Clone RT06950 Report

Search the DGRC for RT06950

Clone and Library Details

Library:RT
Tissue Source:D melanogaster pooled RNA
Created by:
Date Registered:2006-04-14
Comments:TA cloning vector from Invitrogen
Original Plate Number:69
Well:50
Vector:pCR2.1
Associated Gene/TranscriptHr51-RC
Protein status:RT06950.pep: gold
Sequenced Size:1749

Clone Sequence Records

RT06950.complete Sequence

1749 bp assembled on 2011-07-27

GenBank Submission: BT122090.2

> RT06950.complete
ATGAATAAGGAAGAAAATTCCTCCGAAACACGACCATCTTCTCAAGAACT
CCACAGTCCGCAGCGGCATTGCTACACTCCGCCGCCGGCGCCGATGCACG
GACAGGCGCCTCCACCTACATCAACGGGCGTGGCCCCGCCCACACAGCCA
CCGCCCCCTCATCCCGCCGCCCCAAACGTGCCCAATGGTCGATTGCTGAG
CTGGAATCACAGTGCCGCTGCAGCTGCTGCGGCGGCGGCAGCCCAAGCGG
CAGCCAACTCCATGAACCACTCGTCGGCGGCGGAGGGTTCATCGATGACC
CGGATTAAGGGTCAGAACCTGGGCCTCATCTGCGTGGTGTGCGGCGACAC
CAGCTCGGGAAAGCACTACGGAATCCTAGCCTGCAATGGCTGCTCCGGAT
TCTTCAAACGCAGCGTGCGGCGGAAACTCATTTATCGCTGCCAGGCGGGA
ACGGGACGCTGTGTGGTGGACAAAGCTCATCGGAATCAATGCCAGGCCTG
CAGGCTCAAGAAGTGCCTTCAAATGGGAATGAACAAGGACGCCGTGCAAA
ATGAGCGACAGCCCCGCAACACGGCCACTATACGGCCGGAGACTCTGCGG
GAGATGGAGCACGGACGGGCGCTGCGAGAGGCCGCCGTGGCCGTCGGGGT
TTTCGGACCACCCGTGCTACTGTCTCCGCCCTGCTACGGCTCCGGACTCC
TGCCGCCGCCCTCACTGGGCAGTTTGCCGACGGGACGATTGCTGCACCAC
AACCACCTCACCTCCTCAATGCAATTGGCTGCGAACCACATGGGCGCCGG
CAGCTTTCCCATGTTCAACGCAGCCGGCGTGCACCACTCGCCCAAGGAAA
AGGCCTACGGCATGGAGATGGCCACCAGTGGCAATGTCTCCCACTCGACC
AACTCGAGCAGCAACCACTCCATCGACCCGAGCTCACCGGCGCCGGAAAA
CGCCAAGGAGATAAACATCGCCGGCGGCAGTGTCTCCTCCGTCAGCTCTT
CCAGTCCCACCATGGAAAATGACAATGATGACGACTCCATAGATGTAACC
AACGACAACGAGGAGCCGCATGCAGTCAGCAGATCGGATTCGAGTTTCAT
TATGCCGCAGTTCATGTCGCCCAATCTGTACACCCATCAACACGAAACAG
TTTACGAGACAAGTGCCCGGCTGCTCTTCATGGCCGTCAAGTGGGCCAAG
AACCTGCCCAGCTTTGCAAGACTTTCCTTTCGGGATCAGGTAATTTTGCT
GGAGGAGTCCTGGTCGGAGCTGTTCCTGCTGAACGCAATCCAATGGTGCA
TTCCCCTGGATCCCACCGGCTGCGCCCTCTTCTCGGTGGCGGAGCACTGC
AATAATCTAGAGAACAATGCCAATGGCGACACTTGCATAACAAAGGAGGA
GCTGGCGGCGGATGTGCGAACGCTCCACGAGATCTTCTGCAAATACAAGG
CGGTGCTGGTGGACCCCGCTGAATTCGCGTGCCTCAAGGCGATAGTTCTC
TTCCGGCCGGAAACGCGCGGACTTAAAGATCCGGCGCAGATAGAGAATCT
TCAGGATCAGGCGCACGTGATGCTGTCGCAGCACACAAAGACGCAGTTCA
CCGCCCAGATAGCCAGATTCGGACGACTCCTTCTCATGCTGCCGTTGCTG
CGCATGATTAGCTCCCACAAGATTGAGTCCATCTATTTTCAGCGCACTAT
TGGGAACACGCCCATGGAAAAGGTGCTCTGTGACATGTATAAGAACTAG

