BDGP Sequence Production Resources |
Search the DGRC for RT07316
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 73 |
Well: | 16 |
Vector: | pCR2.1 |
Associated Gene/Transcript | CG34185-RA |
Protein status: | RT07316.pep: gold |
Sequenced Size: | 381 |
381 bp assembled on 2010-04-26
GenBank Submission: BT124813.1
> RT07316.complete ATGAACCAGTTAACCTTTGTATGCTGCCTTTTGTTGTGGTCCGGGTCTCA GGCTGCGTTCCAGGACTTTGTGATTGGACCTGAATCCTATGAAGGTGGTA ACGATGTCGTCCCGTTTGGTCAAGAATTATCGGATGAGGTGGATGAGGAT ATAATGGTGTCATTCCAGGATGTACAGCATGATGGAATAGTGGATACCAA TCTACTGATGAAAGCTATAATGCAGCATGCCAAACGTTTGGGCATGAGCC TGGATGAACTTGCTAGCTTAAATGTGCAGTCAGAAGATGAGGAATCTATG AACCAACTTGGGTGCTCAGCTGAGCAAGACGTCTTCGGATACCCAGAAAA GCCCACTTGGCGGGACGTACTCTTTAACTGA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 10261318..10261495 | 262..85 | 890 | 100 | Minus |
chr2R | 21145070 | chr2R | 10261141..10261259 | 380..262 | 595 | 100 | Minus |
chr2R | 21145070 | chr2R | 10261554..10261637 | 84..1 | 420 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 14374014..14374191 | 262..85 | 890 | 100 | Minus |
2R | 25286936 | 2R | 14373836..14373955 | 381..262 | 600 | 100 | Minus |
2R | 25286936 | 2R | 14374250..14374333 | 84..1 | 420 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 14375213..14375390 | 262..85 | 890 | 100 | Minus |
2R | 25260384 | 2R | 14375035..14375154 | 381..262 | 600 | 100 | Minus |
2R | 25260384 | 2R | 14375449..14375532 | 84..1 | 420 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10261318..10261495 | 85..262 | 100 | <- | Minus |
chr2R | 10261554..10261637 | 1..84 | 100 | Minus | |
chr2R | 10261141..10261258 | 263..380 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34185-RA | 1..380 | 1..380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34185-RA | 1..380 | 1..380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34185-RA | 1..381 | 1..381 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34185-RA | 1..381 | 1..381 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34185-RA | 1..380 | 1..380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34185-RA | 1..380 | 1..380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34185-RA | 63..442 | 1..380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34185-RA | 63..442 | 1..380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14373837..14373954 | 263..380 | 100 | <- | Minus |
2R | 14374014..14374191 | 85..262 | 100 | <- | Minus |
2R | 14374250..14374333 | 1..84 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14373837..14373954 | 263..380 | 100 | <- | Minus |
2R | 14374014..14374191 | 85..262 | 100 | <- | Minus |
2R | 14374250..14374333 | 1..84 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14373837..14373954 | 263..380 | 100 | <- | Minus |
2R | 14374014..14374191 | 85..262 | 100 | <- | Minus |
2R | 14374250..14374333 | 1..84 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10261342..10261459 | 263..380 | 100 | <- | Minus |
arm_2R | 10261519..10261696 | 85..262 | 100 | <- | Minus |
arm_2R | 10261755..10261838 | 1..84 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14375036..14375153 | 263..380 | 100 | <- | Minus |
2R | 14375213..14375390 | 85..262 | 100 | <- | Minus |
2R | 14375449..14375532 | 1..84 | 100 | Minus |
Translation from 0 to 380
> RT07316.pep MNQLTFVCCLLLWSGSQAAFQDFVIGPESYEGGNDVVPFGQELSDEVDED IMVSFQDVQHDGIVDTNLLMKAIMQHAKRLGMSLDELASLNVQSEDEESM NQLGCSAEQDVFGYPEKPTWRDVLFN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11353-PA | 127 | GF11353-PA | 1..127 | 1..126 | 374 | 57.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22426-PA | 126 | GG22426-PA | 1..126 | 1..126 | 576 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22121-PA | 135 | GH22121-PA | 3..135 | 2..126 | 182 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34185-PA | 126 | CG34185-PA | 1..126 | 1..126 | 662 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11402-PA | 168 | GL11402-PA | 31..168 | 1..126 | 339 | 52.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24710-PA | 168 | GA24710-PA | 31..168 | 1..126 | 341 | 52.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20214-PA | 126 | GM20214-PA | 1..126 | 1..126 | 609 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25685-PA | 90 | GD25685-PA | 1..88 | 1..88 | 417 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20333-PA | 128 | GJ20333-PA | 1..128 | 1..126 | 230 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12316-PA | 94 | GE12316-PA | 1..88 | 1..88 | 380 | 80.7 | Plus |
Translation from 1 to 378
> RT07316.hyp MNQLTFVCCLLLWSGSQAAFQDFVIGPESYEGGNDVVPFGQELSDEVDED IMVSFQDVQHDGIVDTNLLMKAIMQHAKRLGMSLDELASLNVQSEDEESM NQLGCSAEQDVFGYPEKPTWRDVLFN
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34185-PA | 126 | CG34185-PA | 1..126 | 1..126 | 662 | 100 | Plus |