Clone RT06949 Report

Search the DGRC for RT06949

Clone and Library Details

Library:RT
Tissue Source:D melanogaster pooled RNA
Created by:
Date Registered:2006-04-14
Comments:TA cloning vector from Invitrogen
Original Plate Number:69
Well:49
Vector:pCR2.1
Associated Gene/TranscriptCyp313a3-RA
Protein status:RT06949.pep: gold
Sequenced Size:1479

Clone Sequence Records

RT06949.complete Sequence

1479 bp assembled on 2010-03-23

GenBank Submission: BT122097.1

> RT06949.complete
ATGGATACGTTTCAACTGCTTTTAGCCGTGGGAGTGTGTTTCTGGATATA
CTTCCTATGGAGTCGTCGCCGGCTCTATATGATGCACTTTAAGATACCAG
GACCAATGGGATTACCAATTCTGGGCATAGCCTTTGAGTATCTGATAACC
TATAAACGTAAAATGAGCATACGAACCAAGTATATGGATATTTACGGCTC
CACATGTTTGGTGTGGGTGGGACCGACGCCATTTGTAATCACTCGGGATC
CGAAGATTGCCGAGGAAATCTTTTTGTCCCCAGAGTGCCTAAATAGGAGC
TCGATATTTTCCAAGCCGGTTAATAGCTGTACAGGAGATGGATTATTATC
ATTAGAGGCATCTAAATGGGTTGATCGTCGCAAGAACTTAAATCCGGCAT
TCAAGCAAAATGTTTTGCTGAGTTTTCTTCCCATCTTCAATTCTGAGGCG
AAAACTTTAGTTGCCTTCCTGGACTCACTTGTCGGTCAGGGTGAAAAAAA
GGTCCGCGACGACATAGTGAGATGGTCTTTTAGAATAGCCACTCAAACCA
CAGTGGGAACTGATGTAAAGAAGGATGCGTCCTTCAAGAACGATTCAGTT
TTGAAAAGTTACGAGACGTTTATGAAAATAATTGTTATGAATGTTTTGTT
GCCATTCACTCACAACAAGATATTTTCAACACTGGGCGGATTTGAAACGC
AGAAAGCTTTGGCCAAGTCCAATGTTAACAAAATGATAGGCACGATTGTT
GACAAAAAGTTAATGACAAAGCCAGAAAGTGGCTCACAGCCTGAAATTAC
CTCTGTCATTAATAAGGCCATCGAACTCCATCGGAATGGAGAAATGTCCC
GGGAAGAGGTGCAATCGGAGTGCTGTTCCTTCGTTGTCGCTGCCTTTGAG
ACAACTGGTGACACGGTGTATCACGCACTCATCCTGCTGGCCATGTTCCC
GGAGCACCAGGACACGGTCTATCAGGAGCTCAAAGAGCTGTTTCCCGTGG
CCGGTGACTTTGAGGTGACCTACGACGATTTGCAAAGGATGGTTTTTTTG
GAGCGCGTGGTAAACGAAACCCTGCGTTTGATACCATCTGTTCCATTCAC
ACCGAGGGAAACAATACGGGATTTCCGTCTATCCTCTGGAGTGGTCATTC
CAAAAGGAGTTGGTATTGGTATCGATATATTTGCTACCCATCGCAACCGG
GATCACTGGGGTACCGATCCATCGTCGTTCAACCCAGATCACTTTCTGCC
CGACAATGTGCGCGATAGGCATCCTTACGCATACATTCCATTTTCGAAGG
GAAGGCGGAATTGTATAGGTTGGAAATATGGGTTGATGTCATCAAAGCTT
GCTTTGTCTAAGATACTTAGAAACTGCAAAGTAAGCACATCTTTTCGATA
CGAAGATCTCGAGTTCGTTGACAACATTGGAATGGAACTAGCTCAGTCAC
CTGGACTAGAATTTCATCGGCGAACTTAA