RT06950.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
Hr51.a 2141 Hr51.a 346..2093 1..1748 8725 99.9 Plus
Hr51-RC 1837 Hr51-RC 25..1772 1..1748 8725 99.9 Plus
Hr51.b 2404 Hr51.b 609..2356 1..1748 8725 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:51:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 11220776..11221168 45..437 1935 99.5 Plus
chr2R 21145070 chr2R 11225097..11225414 713..1030 1560 99.4 Plus
chr2R 21145070 chr2R 11225602..11225813 1030..1241 1060 100 Plus
chr2R 21145070 chr2R 11226342..11226524 1567..1749 900 99.5 Plus
chr2R 21145070 chr2R 11226113..11226281 1400..1568 845 100 Plus
chr2R 21145070 chr2R 11225887..11226051 1237..1401 825 100 Plus
chr2R 21145070 chr2R 11224555..11224670 541..656 565 99.1 Plus
chr2R 21145070 chr2R 11223291..11223395 437..541 525 100 Plus
chr2R 21145070 chr2R 11224955..11225011 656..712 285 100 Plus
chr2R 21145070 chr2R 11218807..11218852 1..46 230 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:44:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:51:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15333575..15333967 45..437 1965 100 Plus
2R 25286936 2R 15337893..15338210 713..1030 1590 100 Plus
2R 25286936 2R 15338398..15338609 1030..1241 1060 100 Plus
2R 25286936 2R 15339138..15339320 1567..1749 900 99.5 Plus
2R 25286936 2R 15338909..15339077 1400..1568 845 100 Plus
2R 25286936 2R 15338683..15338847 1237..1401 825 100 Plus
2R 25286936 2R 15337347..15337462 541..656 580 100 Plus
2R 25286936 2R 15336083..15336187 437..541 525 100 Plus
2R 25286936 2R 15337751..15337807 656..712 285 100 Plus
2R 25286936 2R 15331601..15331646 1..46 230 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:13:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 15334774..15335166 45..437 1965 100 Plus
2R 25260384 2R 15339092..15339409 713..1030 1590 100 Plus
2R 25260384 2R 15339597..15339808 1030..1241 1060 100 Plus
2R 25260384 2R 15340337..15340519 1567..1749 900 99.4 Plus
2R 25260384 2R 15340108..15340276 1400..1568 845 100 Plus
2R 25260384 2R 15339882..15340046 1237..1401 825 100 Plus
2R 25260384 2R 15338546..15338661 541..656 580 100 Plus
2R 25260384 2R 15337282..15337386 437..541 525 100 Plus
2R 25260384 2R 15338950..15339006 656..712 285 100 Plus
2R 25260384 2R 15332800..15332845 1..46 230 100 Plus
Blast to na_te.dros performed on 2019-03-15 10:51:18 has no hits.

