCQAKDEGETTQRGAVLVSLTENMAKSAGSQLV QADPFISRNQKQCFETRSLVSCIKYKTSKLIWKLATNSMGFFPSEYGRDL AGDRGRWLRLVQLGEPADEVVVFNDAKSLEGDSELTMILKFLKRAMETFG RNHGLQLRLNSEGGARVMEESEARLKRKKKKWLIILPLVILMKIAHLKMT LVSMLMGVLGMNVLLVGGVGWLIHYLKYKTMCKIHPHLVQTHSHVYESDP SDYSQFVGSGSYSNSYSPYSSGSGAPHELGGNSYSKDWATSKAYNAHNYL DTISKRIQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16371-PA | 304 | GF16371-PA | 1..304 | 1..308 | 1177 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13122-PA | 308 | GG13122-PA | 17..308 | 17..308 | 1347 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14014-PA | 579 | GH14014-PA | 405..579 | 131..308 | 614 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Osi1-PA | 308 | CG15585-PA | 1..308 | 1..308 | 1593 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24386-PA | 331 | GI24386-PA | 70..331 | 42..308 | 858 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24048-PA | 147 | GL24048-PA | 1..128 | 1..130 | 401 | 61.2 | Plus |
Dper\GL24049-PA | 76 | GL24049-PA | 5..76 | 220..308 | 308 | 67.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13829-PB | 304 | GA13829-PB | 1..304 | 1..308 | 1194 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10858-PA | 306 | GM10858-PA | 17..306 | 17..308 | 1338 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19841-PA | 308 | GD19841-PA | 1..308 | 1..308 | 1610 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14243-PA | 323 | GJ14243-PA | 53..323 | 35..308 | 989 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13029-PA | 308 | GK13029-PA | 1..308 | 1..308 | 1108 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10183-PA | 308 | GE10183-PA | 17..308 | 17..308 | 1302 | 94.5 | Plus |
Translation from 1 to 926
> RT03431.hyp MLLCRVVLALLLLVLLHYCQAKDEGETTQRGAVLVSLTENMAKSAGSQLV QADPFISRNQKQCFETRSLVSCIKYKTSKLIWKLATNSMGFFPSEYGRDL AGDRGRWLRLVQLGEPADEVVVFNDAKSLEGDSELTMILKFLKRAMETFG RNHGLQLRLNSEGGARVMEESEARLKRKKKKWLIILPLVILMKIAHLKMT LVSMLMGVLGMNVLLVGGVGWLIHYLKYKTMCKIHPHLVQTHSHVYESDP SDYSQFVGSGSYSNSYSPYSSGSGAPHELGGNSYSKDWATSKAYNAHNYL DTISKRIQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Osi1-PA | 308 | CG15585-PA | 1..308 | 1..308 | 1593 | 100 | Plus |