RT06949.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp313a3-RA 1742 Cyp313a3-RA 123..1601 1..1479 7380 99.9 Plus
Cyp313a2-RA 1482 Cyp313a2-RA 1227..1451 1227..1451 300 75.5 Plus
Cyp313a1.a 1609 Cyp313a1.a 145..343 91..289 200 73.3 Plus
Cyp313a2-RA 1482 Cyp313a2-RA 1040..1158 1040..1158 160 75.6 Plus
Cyp313a2-RA 1482 Cyp313a2-RA 520..577 520..577 140 82.7 Plus
Cyp313a2-RA 1482 Cyp313a2-RA 350..446 350..446 140 76.2 Plus
Cyp313a2-RA 1482 Cyp313a2-RA 158..263 158..263 140 75.4 Plus
Cyp313a1.a 1609 Cyp313a1.a 1333..1453 1269..1389 140 74.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:04:56
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8062885..8063461 1320..744 2840 99.5 Minus
chr3R 27901430 chr3R 8064082..8064282 358..158 990 99.5 Minus
chr3R 27901430 chr3R 8063841..8064027 544..358 935 100 Minus
chr3R 27901430 chr3R 8062675..8062835 1477..1317 805 100 Minus
chr3R 27901430 chr3R 8064342..8064500 159..1 795 100 Minus
chr3R 27901430 chr3R 8063515..8063641 744..618 635 100 Minus
chr3R 27901430 chr3R 8063701..8063775 619..545 360 98.7 Minus
chr3R 27901430 chr3R 8060699..8061136 1320..883 345 71.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:44:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:04:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12237491..12238067 1320..744 2885 100 Minus
3R 32079331 3R 12238688..12238888 358..158 990 99.5 Minus
3R 32079331 3R 12238447..12238633 544..358 935 100 Minus
3R 32079331 3R 12237279..12237441 1479..1317 815 100 Minus
3R 32079331 3R 12238951..12239109 159..1 795 100 Minus
3R 32079331 3R 12238121..12238247 744..618 635 100 Minus
3R 32079331 3R 12238307..12238381 619..545 375 100 Minus
3R 32079331 3R 12235305..12235742 1320..883 315 71.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:53:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 11978322..11978898 1320..744 2885 100 Minus
3R 31820162 3R 11979519..11979719 358..158 990 99.5 Minus
3R 31820162 3R 11979278..11979464 544..358 935 100 Minus
3R 31820162 3R 11978110..11978272 1479..1317 815 100 Minus
3R 31820162 3R 11979782..11979940 159..1 795 100 Minus
3R 31820162 3R 11978952..11979078 744..618 635 100 Minus
3R 31820162 3R 11979138..11979212 619..545 375 100 Minus
3R 31820162 3R 11976136..11976229 1320..1227 185 79.7 Minus
3R 31820162 3R 11976298..11976416 1158..1040 160 75.6 Minus
Blast to na_te.dros performed on 2019-03-15 20:04:54 has no hits.