RT06950.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:52:02 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 11224956..11225011 657..712 100 -> Plus
chr2R 11225603..11225811 1031..1239 100 -> Plus
chr2R 11225890..11226051 1240..1401 100 -> Plus
chr2R 11226115..11226279 1402..1566 100 -> Plus
chr2R 11225097..11225414 713..1030 99 -> Plus
chr2R 11218807..11218852 1..46 100 -> Plus
chr2R 11220778..11221168 47..437 99 -> Plus
chr2R 11223292..11223395 438..541 100 -> Plus
chr2R 11224556..11224670 542..656 99 -> Plus
chr2R 11226342..11226524 1567..1749 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-03-23 18:14:38 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
Hr51-RC 1..1747 1..1747 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-07-27 09:25:40 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
Hr51-RC 1..1749 1..1749 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:27:17 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
Hr51-RC 1..1749 1..1749 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:14:03 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
Hr51-RC 1..1749 1..1749 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-03-23 18:14:34 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
Hr51-RC 1..1747 1..1747 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-27 09:25:39 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
Hr51-RC 1..1749 1..1749 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:27:17 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
Hr51-RC 277..2025 1..1749 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:14:03 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
Hr51-RC 277..2025 1..1749 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:52:02 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15331601..15331646 1..46 100 -> Plus
2R 15333577..15333967 47..437 100 -> Plus
2R 15336084..15336187 438..541 100 -> Plus
2R 15337348..15337462 542..656 100 -> Plus
2R 15337752..15337807 657..712 100 -> Plus
2R 15337893..15338210 713..1030 100 -> Plus
2R 15338399..15338607 1031..1239 100 -> Plus
2R 15338686..15338847 1240..1401 100 -> Plus
2R 15338911..15339075 1402..1566 100 -> Plus
2R 15339138..15339320 1567..1749 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:52:02 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15331601..15331646 1..46 100 -> Plus
2R 15333577..15333967 47..437 100 -> Plus
2R 15336084..15336187 438..541 100 -> Plus
2R 15337348..15337462 542..656 100 -> Plus
2R 15337752..15337807 657..712 100 -> Plus
2R 15337893..15338210 713..1030 100 -> Plus
2R 15338399..15338607 1031..1239 100 -> Plus
2R 15338686..15338847 1240..1401 100 -> Plus
2R 15338911..15339075 1402..1566 100 -> Plus
2R 15339138..15339320 1567..1749 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:52:02 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15331601..15331646 1..46 100 -> Plus
2R 15333577..15333967 47..437 100 -> Plus
2R 15336084..15336187 438..541 100 -> Plus
2R 15337348..15337462 542..656 100 -> Plus
2R 15337752..15337807 657..712 100 -> Plus
2R 15337893..15338210 713..1030 100 -> Plus
2R 15338399..15338607 1031..1239 100 -> Plus
2R 15338686..15338847 1240..1401 100 -> Plus
2R 15338911..15339075 1402..1566 100 -> Plus
2R 15339138..15339320 1567..1749 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:27:17 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11224853..11224967 542..656 100 -> Plus
arm_2R 11225257..11225312 657..712 100 -> Plus
arm_2R 11219106..11219151 1..46 100 -> Plus
arm_2R 11221082..11221472 47..437 100 -> Plus
arm_2R 11223589..11223692 438..541 100 -> Plus
arm_2R 11225398..11225715 713..1030 100 -> Plus
arm_2R 11225904..11226112 1031..1239 100 -> Plus
arm_2R 11226191..11226352 1240..1401 100 -> Plus
arm_2R 11226416..11226580 1402..1566 100 -> Plus
arm_2R 11226643..11226825 1567..1749 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:10:01 Download gff for RT06950.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15334776..15335166 47..437 100 -> Plus
2R 15337283..15337386 438..541 100 -> Plus
2R 15338547..15338661 542..656 100 -> Plus
2R 15338951..15339006 657..712 100 -> Plus
2R 15339092..15339409 713..1030 100 -> Plus
2R 15339598..15339806 1031..1239 100 -> Plus
2R 15339885..15340046 1240..1401 100 -> Plus
2R 15340110..15340274 1402..1566 100 -> Plus
2R 15340337..15340519 1567..1749 99   Plus
2R 15332800..15332845 1..46 100 -> Plus

RT06950.pep Sequence

Translation from 0 to 1748

> RT06950.pep
MNKEENSSETRPSSQELHSPQRHCYTPPPAPMHGQAPPPTSTGVAPPTQP
PPPHPAAPNVPNGRLLSWNHSAAAAAAAAAAQAAANSMNHSSAAEGSSMT
RIKGQNLGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAG
TGRCVVDKAHRNQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETLR
EMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSLGSLPTGRLLHH
NHLTSSMQLAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHST
NSSSNHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMENDNDDDSIDVT
NDNEEPHAVSRSDSSFIMPQFMSPNLYTHQHETVYETSARLLFMAVKWAK
NLPSFARLSFRDQVILLEESWSELFLLNAIQWCIPLDPTGCALFSVAEHC
NNLENNANGDTCITKEELAADVRTLHEIFCKYKAVLVDPAEFACLKAIVL
FRPETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLL
RMISSHKIESIYFQRTIGNTPMEKVLCDMYKN*

