BDGP Sequence Production Resources |
Search the DGRC for RT05903
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 59 |
Well: | 3 |
Vector: | pCR2.1 |
Associated Gene/Transcript | mei-W68-RA |
Protein status: | RT05903.pep: gold |
Sequenced Size: | 996 |
996 bp assembled on 2010-02-26
GenBank Submission: BT120379.1
> RT05903.complete ATGGATGAATTTTCGGAGAATATAGAAAGAATTGCCCTCGAGTTGCTGAG CAACTTGGTTCATGGCAATGCCACTCTTAGTGTTCCCCGAAATTCATCCG GAAACGTGATCTCGGAATATCGACGAGTCAGCTATAATAATCGCGGAAGT CGCCATAGCTTTTGCGTGCTGATTTACATGCTCTCCCGGGTGCACCGATT GCAAGTCCGCGGAGGAAGTTTCACCGTCCGTGGACTATACTATGACAATC CTCTGCTAGTCCGGTCGCAGTCCAGGATTGCCGAAGCCAGGCTAGATGTC TGTCGTATGCTGAGGACATCCCCCCTAAGCTTGGGCATACTGGCCGCCTC CAAGGGCCTGGTGGCAGGCGACTTAAGGCTGCTGATGACCAACGGAGACG TTCTGGACAGCAGCTTGTATGGTGGACCTCTGACATTGCCCACGGATCCC GAGAAGATAGATCGAATCGAAACGCTGGCGGAATTTGTGCTAATCGTTGA AAAGGAGTCGGTTTTTGAGAGTCTCTTATCCAGAAATGTATTTGGTACTT TTGAACGACGCTTCATCCTTATAACTGGAAAAGGATACCCCGATTGCTGT ACCCGGAGGATTGTCCATCGGCTCACCGAGGAGAACCAACTGGCGGCCTA CATTCTCGTTGACGCCGATCCATTTGGCGTCGAGATAATGCTAGTCTATC GCCATGGCTCGAAGTCCATGAGTTTTTCCAGCCAAGGACTAACCACACCT GCGCTGCGTTGGATTGGTCTACACCCCTCGGAGATTCCCGCACTCGGCAC TGGAGCGGTTGCCCTGGTTGCCGGCGACAACAAGAAAATCAATGACCTCC TCGCCCGCCACGATTTGGAGCCGGGAGTGCGGCAGGAACTGCGCATGCTG CAGGACGTTCAGCTGAAGGCCGAAATCGAGAGTGTCATCGACTTCCTGAC CGACGACTATATACCAAATAAAATCAATCGGAACTTGTTTTTGTAG
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mei-W68-RA | 2276 | mei-W68-RA | 862..1857 | 1..996 | 4980 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 2991..3074 | 192..276 | 125 | 64 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 15345213..15345579 | 1..367 | 100 | -> | Plus |
chr2R | 15345638..15346266 | 368..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mei-W68-RA | 1..996 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mei-W68-RA | 1..996 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mei-W68-RA | 1..996 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mei-W68-RA | 1..996 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mei-W68-RA | 862..1857 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mei-W68-RA | 862..1857 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mei-W68-RA | 887..1882 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mei-W68-RA | 887..1882 | 1..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19458052..19458418 | 1..367 | 100 | -> | Plus |
2R | 19458477..19459105 | 368..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19458052..19458418 | 1..367 | 100 | -> | Plus |
2R | 19458477..19459105 | 368..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19458052..19458418 | 1..367 | 100 | -> | Plus |
2R | 19458477..19459105 | 368..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 15345557..15345923 | 1..367 | 100 | -> | Plus |
arm_2R | 15345982..15346610 | 368..996 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19459251..19459617 | 1..367 | 100 | -> | Plus |
2R | 19459676..19460304 | 368..996 | 100 | Plus |
Translation from 0 to 995
> RT05903.pep MDEFSENIERIALELLSNLVHGNATLSVPRNSSGNVISEYRRVSYNNRGS RHSFCVLIYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDV CRMLRTSPLSLGILAASKGLVAGDLRLLMTNGDVLDSSLYGGPLTLPTDP EKIDRIETLAEFVLIVEKESVFESLLSRNVFGTFERRFILITGKGYPDCC TRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQGLTTP ALRWIGLHPSEIPALGTGAVALVAGDNKKINDLLARHDLEPGVRQELRML QDVQLKAEIESVIDFLTDDYIPNKINRNLFL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11715-PA | 330 | GF11715-PA | 1..330 | 1..331 | 1289 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21975-PA | 331 | GG21975-PA | 1..331 | 1..331 | 1638 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20206-PA | 334 | GH20206-PA | 11..334 | 7..331 | 1076 | 62.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mei-W68-PA | 331 | CG7753-PA | 1..331 | 1..331 | 1674 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20732-PA | 325 | GI20732-PA | 12..325 | 8..331 | 1019 | 59.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10528-PA | 333 | GL10528-PA | 1..333 | 4..331 | 1212 | 68.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24396-PA | 333 | GA24396-PA | 1..333 | 4..331 | 1203 | 68.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13291-PA | 331 | GM13291-PA | 1..331 | 1..331 | 1690 | 97.3 | Plus |
Dsec\GM21963-PA | 331 | GM21963-PA | 1..331 | 1..331 | 1690 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11457-PA | 331 | GD11457-PA | 1..331 | 1..331 | 1689 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20469-PA | 349 | GJ20469-PA | 1..349 | 1..331 | 1050 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15872-PA | 346 | GK15872-PA | 15..346 | 7..331 | 1096 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12053-PA | 331 | GE12053-PA | 1..331 | 1..331 | 1635 | 93.4 | Plus |
Translation from 1 to 995
> RT05903.hyp MDEFSENIERIALELLSNLVHGNATLSVPRNSSGNVISEYRRVSYNNRGS RHSFCVLIYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDV CRMLRTSPLSLGILAASKGLVAGDLRLLMTNGDVLDSSLYGGPLTLPTDP EKIDRIETLAEFVLIVEKESVFESLLSRNVFGTFERRFILITGKGYPDCC TRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQGLTTP ALRWIGLHPSEIPALGTGAVALVAGDNKKINDLLARHDLEPGVRQELRML QDVQLKAEIESVIDFLTDDYIPNKINRNLFL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mei-W68-PA | 331 | CG7753-PA | 1..331 | 1..331 | 1674 | 100 | Plus |