BDGP Sequence Production Resources |
Search the DGRC for RT07968
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 79 |
Well: | 68 |
Vector: | pCR2.1 |
Associated Gene/Transcript | CG34022-RA |
Protein status: | RT07968.pep: wuzgold |
Sequenced Size: | 845 |
845 bp assembled on 2010-04-26
GenBank Submission: BT124812.1
> RT07968.complete GTCAGCTTCGATACTCGAACTCGTATTCGCATCCATGCAGACTTCCAACT AACATATGTTATCCATGTCCATGTCACATTAGGCAATGTTTGACAGCCGC CAATCCGCAACATTGTAAGATGGGCAACCGCATTGCATCCAGTAGAGGCG CCGATGGAGCTGGCGAGGGAGCCGCCGGCGAGGGTAACTCCAGGTTCAAT ACCCGCCGCCGATATCAGCAGCACAAGAGGGAATACTGTCTGCAGAACGA GTACCGATCGAAGACCCTGCCCGCCCGCCATCCGCACCACAGTGATCCCC ACCAGAGCCACCAGAAGTGCAGCGCCCAGGAGCGACTGGGCTCGAGCAGT TGCTTGGGAGCTGGCCAGAATGCATCCAACAACGCAACGCCGCACAATGG AGAGACGTCGAGGGTGCTCTTTCTGCTCTACTTGATTCACCGCACCTGGA ACGTGGTCATGGACACGATGGACTCACGCACCAAGAGTCGTTCGGCTAGA GGGAATTCCCCTCAAAAAGAGGGGCCCGTGGATATTGAACTCCAGCCGCG GGTTCTGGATGAGGAATGCTCCATTGGCATCACCGACTTGGACGCCTCAT CGTTCTGCTCCCAGTACTCGTGCTGCAGCTGCAGCTACTGTGATGTGGAA ACCACTGGGACCCAGACCAATGTCTACAGCTCAATAGGCGACGACTTTTC CCTGGACTCCATGTTCGAGGCGGGAAAGTCGATGGTTGACAGGTGAGCAA AGCTACAGACTATTCAAACCCCTTAGCCACGTAGCAGGCAGCTTTTGTCA GAGGTTGATGGGAGACGCATTGCATACTTTCAGGCCGAACGAAGT
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1205465..1205951 | 1..487 | 99 | -> | Plus |
chr3L | 1206050..1206407 | 488..845 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34022-RA | 1..627 | 120..746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34022-RA | 1..627 | 120..746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mwh-RB | 1..631 | 120..754 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mwh-RB | 1..631 | 120..754 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34022-RA | 1..627 | 120..746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34022-RA | 1..627 | 120..746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mwh-RB | 530..1198 | 82..754 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mwh-RB | 530..1198 | 82..754 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1205946..1206432 | 1..487 | 100 | -> | Plus |
3L | 1206531..1206888 | 488..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1205946..1206432 | 1..487 | 100 | -> | Plus |
3L | 1206531..1206888 | 488..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1205946..1206432 | 1..487 | 100 | -> | Plus |
3L | 1206531..1206888 | 488..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1205946..1206432 | 1..487 | 100 | -> | Plus |
arm_3L | 1206531..1206888 | 488..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1205946..1206432 | 1..487 | 100 | -> | Plus |
3L | 1206531..1206888 | 488..845 | 100 | Plus |
Translation from 2 to 745
> RT07968.pep QLRYSNSYSHPCRLPTNICYPCPCHIRQCLTAANPQHCKMGNRIASSRGA DGAGEGAAGEGNSRFNTRRRYQQHKREYCLQNEYRSKTLPARHPHHSDPH QSHQKCSAQERLGSSSCLGAGQNASNNATPHNGETSRVLFLLYLIHRTWN VVMDTMDSRTKSRSARGNSPQKEGPVDIELQPRVLDEECSIGITDLDASS FCSQYSCCSCSYCDVETTGTQTNVYSSIGDDFSLDSMFEAGKSMVDR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24434-PA | 202 | GF24434-PA | 1..202 | 40..247 | 671 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14758-PA | 210 | GG14758-PA | 1..210 | 40..247 | 859 | 92.4 | Plus |
Dere\GG19821-PA | 210 | GG19821-PA | 1..210 | 40..247 | 859 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15484-PA | 193 | GH15484-PA | 1..193 | 40..247 | 492 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mwh-PB | 1068 | CG43772-PB | 1..207 | 40..246 | 1108 | 100 | Plus |
mwh-PC | 1069 | CG43772-PC | 1..208 | 40..246 | 1096 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16760-PA | 181 | GI16760-PA | 1..178 | 40..244 | 424 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16155-PA | 196 | GL16155-PA | 31..194 | 87..246 | 449 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28403-PA | 213 | GA28403-PA | 1..211 | 40..246 | 583 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14377-PA | 208 | GM14377-PA | 1..208 | 40..247 | 1093 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13592-PA | 208 | GD13592-PA | 1..208 | 40..247 | 1095 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12506-PA | 188 | GJ12506-PA | 1..185 | 40..244 | 511 | 63.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21073-PA | 219 | GK21073-PA | 24..219 | 59..247 | 464 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21121-PA | 211 | GE21121-PA | 1..211 | 40..247 | 949 | 93.4 | Plus |
Translation from 2 to 745
> RT07968.hyp QLRYSNSYSHPCRLPTNICYPCPCHIRQCLTAANPQHCKMGNRIASSRGA DGAGEGAAGEGNSRFNTRRRYQQHKREYCLQNEYRSKTLPARHPHHSDPH QSHQKCSAQERLGSSSCLGAGQNASNNATPHNGETSRVLFLLYLIHRTWN VVMDTMDSRTKSRSARGNSPQKEGPVDIELQPRVLDEECSIGITDLDASS FCSQYSCCSCSYCDVETTGTQTNVYSSIGDDFSLDSMFEAGKSMVDR*