RT06950.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:16:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13031-PA 552 GF13031-PA 1..552 32..582 2377 91 Plus
Dana\GF15588-PA 702 GF15588-PA 505..692 382..580 441 46.2 Plus
Dana\GF17240-PA 826 GF17240-PA 324..533 355..579 388 40.9 Plus
Dana\GF22927-PA 456 GF22927-PA 34..119 111..195 328 66.3 Plus
Dana\GF15588-PA 702 GF15588-PA 9..95 107..190 322 66.7 Plus
Dana\GF12134-PA 448 GF12134-PA 11..425 75..531 310 25.9 Plus
Dana\GF17240-PA 826 GF17240-PA 205..281 111..188 291 65.4 Plus
Dana\GF22927-PA 456 GF22927-PA 234..451 382..580 246 28.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20513-PA 630 GG20513-PA 1..630 1..582 3012 90.5 Plus
Dere\GG25103-PA 693 GG25103-PA 497..684 382..580 444 46.2 Plus
Dere\GG18706-PA 543 GG18706-PA 319..528 355..579 387 40.9 Plus
Dere\GG11781-PA 438 GG11781-PA 34..119 111..195 327 66.3 Plus
Dere\GG25103-PA 693 GG25103-PA 9..95 107..190 324 66.7 Plus
Dere\GG25225-PA 702 GG25225-PA 244..673 86..561 322 27.2 Plus
Dere\GG18706-PA 543 GG18706-PA 200..276 111..188 290 65.4 Plus
Dere\GG11781-PA 438 GG11781-PA 230..433 382..580 264 30.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:16:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20427-PA 281 GH20427-PA 49..281 344..582 1141 94.6 Plus
Dgri\GH20426-PA 207 GH20426-PA 9..207 16..219 746 74.5 Plus
Dgri\GH11011-PA 719 GH11011-PA 523..710 382..580 440 46.2 Plus
Dgri\GH17319-PA 542 GH17319-PA 338..527 382..579 382 42.4 Plus
Dgri\GH20117-PA 487 GH20117-PA 11..458 75..561 339 26.7 Plus
Dgri\GH11011-PA 719 GH11011-PA 15..101 107..190 322 66.7 Plus
Dgri\GH17319-PA 542 GH17319-PA 199..275 111..188 292 65.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:07
Subject Length Description Subject Range Query Range Score Percent Strand
Hr51-PC 582 CG16801-PC 1..582 1..582 3082 100 Plus
dsf-PB 691 CG9019-PB 333..682 210..580 462 33.1 Plus
dsf-PA 691 CG9019-PA 333..682 210..580 462 33.1 Plus
svp-PC 281 CG11502-PC 57..266 355..579 364 40.9 Plus
svp-PB 543 CG11502-PB 319..528 355..579 364 40.9 Plus
svp-PE 554 CG11502-PE 319..528 355..579 364 40.9 Plus
Hr3-PC 694 CG33183-PC 189..665 40..561 346 27.4 Plus
Hr3-PI 871 CG33183-PI 366..842 40..561 346 27.4 Plus
dsf-PB 691 CG9019-PB 9..183 107..314 336 39.3 Plus
dsf-PA 691 CG9019-PA 9..183 107..314 336 39.3 Plus
Hr39-PD 808 CG8676-PD 278..777 6..551 336 26.1 Plus
Hr39-PA 808 CG8676-PA 278..777 6..551 336 26.1 Plus
Hr39-PB 808 CG8676-PB 278..777 6..551 336 26.1 Plus
ftz-f1-PC 803 CG4059-PC 228..796 50..579 321 22.7 Plus
ftz-f1-PA 803 CG4059-PA 228..796 50..579 321 22.7 Plus
ftz-f1-PB 1027 CG4059-PB 452..1020 50..579 321 22.7 Plus
tll-PA 452 CG1378-PA 34..195 111..250 316 45.1 Plus
Hr3-PF 487 CG33183-PF 11..458 75..561 309 26.4 Plus
Hr3-PA 487 CG33183-PA 11..458 75..561 309 26.4 Plus
Hr3-PH 529 CG33183-PH 11..458 75..561 309 26.4 Plus
svp-PB 543 CG11502-PB 178..276 85..188 293 56.7 Plus
svp-PE 554 CG11502-PE 178..276 85..188 293 56.7 Plus
svp-PA 746 CG11502-PA 178..276 85..188 293 56.7 Plus
Hr3-PD 456 CG33183-PD 22..427 111..561 290 26.9 Plus
Hr83-PA 278 CG10296-PA 7..86 111..190 285 65 Plus
Eip75B-PF 1412 CG8127-PF 387..571 33..225 277 31 Plus
Eip75B-PE 1412 CG8127-PE 387..571 33..225 277 31 Plus
Eip75B-PB 1412 CG8127-PB 387..571 33..225 277 31 Plus
