BDGP Sequence Production Resources |
Search the DGRC for RT07379
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 73 |
Well: | 79 |
Vector: | pCR2.1 |
Associated Gene/Transcript | CG13653-RA |
Protein status: | RT07379.pep: gold |
Sequenced Size: | 937 |
937 bp assembled on 2010-04-27
GenBank Submission: BT124843.1
> RT07379.complete CACAACCACCGAACGAAGCACATCGATCTGAAGATGCAGTTGGGAAAAGC TATCATTCTGATTTTGCTGGCGGCCATCCAGCAAAGCTGCCTGGCTCTCT ACATCAAGAGCGCGGAGAAGAATCCAGCCAAGACTGGGCCCAAGGACGAT TGGGGCGTCTTCAAGAACACACTCGGACTAAGCCAAGAAAAAGTTGAACT GCTAAAATCGCAAAAGGACCAACAAGGCACTAAGGAGCTGCTCAATCGAT TCATTCTGGAGAACCCAAAGGCACTGCCGAAGGCCAAGCCACAACCCGAT CAGTTCATGGGACTCTACAGATCCATCCTGAAGAAGCTGACGGCATCCAA GCGCATGCTGAAGACCTCGTTGAACTTTGAACTGGCCGACAGGCCACACA AGACCCTAAAAAGGCCGCGCCGTAAGATCGCCGTCAAGATGGTTTCCGAT ATGCCATCATGGAAGATCGAGAGCCTGCTGAACTCATTCTATCTGAAGCA CGGAATTCCACGCAACGCCGAGGAGCACGATTATCCCGATCTTGACATGG CCAGGGATACTGATTACGAATCCGATAATTTCTACGACGACGAGGGAGAT GTGGGTCTAACGGCCAAGACGCGCCAGAACACTGAGTACGGATCCTTCCA GGACCTCATTATGCAGGCCAAGATGAACGAGTGGGAGCGGGAGAGCGAAG AAACCAAATTGCACGGCCCCGACAATGATGACTACATCTAAATCCCTAGA CTATCGATGATGGAGGGCTGTGCAATAGAGGTTCATATGCTGGCATTGGA CTTGTCTTTAGGCTAGAGTAGTTTATAATGCCAGAAACGCGCTTTAAATC AAACGATTGTTTGAGTATTTATTAACATAGCATAGCATATAACTTTCATA TTTTTTTTTCAACATGAAAATTATAAATAAAGTGACT
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Paris | 1730 | Dvir\Paris TV1 1730bp Derived from Z49253. | 329..375 | 231..185 | 109 | 70.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21018611..21018803 | 1..193 | 100 | -> | Plus |
chr3R | 21018872..21019616 | 194..937 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13653-RA | 1..708 | 34..741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13653-RA | 1..708 | 34..741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13653-RA | 1..708 | 34..741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13653-RA | 1..708 | 34..741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13653-RA | 1..708 | 34..741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13653-RA | 1..708 | 34..741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13653-RA | 1..937 | 1..937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13653-RA | 1..937 | 1..937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25195527..25195719 | 1..193 | 100 | -> | Plus |
3R | 25195788..25196531 | 194..937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25195527..25195719 | 1..193 | 100 | -> | Plus |
3R | 25195788..25196531 | 194..937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25195527..25195719 | 1..193 | 100 | -> | Plus |
3R | 25195788..25196531 | 194..937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21021249..21021441 | 1..193 | 100 | -> | Plus |
arm_3R | 21021510..21022253 | 194..937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24936619..24937362 | 194..937 | 100 | Plus | |
3R | 24936358..24936550 | 1..193 | 100 | -> | Plus |
Translation from 0 to 740
> RT07379.hyp HNHRTKHIDLKMQLGKAIILILLAAIQQSCLALYIKSAEKNPAKTGPKDD WGVFKNTLGLSQEKVELLKSQKDQQGTKELLNRFILENPKALPKAKPQPD QFMGLYRSILKKLTASKRMLKTSLNFELADRPHKTLKRPRRKIAVKMVSD MPSWKIESLLNSFYLKHGIPRNAEEHDYPDLDMARDTDYESDNFYDDEGD VGLTAKTRQNTEYGSFQDLIMQAKMNEWERESEETKLHGPDNDDYI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13653-PA | 235 | CG13653-PA | 1..235 | 12..246 | 1223 | 100 | Plus |
Translation from 0 to 740
> RT07379.pep HNHRTKHIDLKMQLGKAIILILLAAIQQSCLALYIKSAEKNPAKTGPKDD WGVFKNTLGLSQEKVELLKSQKDQQGTKELLNRFILENPKALPKAKPQPD QFMGLYRSILKKLTASKRMLKTSLNFELADRPHKTLKRPRRKIAVKMVSD MPSWKIESLLNSFYLKHGIPRNAEEHDYPDLDMARDTDYESDNFYDDEGD VGLTAKTRQNTEYGSFQDLIMQAKMNEWERESEETKLHGPDNDDYI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17897-PA | 244 | GF17897-PA | 1..244 | 12..246 | 903 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11372-PA | 234 | GG11372-PA | 1..234 | 12..246 | 1197 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19570-PA | 272 | GH19570-PA | 1..272 | 12..246 | 617 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13653-PA | 235 | CG13653-PA | 1..235 | 12..246 | 1223 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23867-PA | 270 | GI23867-PA | 43..270 | 49..246 | 522 | 50.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21911-PA | 255 | GL21911-PA | 4..255 | 17..246 | 721 | 59.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27976-PA | 249 | GA27976-PA | 4..249 | 17..246 | 736 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17815-PA | 235 | GM17815-PA | 1..235 | 12..246 | 1235 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21184-PA | 235 | GD21184-PA | 1..235 | 12..246 | 1227 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23605-PA | 262 | GJ23605-PA | 1..262 | 12..246 | 658 | 50.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13893-PA | 249 | GK13893-PA | 7..249 | 17..246 | 686 | 58.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23569-PA | 236 | GE23569-PA | 1..236 | 12..246 | 1075 | 92.4 | Plus |