RT06949.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:05:39 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8063703..8063775 545..617 98 <- Minus
chr3R 8063841..8064026 359..544 100 <- Minus
chr3R 8062673..8062833 1319..1479 100 <- Minus
chr3R 8062887..8063460 745..1318 99 <- Minus
chr3R 8063515..8063641 618..744 100 <- Minus
chr3R 8064082..8064282 158..358 99 <- Minus
chr3R 8064344..8064500 1..157 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-03-23 17:52:55 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp313a3-RA 1..1477 1..1477 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-17 17:09:03 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp313a3-RA 1..1479 1..1479 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:19:21 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp313a3-RA 1..1479 1..1479 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:15:14 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp313a3-RA 1..1479 1..1479 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-03-23 17:52:53 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp313a3-RA 1..1477 1..1477 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-17 17:09:02 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp313a3-RA 1..1479 1..1479 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:19:21 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp313a3-RA 158..1636 1..1479 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:15:14 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp313a3-RA 158..1636 1..1479 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:05:39 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12237279..12237439 1319..1479 100 <- Minus
3R 12237493..12238066 745..1318 100 <- Minus
3R 12238121..12238247 618..744 100 <- Minus
3R 12238309..12238381 545..617 100 <- Minus
3R 12238447..12238632 359..544 100 <- Minus
3R 12238688..12238888 158..358 99 <- Minus
3R 12238953..12239109 1..157 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:05:39 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12237279..12237439 1319..1479 100 <- Minus
3R 12237493..12238066 745..1318 100 <- Minus
3R 12238121..12238247 618..744 100 <- Minus
3R 12238309..12238381 545..617 100 <- Minus
3R 12238447..12238632 359..544 100 <- Minus
3R 12238688..12238888 158..358 99 <- Minus
3R 12238953..12239109 1..157 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:05:39 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12237279..12237439 1319..1479 100 <- Minus
3R 12237493..12238066 745..1318 100 <- Minus
3R 12238121..12238247 618..744 100 <- Minus
3R 12238309..12238381 545..617 100 <- Minus
3R 12238447..12238632 359..544 100 <- Minus
3R 12238688..12238888 158..358 99 <- Minus
3R 12238953..12239109 1..157 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:19:21 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8063001..8063161 1319..1479 100 <- Minus
arm_3R 8063215..8063788 745..1318 100 <- Minus
arm_3R 8063843..8063969 618..744 100 <- Minus
arm_3R 8064031..8064103 545..617 100 <- Minus
arm_3R 8064169..8064354 359..544 100 <- Minus
arm_3R 8064410..8064610 158..358 99 <- Minus
arm_3R 8064675..8064831 1..157 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:33:54 Download gff for RT06949.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11978324..11978897 745..1318 100 <- Minus
3R 11978952..11979078 618..744 100 <- Minus
3R 11979140..11979212 545..617 100 <- Minus
3R 11979278..11979463 359..544 100 <- Minus
3R 11979519..11979719 158..358 99 <- Minus
3R 11979784..11979940 1..157 100   Minus
3R 11978110..11978270 1319..1479 100 <- Minus

RT06949.pep Sequence

Translation from 0 to 1478

> RT06949.pep
MDTFQLLLAVGVCFWIYFLWSRRRLYMMHFKIPGPMGLPILGIAFEYLIT
YKRKMSIRTKYMDIYGSTCLVWVGPTPFVITRDPKIAEEIFLSPECLNRS
SIFSKPVNSCTGDGLLSLEASKWVDRRKNLNPAFKQNVLLSFLPIFNSEA
KTLVAFLDSLVGQGEKKVRDDIVRWSFRIATQTTVGTDVKKDASFKNDSV
LKSYETFMKIIVMNVLLPFTHNKIFSTLGGFETQKALAKSNVNKMIGTIV
DKKLMTKPESGSQPEITSVINKAIELHRNGEMSREEVQSECCSFVVAAFE
TTGDTVYHALILLAMFPEHQDTVYQELKELFPVAGDFEVTYDDLQRMVFL
ERVVNETLRLIPSVPFTPRETIRDFRLSSGVVIPKGVGIGIDIFATHRNR
DHWGTDPSSFNPDHFLPDNVRDRHPYAYIPFSKGRRNCIGWKYGLMSSKL
ALSKILRNCKVSTSFRYEDLEFVDNIGMELAQSPGLEFHRRT*

