BDGP Sequence Production Resources |
Search the DGRC for RT07725
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 77 |
Well: | 25 |
Vector: | pCR2.1 |
Associated Gene/Transcript | CG34144-RA |
Protein status: | RT07725.pep: wuzgold |
Sequenced Size: | 510 |
510 bp assembled on 2010-04-26
GenBank Submission: BT124805.1
> RT07725.complete ATGCCGGAAATACTGGATGCCATGGAAATGGAGGCGCCATCCGATGTTGT GGACATCTCTGCGCGGGAGACAGCTGTCAACGTTATAACCATCATCGATG CCAGCAGTATAAATAATAATAATAATAATAATAATAATAACAATAATAAT AGCAACAGTACAACCAATAATAACCACCACAACAGCGGCGAACCGGAAAC GGAAATCGGTGCAGTGCAGCTGCAGCAGCAGCAGCAGCAACAACAACAAC AGCTGCATCTTCAGCCGGCTTCGAATTTCGTTGCCATTCCATTGTTGGAA CGACGGCGTCGCAGTCACTGCCGCATCGCCCCCTTGGCGCCGATCATCTG CATCCAGAACGGATCGCATCCGGAGGAGCTCGTCCGCTTGTCCCGCTCGC GATCGTGCTTCCTTCGCATACGCAGGACCTTCATCAAACTTTTTGGCAAA ATCATGGGCAGCAATAATCCCAGCGAAGCGGATCGATACGACTATTATGA CTGTGAGTAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34144-RA | 709 | CG34144-RA | 135..644 | 1..510 | 2550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11189022..11189408 | 439..59 | 1810 | 98.4 | Minus |
chrX | 22417052 | chrX | 11188485..11188553 | 508..440 | 345 | 100 | Minus |
chrX | 22417052 | chrX | 11193773..11193830 | 58..1 | 290 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2484 | 88..256 | 246 | 63.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2718..2841 | 145..268 | 195 | 65.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2298..2417 | 145..267 | 193 | 65.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2442 | 133..265 | 192 | 62.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6924 | 71..254 | 163 | 57.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2363 | 216..267 | 161 | 78.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6529..6583 | 213..265 | 135 | 74.5 | Plus |
TART-A | 13424 | TART-A 13424bp | 116..158 | 226..268 | 125 | 76.7 | Plus |
TART-A | 13424 | TART-A 13424bp | 11294..11336 | 226..268 | 125 | 76.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2881..2989 | 139..251 | 122 | 61.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2881..3001 | 148..269 | 121 | 58.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6438..6479 | 215..256 | 111 | 73.8 | Plus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 2587..2697 | 162..271 | 111 | 59.3 | Plus |
BS | 5142 | BS BS 5142bp | 2041..2078 | 225..262 | 109 | 76.3 | Plus |
TART-A | 13424 | TART-A 13424bp | 910..937 | 232..259 | 104 | 85.7 | Plus |
TART-A | 13424 | TART-A 13424bp | 12088..12115 | 232..259 | 104 | 85.7 | Plus |
TART-A | 13424 | TART-A 13424bp | 12875..12935 | 191..250 | 104 | 65.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11188483..11188553 | 440..510 | 100 | <- | Minus |
chrX | 11189022..11189408 | 59..439 | 98 | <- | Minus |
chrX | 11193773..11193830 | 1..58 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34144-RA | 1..508 | 1..508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34144-RA | 1..510 | 1..510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44422-RE | 1..510 | 1..510 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44422-RE | 1..510 | 1..510 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34144-RA | 1..508 | 1..508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34144-RA | 1..510 | 1..510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44422-RE | 135..644 | 1..510 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44422-RE | 135..644 | 1..510 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11297303..11297373 | 440..510 | 100 | <- | Minus |
X | 11297842..11298222 | 59..439 | 100 | <- | Minus |