usp-PB 508 CG4380-PB 18..186 9..192 274 34.4 Plus
usp-PA 508 CG4380-PA 18..186 9..192 274 34.4 Plus
Hr78-PF 601 CG7199-PF 51..128 110..188 274 58.2 Plus
Hr78-PE 601 CG7199-PE 51..128 110..188 274 58.2 Plus
Hr78-PB 601 CG7199-PB 51..128 110..188 274 58.2 Plus
Hr78-PD 601 CG7199-PD 51..128 110..188 274 58.2 Plus
Hr78-PC 601 CG7199-PC 51..128 110..188 274 58.2 Plus
Hnf4-PE 704 CG9310-PE 27..216 15..186 273 35 Plus
Hnf4-PA 704 CG9310-PA 27..216 15..186 273 35 Plus
Eip78C-PE 862 CG18023-PE 342..815 91..550 270 23.3 Plus
Eip78C-PD 862 CG18023-PD 342..815 91..550 270 23.3 Plus
Eip78C-PA 862 CG18023-PA 342..815 91..550 270 23.3 Plus
Hnf4-PF 666 CG9310-PF 43..178 62..186 269 40.9 Plus
Hnf4-PD 708 CG9310-PD 85..220 62..186 269 40.9 Plus
Hnf4-PB 732 CG9310-PB 109..244 62..186 269 40.9 Plus
Hr39-PC 701 CG8676-PC 278..664 6..428 267 26.7 Plus
Hr78-PA 599 CG7199-PA 51..126 110..188 254 57 Plus
Eip75B-PC 1199 CG8127-PC 225..358 91..225 245 35.6 Plus
Hr4-PC 1518 CG43934-PC 919..1005 109..194 245 47.7 Plus
Hr4-PD 1529 CG43934-PD 929..1015 109..194 245 47.7 Plus
Hr4-PF 1611 CG43934-PF 1012..1098 109..194 245 47.7 Plus
Hr4-PE 1842 CG43934-PE 1243..1329 109..194 245 47.7 Plus
Hr4-PK 1843 CG43934-PK 1243..1329 109..194 245 47.7 Plus
Hr4-PJ 1843 CG43934-PJ 1243..1329 109..194 245 47.7 Plus
Hr4-PH 1863 CG43934-PH 919..1005 109..194 245 47.7 Plus
Hr4-PG 1986 CG43934-PG 1386..1472 109..194 245 47.7 Plus
Hr4-PI 2123 CG43934-PI 919..1005 109..194 245 47.7 Plus
usp-PB 508 CG4380-PB 289..493 392..578 240 30.6 Plus
usp-PA 508 CG4380-PA 289..493 392..578 240 30.6 Plus
tll-PA 452 CG1378-PA 223..447 373..580 229 28.5 Plus
Hnf4-PE 704 CG9310-PE 275..466 384..579 213 31 Plus
Hnf4-PA 704 CG9310-PA 275..466 384..579 213 31 Plus
Hnf4-PF 666 CG9310-PF 237..428 384..579 213 31 Plus
Hnf4-PD 708 CG9310-PD 279..470 384..579 213 31 Plus
Hnf4-PB 732 CG9310-PB 303..494 384..579 213 31 Plus
svp-PA 746 CG11502-PA 319..450 355..501 196 40.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:16:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19610-PA 589 GI19610-PA 358..589 345..582 1121 92.9 Plus
Dmoj\GI19610-PA 589 GI19610-PA 45..258 16..219 737 73.1 Plus
Dmoj\GI17531-PA 736 GI17531-PA 540..727 382..580 443 46.2 Plus
Dmoj\GI10282-PA 812 GI10282-PA 335..524 382..579 386 42.4 Plus
Dmoj\GI22125-PA 450 GI22125-PA 34..119 111..195 328 66.3 Plus
Dmoj\GI17531-PA 736 GI17531-PA 9..95 107..190 324 66.7 Plus
Dmoj\GI20211-PA 487 GI20211-PA 11..458 75..561 324 26.1 Plus
Dmoj\GI10282-PA 812 GI10282-PA 196..272 111..188 292 65.4 Plus
Dmoj\GI22125-PA 450 GI22125-PA 228..445 382..580 249 28.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:16:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17753-PA 259 GL17753-PA 23..259 345..582 1253 97.5 Plus
Dper\GL17752-PA 333 GL17752-PA 36..264 4..219 798 75 Plus
Dper\GL19043-PA 819 GL19043-PA 621..808 382..580 440 46.2 Plus
Dper\GL22274-PA 777 GL22274-PA 315..524 355..579 385 40.9 Plus
Dper\GL13521-PA 454 GL13521-PA 34..119 111..195 328 66.3 Plus
Dper\GL19043-PA 819 GL19043-PA 137..223 107..190 322 66.7 Plus
Dper\GL22274-PA 777 GL22274-PA 196..272 111..188 292 65.4 Plus
Dper\GL13521-PA 454 GL13521-PA 232..449 382..580 242 28.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:16:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30480-PA 626 GA30480-PA 50..626 3..582 2377 88.9 Plus