RT06949.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:23:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17735-PA 492 GF17735-PA 6..490 6..491 1509 54.9 Plus
Dana\GF17731-PA 778 GF17731-PA 1..475 1..478 1466 55.9 Plus
Dana\GF17734-PA 553 GF17734-PA 114..553 48..491 1277 52.3 Plus
Dana\GF17876-PA 482 GF17876-PA 21..481 21..491 1031 43.2 Plus
Dana\GF16333-PA 501 GF16333-PA 16..501 16..491 624 31.1 Plus
Dana\GF17734-PA 553 GF17734-PA 18..129 18..131 215 48.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:23:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17145-PA 492 GG17145-PA 1..492 1..492 2258 82.1 Plus
Dere\GG17146-PA 493 GG17146-PA 1..492 1..492 1601 58.3 Plus
Dere\GG16858-PA 492 GG16858-PA 1..492 1..492 1443 53.9 Plus
Dere\GG17148-PA 488 GG17148-PA 1..487 1..491 1264 47.3 Plus
Dere\GG17107-PA 494 GG17107-PA 21..494 21..492 1114 44 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:24:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19591-PA 491 GH19591-PA 1..490 1..491 1170 43.9 Plus
Dgri\GH15389-PA 492 GH15389-PA 16..491 14..491 1087 44.8 Plus
Dgri\GH17317-PA 490 GH17317-PA 4..488 5..491 972 39.2 Plus
Dgri\GH22919-PA 503 GH22919-PA 14..503 14..491 622 29.1 Plus
Dgri\GH14221-PA 542 GH14221-PA 32..526 6..476 470 28.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp313a3-PA 492 CG10093-PA 1..492 1..492 2575 100 Plus
Cyp313a2-PB 493 CG10094-PB 1..492 1..492 1550 58.9 Plus
Cyp313a1-PA 492 CG3360-PA 1..491 1..491 1443 53.6 Plus
Cyp313a5-PA 487 CG15807-PA 1..486 1..491 1200 46.6 Plus
Cyp313a4-PA 494 CG6802-PA 1..494 1..492 1118 44.3 Plus
Cyp313b1-PB 502 CG9716-PB 15..502 15..491 613 30.9 Plus
Cyp313b1-PA 502 CG9716-PA 15..502 15..491 613 30.9 Plus
Cyp4c3-PA 535 CG1438-PA 33..519 7..476 477 27.9 Plus
Cyp4ac3-PA 509 CG14031-PA 104..507 87..491 461 30.3 Plus
Cyp4aa1-PB 510 CG8302-PB 20..470 6..458 461 27.9 Plus
Cyp4ac1-PA 509 CG14032-PA 101..507 84..491 460 27.7 Plus
Cyp4ac2-PB 511 CG17970-PB 105..500 87..483 447 28.5 Plus
Cyp318a1-PA 536 CG1786-PA 7..518 7..479 438 27.1 Plus
Cyp4g1-PA 556 CG3972-PA 31..550 7..491 425 26.5 Plus
Cyp4p1-PA 513 CG10842-PA 98..513 83..492 418 27.5 Plus
Cyp4p3-PA 515 CG10843-PA 98..484 83..461 396 27.8 Plus
Cyp4d2-PB 501 CG3466-PB 9..469 6..458 386 27.2 Plus
Cyp4d2-PA 501 CG3466-PA 9..469 6..458 386 27.2 Plus
Cyp4d20-PA 510 CG16761-PA 18..474 20..457 374 26.1 Plus
Cyp4e3-PA 526 CG4105-PA 8..466 7..461 370 25 Plus
Cyp4d1-PB 503 CG3656-PB 3..470 6..461 365 24.9 Plus
Cyp4p2-PA 520 CG1944-PA 130..487 114..461 359 26.7 Plus
Cyp4e1-PA 531 CG2062-PA 9..467 8..461 354 25.7 Plus
Cyp4d14-PA 507 CG3540-PA 3..474 1..458 353 27 Plus
Cyp4d14-PB 510 CG3540-PB 3..477 1..458 351 27.2 Plus
Cyp4e2-PB 526 CG2060-PB 7..467 6..461 343 24.2 Plus
Cyp4e2-PA 526 CG2060-PA 7..467 6..461 343 24.2 Plus
Cyp4d21-PA 511 CG6730-PA 32..476 31..458 339 25.8 Plus
Cyp4s3-PA 495 CG9081-PA 63..456 65..458 335 25.9 Plus
Cyp4d1-PA 512 CG3656-PA 9..479 6..461 327 23.8 Plus
Cyp311a1-PB 483 CG1488-PB 6..480 7..488 325 24.3 Plus
Cyp6w1-PB 514 CG8345-PB 3..475 6..463 321 25.6 Plus
Cyp6w1-PA 514 CG8345-PA 3..475 6..463 321 25.6 Plus
Cyp4d8-PA 463 CG4321-PA 10..428 52..457 317 25.1 Plus
Cyp6d4-PA 515 CG12800-PA 78..503 77..486 310 25.7 Plus
Cyp6a14-PE 509 CG8687-PE 298..482 282..466 309 34.9 Plus
Cyp6a14-PC 509 CG8687-PC 298..482 282..466 309 34.9 Plus
Cyp4ae1-PA 496 CG10755-PA 34..463 32..458 303 23.4 Plus
Cyp4g15-PC 574 CG11715-PC 355..573 274..492 300 33.2 Plus
Cyp4g15-PA 574 CG11715-PA 355..573 274..492 300 33.2 Plus
Cyp6a9-PB 504 CG10246-PB 1..473 1..462 297 25.1 Plus
Cyp9f2-PA 516 CG11466-PA 79..480 77..458 291 23.6 Plus
Cyp6a21-PA 504 CG10247-PA 81..473 77..462 289 23.4 Plus
Cyp6d5-PA 508 CG3050-PA 6..487 6..472 289 24.3 Plus
