BDGP Sequence Production Resources |
Search the DGRC for RT07885
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 78 |
Well: | 85 |
Vector: | pCR2.1 |
Associated Gene/Transcript | CG33257-RA |
Protein status: | RT07885.pep: gold |
Sequenced Size: | 993 |
993 bp assembled on 2010-04-26
GenBank Submission: BT124801.1
> RT07885.complete ATGTACGGCCAAGGATTACGTTTTCTTCTCGCCCAGCTTGTTTTGGTGCT CCTTTTGTCCAATGCCTTGGGTCGCCTGCACAAGAGGAATGGCTATCACT ACCGACCGCAGCAACCGCCACCAATCCACCAAGGTGGTTACTTTGAGCCC CATCTGCCGGCAGTAGAGCCTCCCGAGCCAGAGAAGCCACAACATAGCAC CAAAAGCTACTACACCACATCGGGAGGTAGCTCCTCAGTTTCCAGCAAGG GATCCGGTGGCTATAGCATTGGCAGCGGCCTGCGTTCCATTGCCCAGGGA TCGGCGGATCAGGCTCACAGTGCAGTGACCAACCAGCATGCAGCTGCCAA GCAGGCGGCCTATATAGCCCAGAATACACTGGCCCAAGCGGCTTCTCAGG CGGCGGCCACTGCACAAGCGGCTCTGGTGGGCAAGCAGGTTGTTCTCCAG GAGTTGGAGCAGCAGGCAGCCGAGGCCCAAAGATCTCTGTCCCGTGAGCT AGAGCAACTGAAGGCGGCCAAGATCTCCGCGAGATTGGCACAGCAAACGG CACAAGCGGCGCATCATCACATATCCGTGCTCACAGCTGCGGTAAATAAT GCCAAATCCGTGGCCGAACAGGCTGAGCAAACCTCCACGGAGGTGAACAA TCAACTGGCCTCCCAATCCCAGATGGTGGGTCAGTCCAAGAACCGATTAG AGCAGGTTGAGGAGCAGTTGCACCAGGCGCGCGTAGACTATGCGGCCACC AAGGAGTCCGCCCTTAAGGCGGCCAATTCCGCAGCTGCGGCTCAGGTGAA TGCATCCAAGGCGGCCCAGCATGCCACGATCGGATTGCATGAGAGCACGA ATCCATCAGCCCACGGGCACGATGGTCAGGAGTTGGGTGGCGAGGAGGAG TCCTACGATGAGCACCTAGACACCAGTGGCGGGGAAGTGGGACACACTGG CGGAGGAGAGGAACTATCCGAACATATTCGAGCTCCATATTAG
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33257-RA | 1128 | CG33257-RA | 26..1018 | 1..993 | 4965 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16336084..16336129 | 1..46 | 100 | -> | Plus |
chr3L | 16336435..16337381 | 47..993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33257-RA | 1..993 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33257-RA | 1..993 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33257-RA | 1..993 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33257-RA | 1..993 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33257-RA | 1..993 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33257-RA | 1..993 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33257-RA | 1..993 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33257-RA | 1..993 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16346323..16346368 | 1..46 | 100 | -> | Plus |
3L | 16346674..16347620 | 47..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16346323..16346368 | 1..46 | 100 | -> | Plus |
3L | 16346674..16347620 | 47..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16346323..16346368 | 1..46 | 100 | -> | Plus |
3L | 16346674..16347620 | 47..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16339423..16339468 | 1..46 | 100 | -> | Plus |
arm_3L | 16339774..16340720 | 47..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16339774..16340720 | 47..993 | 100 | Plus | |
3L | 16339423..16339468 | 1..46 | 100 | -> | Plus |
Translation from 0 to 992
> RT07885.pep MYGQGLRFLLAQLVLVLLLSNALGRLHKRNGYHYRPQQPPPIHQGGYFEP HLPAVEPPEPEKPQHSTKSYYTTSGGSSSVSSKGSGGYSIGSGLRSIAQG SADQAHSAVTNQHAAAKQAAYIAQNTLAQAASQAAATAQAALVGKQVVLQ ELEQQAAEAQRSLSRELEQLKAAKISARLAQQTAQAAHHHISVLTAAVNN AKSVAEQAEQTSTEVNNQLASQSQMVGQSKNRLEQVEEQLHQARVDYAAT KESALKAANSAAAAQVNASKAAQHATIGLHESTNPSAHGHDGQELGGEEE SYDEHLDTSGGEVGHTGGGEELSEHIRAPY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24190-PA | 332 | GF24190-PA | 1..332 | 1..330 | 1165 | 85.3 | Plus |
Dana\GF16671-PA | 319 | GF16671-PA | 8..303 | 10..291 | 405 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15995-PA | 330 | GG15995-PA | 1..330 | 1..330 | 1628 | 97 | Plus |