Dpse\GA21482-PA 691 GA21482-PA 493..680 382..580 446 46.2 Plus
Dpse\GA11038-PA 777 GA11038-PA 315..524 355..579 386 40.9 Plus
Dpse\GA12521-PA 454 GA12521-PA 34..119 111..195 328 66.3 Plus
Dpse\GA21482-PA 691 GA21482-PA 9..95 107..190 322 66.7 Plus
Dpse\GA17350-PA 487 GA17350-PA 11..458 75..561 321 26.7 Plus
Dpse\GA11038-PA 777 GA11038-PA 196..272 111..188 293 65.4 Plus
Dpse\GA12521-PA 454 GA12521-PA 232..449 382..580 242 28.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:16:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21604-PA 642 GM21604-PA 186..629 15..408 1055 60.1 Plus
Dsec\GM18580-PA 196 GM18580-PA 4..187 386..580 419 46.7 Plus
Dsec\GM18579-PA 184 GM18579-PA 9..95 107..190 308 66.7 Plus
Dsec\GM10889-PA 278 GM10889-PA 7..90 111..194 286 61.9 Plus
Dsec\GM18927-PA 505 GM18927-PA 100..183 110..192 269 54.1 Plus
Dsec\GM18927-PA 505 GM18927-PA 286..483 392..571 220 29.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:16:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11109-PA 414 GD11109-PA 36..414 225..582 1279 68.3 Plus
Dsim\GD11109-PA 414 GD11109-PA 15..180 15..180 881 96.4 Plus
Dsim\GD18809-PA 680 GD18809-PA 319..528 355..579 391 40.9 Plus
Dsim\GD21550-PA 452 GD21550-PA 34..119 111..195 329 66.3 Plus
Dsim\GD23369-PA 468 GD23369-PA 9..95 107..190 306 66.7 Plus
Dsim\GD18809-PA 680 GD18809-PA 200..276 111..188 290 65.4 Plus
Dsim\GD19868-PA 278 GD19868-PA 7..86 111..190 285 65 Plus
Dsim\GD21550-PA 452 GD21550-PA 230..447 382..580 254 28.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:16:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14974-PA 577 GJ14974-PA 1..577 1..582 2307 83.7 Plus
Dvir\GJ15408-PA 726 GJ15408-PA 530..717 382..580 445 46.2 Plus
Dvir\GJ11090-PA 787 GJ11090-PA 334..523 382..579 387 42.4 Plus
Dvir\GJ20161-PA 487 GJ20161-PA 11..458 75..561 332 26.3 Plus
Dvir\tll-PA 450 GJ24246-PA 34..175 111..258 330 48.7 Plus
Dvir\GJ15408-PA 726 GJ15408-PA 9..95 107..190 325 66.7 Plus
Dvir\GJ11090-PA 787 GJ11090-PA 195..271 111..188 293 65.4 Plus
Dvir\tll-PA 450 GJ24246-PA 228..445 382..580 249 28.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:16:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20892-PA 573 GK20892-PA 5..573 20..582 2115 81.2 Plus
Dwil\GK14705-PA 730 GK14705-PA 534..721 382..580 445 46.2 Plus
Dwil\GK11542-PA 835 GK11542-PA 317..526 355..579 385 40.9 Plus
Dwil\GK18019-PA 524 GK18019-PA 10..460 68..561 333 26 Plus
Dwil\GK14705-PA 730 GK14705-PA 9..95 107..190 327 66.7 Plus
Dwil\GK14159-PA 457 GK14159-PA 34..119 111..195 326 66.3 Plus
Dwil\GK11542-PA 835 GK11542-PA 198..274 111..188 294 65.4 Plus
Dwil\GK14159-PA 457 GK14159-PA 235..452 382..580 243 28.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13645-PA 654 GE13645-PA 91..654 14..582 2232 75.5 Plus
Dyak\GE25723-PA 691 GE25723-PA 495..682 382..580 443 46.2 Plus
Dyak\GE26169-PA 543 GE26169-PA 319..528 355..579 387 40.9 Plus
Dyak\GE10907-PA 452 GE10907-PA 34..119 111..195 329 66.3 Plus
Dyak\GE25723-PA 691 GE25723-PA 9..95 107..190 324 66.7 Plus
Dyak\GE21721-PA 487 GE21721-PA 11..458 75..561 320 26.6 Plus
Dyak\GE26169-PA 543 GE26169-PA 200..276 111..188 290 65.4 Plus
Dyak\GE10907-PA 452 GE10907-PA 230..447 382..580 248 27.8 Plus