Cyp6a13-PA 493 CG2397-PA 264..461 269..464 285 32 Plus
Cyp6a2-PA 506 CG9438-PA 118..475 115..462 283 24.4 Plus
Cyp312a1-PB 510 CG5137-PB 6..475 4..458 280 21.3 Plus
Cyp312a1-PA 510 CG5137-PA 6..475 4..458 280 21.3 Plus
Cyp6a16-PC 500 CG7249-PC 99..464 97..462 273 23.4 Plus
Cyp6a16-PB 500 CG7249-PB 99..464 97..462 273 23.4 Plus
Cyp6g2-PA 519 CG8859-PA 81..488 77..466 261 23.9 Plus
Cyp4g15-PC 574 CG11715-PC 20..230 6..225 199 28.2 Plus
Cyp4g15-PA 574 CG11715-PA 20..230 6..225 199 28.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:24:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22266-PA 481 GI22266-PA 1..480 1..492 1070 43.7 Plus
Dmoj\GI10234-PA 518 GI10234-PA 6..518 6..491 616 31.2 Plus
Dmoj\GI22127-PA 533 GI22127-PA 32..517 6..476 485 29.4 Plus
Dmoj\GI19140-PA 721 GI19140-PA 264..684 34..461 432 28.1 Plus
Dmoj\GI14748-PA 581 GI14748-PA 28..552 14..476 431 26.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:24:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21562-PA 493 GL21562-PA 1..493 1..491 1279 47.4 Plus
Dper\GL21563-PA 493 GL21563-PA 1..492 1..491 1264 45 Plus
Dper\GL27339-PA 475 GL27339-PA 1..474 1..491 1104 43.4 Plus
Dper\GL27338-PA 490 GL27338-PA 1..490 1..492 1059 42.1 Plus
Dper\GL24504-PA 502 GL24504-PA 7..502 6..491 641 30.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26335-PA 493 GA26335-PA 1..492 1..491 1266 45 Plus
Dpse\GA26334-PA 493 GA26334-PA 1..493 1..491 1254 46.8 Plus
Dpse\GA27042-PA 491 GA27042-PA 1..490 1..491 1126 43.4 Plus
Dpse\GA19872-PA 490 GA19872-PA 1..490 1..492 1057 42.1 Plus
Dpse\GA21985-PA 502 GA21985-PA 7..502 6..491 648 30.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26028-PA 492 GM26028-PA 1..492 1..492 2505 92.9 Plus
Dsec\GM26029-PA 494 GM26029-PA 1..493 1..492 1633 59.8 Plus
Dsec\GM24167-PA 492 GM24167-PA 1..492 1..492 1434 52.8 Plus
Dsec\GM25991-PA 492 GM25991-PA 1..492 1..492 1151 44.4 Plus
Dsec\GM26333-PA 503 GM26333-PA 11..503 6..491 573 29.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:24:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20586-PA 492 GD20586-PA 1..492 1..492 2522 94.1 Plus
Dsim\GD20587-PA 495 GD20587-PA 1..494 1..491 1587 57.7 Plus
Dsim\GD18964-PA 492 GD18964-PA 1..492 1..492 1450 53.5 Plus
Dsim\GD20551-PA 494 GD20551-PA 1..494 1..492 1155 44.3 Plus
Dsim\GD20858-PA 503 GD20858-PA 11..503 6..491 568 29.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:24:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24057-PA 495 GJ24057-PA 1..495 1..492 1122 44.4 Plus
Dvir\GJ10058-PA 489 GJ10058-PA 2..488 5..491 1081 43.4 Plus
Dvir\GJ11039-PA 515 GJ11039-PA 14..515 14..491 647 30.5 Plus
Dvir\GJ24249-PA 535 GJ24249-PA 32..519 6..476 479 28.3 Plus
Dvir\GJ21667-PA 516 GJ21667-PA 82..485 66..461 453 28.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:24:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13561-PA 475 GK13561-PA 1..474 1..491 1066 43.3 Plus
Dwil\GK11539-PA 722 GK11539-PA 233..721 1..492 1049 41.8 Plus
Dwil\GK11540-PA 580 GK11540-PA 151..579 55..491 935 40.5 Plus
Dwil\GK14074-PA 499 GK14074-PA 5..499 6..491 647 30.1 Plus
Dwil\GK14161-PA 533 GK14161-PA 33..517 7..476 485 29 Plus
Dwil\GK11539-PA 722 GK11539-PA 52..223 182..352 282 34.9 Plus
Dwil\GK11540-PA 580 GK11540-PA 2..100 30..140 157 32.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:24:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24535-PA 492 GE24535-PA 1..492 1..492 2214 80.5 Plus
Dyak\GE24536-PA 493 GE24536-PA 1..492 1..492 1614 57.7 Plus
Dyak\GE24239-PA 492 GE24239-PA 1..492 1..492 1451 53.7 Plus
Dyak\GE24537-PA 488 GE24537-PA 1..487 1..491 1248 46.4 Plus
Dyak\GE24496-PA 494 GE24496-PA 21..493 21..491 1098 43.7 Plus

