RT07511.complete Sequence
321 bp assembled on 2010-04-26
GenBank Submission: BT124793.1
> RT07511.complete
ATGAAGTACCTTTCATTGTCTTTCCTATTGTGCTGCCTGGTGGCCGGAGT
GTTGAGTGCCCCCCAGTTTGGATATGGATTCGCACCATATGGAGGATACG
GAGGATACGGAGGATATGGAGGAAGCTATGCCTCCGCCTCTGCCAGCAGC
AGTGCGGGAGGATATCAAGGATTCGGATACCCAGGATACGGGGGATATGG
AGGATACGGAGGATTTGGTGGAGGATACGGTGGAGGCTATGGGCAGCAAT
ACAACCAGTTTAGCAACTACAACAACTACGGATCTTCTGGCTACTACGGC
GGTTACCCATTCGGCAGATGA
RT07511.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:48:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34281-RA | 321 | CG34281-RA | 1..321 | 1..321 | 1605 | 100 | Plus |
CG14327.a | 579 | CG14327.a | 64..299 | 1..236 | 1180 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:12:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 13437309..13437624 | 5..320 | 1565 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:12:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17612975..17613291 | 5..321 | 1585 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:45:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 17353806..17354122 | 5..321 | 1585 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 17:12:46 has no hits.
RT07511.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed on 2019-03-15 17:13:40 has no hits.
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-04-26 12:14:09 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34281-RA | 1..320 | 1..320 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:30:17 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34281-RA | 1..320 | 1..320 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:28:38 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34281-RA | 1..321 | 1..321 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:28:36 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34281-RA | 1..321 | 1..321 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-26 12:14:08 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34281-RA | 1..320 | 1..320 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:30:16 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34281-RA | 1..320 | 1..320 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:28:38 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34281-RA | 1..320 | 1..320 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:28:36 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34281-RA | 15..334 | 1..320 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:13:40 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17612969..17613290 | 1..320 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:13:40 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17612969..17613290 | 1..320 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:13:40 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17612969..17613290 | 1..320 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:28:38 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13438691..13439012 | 1..320 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:15:32 Download gff for
RT07511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17353800..17354121 | 1..320 | 99 | | Plus |
RT07511.pep Sequence
Translation from 0 to 320
> RT07511.pep
MKYLSLSFLLCCLVAGVLSAPQFGYGFAPYGGYGGYGGYGGSYASASASS
SAGGYQGFGYPGYGGYGGYGGFGGGYGGGYGQQYNQFSNYNNYGSSGYYG
GYPFGR*
RT07511.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34281-PA | 106 | CG34281-PA | 1..106 | 1..106 | 604 | 100 | Plus |
CG8157-PB | 113 | CG8157-PB | 1..94 | 4..101 | 166 | 42.7 | Plus |
CG8157-PA | 113 | CG8157-PA | 1..94 | 4..101 | 166 | 42.7 | Plus |
Edg91-PB | 151 | CG7539-PB | 41..144 | 24..105 | 160 | 42.9 | Plus |
Edg91-PA | 159 | CG7539-PA | 49..152 | 24..105 | 160 | 42.9 | Plus |
CG9269-PA | 146 | CG9269-PA | 44..118 | 29..105 | 158 | 48.8 | Plus |
CG9877-PA | 88 | CG9877-PA | 17..86 | 14..80 | 152 | 47.5 | Plus |
Edg91-PB | 151 | CG7539-PB | 58..141 | 16..101 | 151 | 45.7 | Plus |