RT06950.hyp Sequence

Translation from 1 to 1746

> RT06950.hyp
MNKEENSSETRPSSQELHSPQRHCYTPPPAPMHGQAPPPTSTGVAPPTQP
PPPHPAAPNVPNGRLLSWNHSAAAAAAAAAAQAAANSMNHSSAAEGSSMT
RIKGQNLGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAG
TGRCVVDKAHRNQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETLR
EMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSLGSLPTGRLLHH
NHLTSSMQLAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHST
NSSSNHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMENDNDDDSIDVT
NDNEEPHAVSRSDSSFIMPQFMSPNLYTHQHETVYETSARLLFMAVKWAK
NLPSFARLSFRDQVILLEESWSELFLLNAIQWCIPLDPTGCALFSVAEHC
NNLENNANGDTCITKEELAADVRTLHEIFCKYKAVLVDPAEFACLKAIVL
FRPETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLL
RMISSHKIESIYFQRTIGNTPMEKVLCDMYKN

RT06950.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:04
Subject Length Description Subject Range Query Range Score Percent Strand
Hr51-PC 582 CG16801-PC 1..582 1..582 3082 100 Plus
dsf-PB 691 CG9019-PB 333..682 210..580 462 33.1 Plus
dsf-PA 691 CG9019-PA 333..682 210..580 462 33.1 Plus
svp-PC 281 CG11502-PC 57..266 355..579 364 40.9 Plus
svp-PB 543 CG11502-PB 319..528 355..579 364 40.9 Plus
dsf-PB 691 CG9019-PB 9..183 107..314 336 39.3 Plus
dsf-PA 691 CG9019-PA 9..183 107..314 336 39.3 Plus

RT06950.hyp2 Sequence

Translation from 1 to 1748

> RT06950.hyp2
MNKEENSSETRPSSQELHSPQRHCYTPPPAPMHGQAPPPTSTGVAPPTQP
PPPHPAAPNVPNGRLLSWNHSAAAAAAAAAAQAAANSMNHSSAAEGSSMT
RIKGQNLGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAG
TGRCVVDKAHRNQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETLR
EMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSLGSLPTGRLLHH
NHLTSSMQLAANHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHST
NSSSNHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMENDNDDDSIDVT
NDNEEPHAVSRSDSSFIMPQFMSPNLYTHQHETVYETSARLLFMAVKWAK
NLPSFARLSFRDQVILLEESWSELFLLNAIQWCIPLDPTGCALFSVAEHC
NNLENNANGDTCITKEELAADVRTLHEIFCKYKAVLVDPAEFACLKAIVL
FRPETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLL
RMISSHKIESIYFQRTIGNTPMEKVLCDMYKN*