RT06949.hyp Sequence

Translation from 1 to 1476

> RT06949.hyp
MDTFQLLLAVGVCFWIYFLWSRRRLYMMHFKIPGPMGLPILGIAFEYLIT
YKRKMSIRTKYMDIYGSTCLVWVGPTPFVITRDPKIAEEIFLSPECLNRS
SIFSKPVNSCTGDGLLSLEASKWVDRRKNLNPAFKQNVLLSFLPIFNSEA
KTLVAFLDSLVGQGEKKVRDDIVRWSFRIATQTTVGTDVKKDASFKNDSV
LKSYETFMKIIVMNVLLPFTHNKIFSTLGGFETQKALAKSNVNKMIGTIV
DKKLMTKPESGSQPEITSVINKAIELHRNGEMSREEVQSECCSFVVAAFE
TTGDTVYHALILLAMFPEHQDTVYQELKELFPVAGDFEVTYDDLQRMVFL
ERVVNETLRLIPSVPFTPRETIRDFRLSSGVVIPKGVGIGIDIFATHRNR
DHWGTDPSSFNPDHFLPDNVRDRHPYAYIPFSKGRRNCIGWKYGLMSSKL
ALSKILRNCKVSTSFRYEDLEFVDNIGMELAQSPGLEFHRRT

RT06949.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:58:51
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp313a3-PA 492 CG10093-PA 1..492 1..492 2575 100 Plus
Cyp313a2-PB 493 CG10094-PB 1..492 1..492 1550 58.9 Plus
Cyp313a1-PA 492 CG3360-PA 1..491 1..491 1443 53.6 Plus
Cyp313a5-PA 487 CG15807-PA 1..486 1..491 1200 46.6 Plus
Cyp313a4-PA 494 CG6802-PA 1..494 1..492 1118 44.3 Plus