Dere\GG17459-PA | 302 | GG17459-PA | 69..286 | 70..291 | 374 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15884-PA | 348 | GH15884-PA | 1..346 | 1..327 | 744 | 62.9 | Plus |
Dgri\GH14118-PA | 352 | GH14118-PA | 128..330 | 88..294 | 365 | 49.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33257-PA | 330 | CG33257-PA | 1..330 | 1..330 | 1655 | 100 | Plus |
CG11693-PB | 323 | CG11693-PB | 7..322 | 10..306 | 526 | 43.5 | Plus |
CG11693-PA | 318 | CG11693-PA | 16..317 | 24..306 | 519 | 44.2 | Plus |
CG14840-PA | 300 | CG14840-PA | 7..265 | 13..271 | 263 | 30.1 | Plus |
CG11694-PA | 261 | CG11694-PA | 41..249 | 76..277 | 235 | 31.6 | Plus |
CG14839-PA | 282 | CG14839-PA | 86..254 | 97..265 | 228 | 32.5 | Plus |
CG14354-PA | 298 | CG14354-PA | 67..239 | 96..268 | 217 | 30.6 | Plus |
CG34459-PC | 305 | CG34459-PC | 124..295 | 97..268 | 202 | 28.5 | Plus |
CG34459-PB | 305 | CG34459-PB | 124..295 | 97..268 | 202 | 28.5 | Plus |
CG34459-PA | 305 | CG34459-PA | 124..295 | 97..268 | 202 | 28.5 | Plus |
CG14841-PA | 274 | CG14841-PA | 48..262 | 59..270 | 199 | 28.4 | Plus |
CG12985-PA | 370 | CG12985-PA | 125..293 | 97..265 | 173 | 26.6 | Plus |
CG11698-PA | 262 | CG11698-PA | 54..222 | 97..265 | 155 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16535-PA | 326 | GI16535-PA | 1..323 | 1..323 | 797 | 69.9 | Plus |
Dmoj\GI10645-PA | 337 | GI10645-PA | 117..322 | 90..299 | 385 | 52.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17854-PA | 346 | GL17854-PA | 1..344 | 1..330 | 965 | 76.1 | Plus |
Dper\GL24120-PA | 338 | GL24120-PA | 119..321 | 88..294 | 347 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28516-PA | 346 | GA28516-PA | 1..344 | 1..330 | 964 | 75.8 | Plus |
Dpse\GA11145-PA | 334 | GA11145-PA | 115..317 | 88..294 | 349 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25626-PA | 330 | GM25626-PA | 1..330 | 1..330 | 1644 | 97.9 | Plus |
Dsec\GM26353-PA | 324 | GM26353-PA | 90..311 | 69..294 | 351 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14630-PA | 330 | GD14630-PA | 1..330 | 1..330 | 1654 | 98.2 | Plus |
Dsim\GD20875-PA | 318 | GD20875-PA | 103..310 | 88..299 | 351 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12787-PA | 325 | GJ12787-PA | 1..321 | 1..325 | 782 | 68.6 | Plus |
Dvir\GJ23002-PA | 327 | GJ23002-PA | 72..317 | 55..301 | 409 | 49.2 | Plus |
Dvir\GJ20562-PA | 352 | GJ20562-PA | 76..232 | 96..252 | 151 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14104-PA | 318 | GK14104-PA | 4..302 | 6..294 | 400 | 44.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23181-PA | 329 | GE23181-PA | 1..329 | 1..330 | 1601 | 96.4 | Plus |
Dyak\GE19559-PA | 329 | GE19559-PA | 1..329 | 1..330 | 1601 | 96.4 | Plus |
Dyak\GE24858-PA | 324 | GE24858-PA | 76..316 | 55..299 | 344 | 46.9 | Plus |
Translation from 1 to 992
> RT07885.hyp MYGQGLRFLLAQLVLVLLLSNALGRLHKRNGYHYRPQQPPPIHQGGYFEP HLPAVEPPEPEKPQHSTKSYYTTSGGSSSVSSKGSGGYSIGSGLRSIAQG SADQAHSAVTNQHAAAKQAAYIAQNTLAQAASQAAATAQAALVGKQVVLQ ELEQQAAEAQRSLSRELEQLKAAKISARLAQQTAQAAHHHISVLTAAVNN AKSVAEQAEQTSTEVNNQLASQSQMVGQSKNRLEQVEEQLHQARVDYAAT KESALKAANSAAAAQVNASKAAQHATIGLHESTNPSAHGHDGQELGGEEE SYDEHLDTSGGEVGHTGGGEELSEHIRAPY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33257-PA | 330 | CG33257-PA | 1..330 | 1..330 | 1655 | 100 | Plus |
CG11693-PB | 323 | CG11693-PB | 7..322 | 10..306 | 526 | 43.5 | Plus |
CG11693-PA | 318 | CG11693-PA | 16..317 | 24..306 | 519 | 44.2 | Plus |
CG14840-PA | 300 | CG14840-PA | 7..265 | 13..271 | 263 | 30.1 | Plus |
CG11694-PA | 261 | CG11694-PA | 41..249 | 76..277 | 235 | 31.6 | Plus |