X | 11302592..11302649 | 1..58 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11297303..11297373 | 440..510 | 100 | <- | Minus |
X | 11297842..11298222 | 59..439 | 100 | <- | Minus |
X | 11302592..11302649 | 1..58 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11297303..11297373 | 440..510 | 100 | <- | Minus |
X | 11297842..11298222 | 59..439 | 100 | <- | Minus |
X | 11302592..11302649 | 1..58 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11191336..11191406 | 440..510 | 100 | <- | Minus |
arm_X | 11191875..11192255 | 59..439 | 100 | <- | Minus |
arm_X | 11196625..11196682 | 1..58 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11305940..11306320 | 59..439 | 100 | <- | Minus |
X | 11310690..11310747 | 1..58 | 100 | Minus | |
X | 11305401..11305471 | 440..510 | 100 | <- | Minus |
Translation from 0 to 509
> RT07725.pep MPEILDAMEMEAPSDVVDISARETAVNVITIIDASSINNNNNNNNNNNNN SNSTTNNNHHNSGEPETEIGAVQLQQQQQQQQQQLHLQPASNFVAIPLLE RRRRSHCRIAPLAPIICIQNGSHPEELVRLSRSRSCFLRIRRTFIKLFGK IMGSNNPSEADRYDYYDCE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22356-PA | 296 | GF22356-PA | 123..211 | 89..167 | 346 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18866-PA | 162 | GG18866-PA | 1..162 | 1..169 | 537 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12225-PA | 254 | GH12225-PA | 115..195 | 92..167 | 283 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG44422-PE | 363 | CG44422-PE | 1..167 | 1..167 | 866 | 100 | Plus |
CG44422-PF | 673 | CG44422-PF | 1..167 | 1..167 | 866 | 100 | Plus |
Rbp9-PH | 439 | CG3151-PH | 63..125 | 20..82 | 148 | 46 | Plus |
Rbp9-PG | 439 | CG3151-PG | 63..125 | 20..82 | 148 | 46 | Plus |
Rbp9-PF | 439 | CG3151-PF | 63..125 | 20..82 | 148 | 46 | Plus |
Rbp9-PE | 439 | CG3151-PE | 63..125 | 20..82 | 148 | 46 | Plus |
Rbp9-PK | 444 | CG3151-PK | 63..125 | 20..82 | 148 | 46 | Plus |
Rbp9-PI | 444 | CG3151-PI | 63..125 | 20..82 | 148 | 46 | Plus |
Rbp9-PB | 444 | CG3151-PB | 63..125 | 20..82 | 148 | 46 | Plus |
Rbp9-PC | 444 | CG3151-PC | 63..125 | 20..82 | 148 | 46 | Plus |
Rbp9-PJ | 684 | CG3151-PJ | 63..125 | 20..82 | 148 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15756-PA | 197 | GI15756-PA | 93..169 | 92..162 | 273 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20297-PA | 178 | GL20297-PA | 1..178 | 1..169 | 404 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28722-PA | 182 | GA28722-PA | 1..182 | 1..169 | 390 | 63.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11252-PA | 166 | GM11252-PA | 1..166 | 1..169 | 543 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15996-PA | 157 | GD15996-PA | 1..157 | 10..169 | 506 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18615-PA | 175 | GJ18615-PA | 99..157 | 92..146 | 179 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16518-PA | 166 | GK16518-PA | 81..166 | 91..169 | 267 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17307-PA | 172 | GE17307-PA | 1..172 | 1..169 | 536 | 84.2 | Plus |
Translation from 1 to 507
> RT07725.hyp MPEILDAMEMEAPSDVVDISARETAVNVITIIDASSINNNNNNNNNNNNN SNSTTNNNHHNSGEPETEIGAVQLQQQQQQQQQQLHLQPASNFVAIPLLE RRRRSHCRIAPLAPIICIQNGSHPEELVRLSRSRSCFLRIRRTFIKLFGK IMGSNNPSEADRYDYYDCE
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG44422-PE | 363 | CG44422-PE | 1..167 | 1..167 | 866 | 100 | Plus |
CG44422-PF | 673 | CG44422-PF | 1..167 | 1..167 | 866 | 100 | Plus |
Rbp9-PH | 439 | CG3151-PH | 63..125 | 20..82 | 148 | 46 | Plus |
Rbp9-PG | 439 | CG3151-PG | 63..125 | 20..82 | 148 | 46 | Plus |
Rbp9-PF | 439 | CG3151-PF | 63..125 | 20..82 | 148 | 46 | Plus |