RT06950.hyp2 Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:50
Subject Length Description Subject Range Query Range Score Percent Strand
Hr51-PC 582 CG16801-PC 1..582 1..582 3082 100 Plus
dsf-PB 691 CG9019-PB 333..682 210..580 462 33.1 Plus
dsf-PA 691 CG9019-PA 333..682 210..580 462 33.1 Plus
svp-PC 281 CG11502-PC 57..266 355..579 364 40.9 Plus
svp-PB 543 CG11502-PB 319..528 355..579 364 40.9 Plus
svp-PE 554 CG11502-PE 319..528 355..579 364 40.9 Plus
Hr3-PC 694 CG33183-PC 189..665 40..561 346 27.4 Plus
Hr3-PI 871 CG33183-PI 366..842 40..561 346 27.4 Plus
dsf-PB 691 CG9019-PB 9..183 107..314 336 39.3 Plus
dsf-PA 691 CG9019-PA 9..183 107..314 336 39.3 Plus
Hr39-PD 808 CG8676-PD 278..777 6..551 336 26.1 Plus
Hr39-PA 808 CG8676-PA 278..777 6..551 336 26.1 Plus
Hr39-PB 808 CG8676-PB 278..777 6..551 336 26.1 Plus
ftz-f1-PC 803 CG4059-PC 228..796 50..579 321 22.7 Plus
ftz-f1-PA 803 CG4059-PA 228..796 50..579 321 22.7 Plus
ftz-f1-PB 1027 CG4059-PB 452..1020 50..579 321 22.7 Plus
tll-PA 452 CG1378-PA 34..195 111..250 316 45.1 Plus
Hr3-PF 487 CG33183-PF 11..458 75..561 309 26.4 Plus
Hr3-PA 487 CG33183-PA 11..458 75..561 309 26.4 Plus
Hr3-PH 529 CG33183-PH 11..458 75..561 309 26.4 Plus
svp-PB 543 CG11502-PB 178..276 85..188 293 56.7 Plus
svp-PE 554 CG11502-PE 178..276 85..188 293 56.7 Plus
svp-PA 746 CG11502-PA 178..276 85..188 293 56.7 Plus
Hr3-PD 456 CG33183-PD 22..427 111..561 290 26.9 Plus
Hr83-PA 278 CG10296-PA 7..86 111..190 285 65 Plus
Eip75B-PF 1412 CG8127-PF 387..571 33..225 277 31 Plus
Eip75B-PE 1412 CG8127-PE 387..571 33..225 277 31 Plus
Eip75B-PB 1412 CG8127-PB 387..571 33..225 277 31 Plus
usp-PB 508 CG4380-PB 18..186 9..192 274 34.4 Plus
usp-PA 508 CG4380-PA 18..186 9..192 274 34.4 Plus
Hr78-PF 601 CG7199-PF 51..128 110..188 274 58.2 Plus
Hr78-PE 601 CG7199-PE 51..128 110..188 274 58.2 Plus
Hr78-PB 601 CG7199-PB 51..128 110..188 274 58.2 Plus
Hr78-PD 601 CG7199-PD 51..128 110..188 274 58.2 Plus
Hr78-PC 601 CG7199-PC 51..128 110..188 274 58.2 Plus
Hnf4-PE 704 CG9310-PE 27..216 15..186 273 35 Plus
Hnf4-PA 704 CG9310-PA 27..216 15..186 273 35 Plus
Eip78C-PE 862 CG18023-PE 342..815 91..550 270 23.3 Plus
Eip78C-PD 862 CG18023-PD 342..815 91..550 270 23.3 Plus
Eip78C-PA 862 CG18023-PA 342..815 91..550 270 23.3 Plus
Hnf4-PF 666 CG9310-PF 43..178 62..186 269 40.9 Plus
Hnf4-PD 708 CG9310-PD 85..220 62..186 269 40.9 Plus
Hnf4-PB 732 CG9310-PB 109..244 62..186 269 40.9 Plus
Hr39-PC 701 CG8676-PC 278..664 6..428 267 26.7 Plus
Hr78-PA 599 CG7199-PA 51..126 110..188 254 57 Plus
Eip75B-PC 1199 CG8127-PC 225..358 91..225 245 35.6 Plus
Hr4-PC 1518 CG43934-PC 919..1005 109..194 245 47.7 Plus
Hr4-PD 1529 CG43934-PD 929..1015 109..194 245 47.7 Plus
Hr4-PF 1611 CG43934-PF 1012..1098 109..194 245 47.7 Plus
Hr4-PE 1842 CG43934-PE 1243..1329 109..194 245 47.7 Plus
Hr4-PK 1843 CG43934-PK 1243..1329 109..194 245 47.7 Plus
Hr4-PJ 1843 CG43934-PJ 1243..1329 109..194 245 47.7 Plus
Hr4-PH 1863 CG43934-PH 919..1005 109..194 245 47.7 Plus
Hr4-PG 1986 CG43934-PG 1386..1472 109..194 245 47.7 Plus
Hr4-PI 2123 CG43934-PI 919..1005 109..194 245 47.7 Plus
usp-PB 508 CG4380-PB 289..493 392..578 240 30.6 Plus
usp-PA 508 CG4380-PA 289..493 392..578 240 30.6 Plus
tll-PA 452 CG1378-PA 223..447 373..580 229 28.5 Plus
Hnf4-PE 704 CG9310-PE 275..466 384..579 213 31 Plus
Hnf4-PA 704 CG9310-PA 275..466 384..579 213 31 Plus
Hnf4-PF 666 CG9310-PF 237..428 384..579 213 31 Plus
Hnf4-PD 708 CG9310-PD 279..470 384..579 213 31 Plus
Hnf4-PB 732 CG9310-PB 303..494 384..579 213 31 Plus
svp-PA 746 CG11502-PA 319..450 355..501 196 40.1 Plus