Edg91-PA | 159 | CG7539-PA | 66..149 | 16..101 | 151 | 45.7 | Plus |
CG5172-PD | 172 | CG5172-PD | 1..120 | 1..101 | 150 | 35.2 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 304..356 | 26..81 | 150 | 55.4 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 304..356 | 26..81 | 150 | 55.4 | Plus |
CG15597-PB | 149 | CG15597-PB | 8..124 | 4..105 | 149 | 39 | Plus |
CG14191-PA | 193 | CG14191-PA | 41..124 | 24..105 | 148 | 40.8 | Plus |
CG9269-PA | 146 | CG9269-PA | 49..142 | 30..105 | 147 | 42.6 | Plus |
CG7294-PA | 127 | CG7294-PA | 6..83 | 9..101 | 147 | 42.6 | Plus |
Edg91-PB | 151 | CG7539-PB | 50..139 | 23..105 | 146 | 41.4 | Plus |
Edg91-PA | 159 | CG7539-PA | 58..147 | 23..105 | 146 | 41.4 | Plus |
CG14191-PA | 193 | CG14191-PA | 92..180 | 24..101 | 146 | 39 | Plus |
sqd-PA | 321 | CG16901-PA | 219..309 | 13..99 | 146 | 42.7 | Plus |
Edg91-PB | 151 | CG7539-PB | 28..86 | 37..102 | 145 | 47 | Plus |
Edg91-PA | 159 | CG7539-PA | 36..94 | 37..102 | 145 | 47 | Plus |
CG17105-PB | 103 | CG17105-PB | 1..103 | 1..100 | 145 | 38.7 | Plus |
CG17105-PA | 103 | CG17105-PA | 1..103 | 1..100 | 145 | 38.7 | Plus |
CG9757-PB | 127 | CG9757-PB | 46..123 | 20..101 | 145 | 45.2 | Plus |
CG9757-PA | 127 | CG9757-PA | 46..123 | 20..101 | 145 | 45.2 | Plus |
sqd-PD | 178 | CG16901-PD | 53..134 | 13..105 | 145 | 39.8 | Plus |
CG2157-PA | 245 | CG2157-PA | 79..193 | 24..104 | 145 | 37.4 | Plus |
sqd-PB | 344 | CG16901-PB | 219..300 | 13..105 | 145 | 39.8 | Plus |
CG8160-PA | 212 | CG8160-PA | 27..115 | 22..100 | 143 | 42.7 | Plus |
CG3588-PF | 631 | CG3588-PF | 554..630 | 24..97 | 143 | 39 | Plus |
CG3588-PH | 659 | CG3588-PH | 582..658 | 24..97 | 143 | 39 | Plus |
CG3588-PG | 659 | CG3588-PG | 582..658 | 24..97 | 143 | 39 | Plus |
CG3588-PI | 662 | CG3588-PI | 585..661 | 24..97 | 143 | 39 | Plus |
CG3588-PE | 891 | CG3588-PE | 582..658 | 24..97 | 143 | 39 | Plus |
TwdlT-PA | 286 | CG5812-PA | 43..120 | 24..101 | 142 | 40 | Plus |
Pex13-PA | 440 | CG4663-PA | 70..136 | 30..87 | 142 | 46.3 | Plus |
CG9083-PB | 317 | CG9083-PB | 172..266 | 30..105 | 141 | 40 | Plus |
Pex13-PA | 440 | CG4663-PA | 70..133 | 33..102 | 141 | 45.1 | Plus |
CG10598-PC | 173 | CG10598-PC | 74..161 | 31..102 | 140 | 40 | Plus |
CG10598-PA | 173 | CG10598-PA | 74..161 | 31..102 | 140 | 40 | Plus |
sqd-PC | 308 | CG16901-PC | 219..293 | 13..101 | 140 | 40.4 | Plus |
sqd-PE | 308 | CG16901-PE | 219..293 | 13..101 | 140 | 40.4 | Plus |
CG17738-PA | 110 | CG17738-PA | 51..105 | 22..81 | 138 | 52.2 | Plus |
CG9269-PA | 146 | CG9269-PA | 62..146 | 24..104 | 137 | 44.2 | Plus |
CG14191-PA | 193 | CG14191-PA | 55..137 | 24..105 | 137 | 42.9 | Plus |
CG17777-PC | 110 | CG17777-PC | 49..110 | 23..80 | 136 | 43.5 | Plus |
CG17777-PB | 110 | CG17777-PB | 49..110 | 23..80 | 136 | 43.5 | Plus |
CG5172-PC | 106 | CG5172-PC | 1..86 | 1..80 | 135 | 36.8 | Plus |
CG17777-PC | 110 | CG17777-PC | 47..102 | 25..104 | 133 | 43.8 | Plus |
CG17777-PB | 110 | CG17777-PB | 47..102 | 25..104 | 133 | 43.8 | Plus |
CG14563-PA | 122 | CG14563-PA | 26..122 | 19..100 | 133 | 40.8 | Plus |
RT07511.hyp Sequence
Translation from 0 to 318
> RT07511.hyp
SQYLSLSFLLCCLVAGVLSAPQFGYGFAPYGGYGGYGGYGGSYASASASS
SAGGYQGFGYPGYGGYGGYGGFGGGYGGGYGQQYNQFSNYNNYGSSGYYG
GYPFGR
RT07511.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:58:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34281-PA | 106 | CG34281-PA | 2..106 | 2..106 | 595 | 99 | Plus |
CG8157-PB | 113 | CG8157-PB | 1..94 | 4..101 | 166 | 42.7 | Plus |
CG8157-PA | 113 | CG8157-PA | 1..94 | 4..101 | 166 | 42.7 | Plus |
Edg91-PB | 151 | CG7539-PB | 41..144 | 24..105 | 160 | 42.9 | Plus |
Edg91-PA | 159 | CG7539-PA | 49..152 | 24..105 | 160 | 42.9 | Plus |
Edg91-PB | 151 | CG7539-PB | 58..141 | 16..101 | 151 | 45.7 | Plus |
Edg91-PB | 151 | CG7539-PB | 50..139 | 23..105 | 146 | 41.4 | Plus |
Edg91-PB | 151 | CG7539-PB | 28..86 | 37..102 | 145 | 47 | Plus |