BDGP Sequence Production Resources |
Search the DGRC for RT08607
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 86 |
Well: | 7 |
Vector: | pCR2.1 |
Associated Gene/Transcript | CG18094-RA |
Protein status: | RT08607.pep: gold |
Sequenced Size: | 1138 |
1138 bp assembled on 2010-06-02
GenBank Submission: BT124970.1
> RT08607.complete ATGACTACTAAAACTGGAACTTATAGACCTTCGGCTAGCCTTATTGTAGC CGCCAAAGAGGATTCTTTAGAGGACTACGACTACAGATTATTGTTGATTA AACGAACTGAAAAAACTTCCTATGCATTGAACCATTGCGTCTTTCCTGGC GGCGTCTTCGATCCTATAGAAGATCAATCTGCGAAATGGATAACTTTTTT CAAATCCTTTGGGGTGACCGATGAACAATTAAAAATGTGTAGGCACAATC AGGATTCTCCAAGGCCTGAGTTTCTATCCGGTGGAGACCATATTTCAAGG GACATTGCACTGCGACTGACTGCGCTCAGGGAAACCTTTGAAGAGGTGGG CATCTTGATTTGCACAGAACAGGACGACATACAAAAATGGGATTCTAAAT CGGGTCATCCTAGAACCGTGCTTCTCGAGTCAAGCGAACACTTCGAATGG CAACATCGGGTTCACAATGATGCCTCACAGTTTCTGGAACTCTTTCGGCA TTATAAAGTCATTCCCAATATCTGGTCTCTTCAGGAATGGTCCATTTGGA GGACAGCAGCCACTGCCAATCGGAAATATGACACTGTTTATTATATCACC ATGTTAGATAAGTACACCAGGAATATAAAGCTGCTTCTGGAACCGCACGA GGTGGCTTCGGCCCACTGGTTGAGTCCGATCGAGGCTTGGTCGAGCTCAC AGAAAGCCATTATTTGGCTCCCGTTCATGCTGCTCTATGACATCGCTCGT CTGATGAACTTCTATAGCTTTCAGGAGCTTCTCAACTTCTCCCGCCAAAG GAGCTGCAATGGAAGCACAATGGTGCAGCCCGTCTACTATCGCTGCGATG ACTGCATGTTTGGAGTTCTTCCTGGTGATGAGCTCTATCCCAAAGAACCA GGCGCTTGTACACAAACAATTATCTTGTCGGGATCGGTGGACGACCTTCA TCGAAAGTCCAAGCAATACAATCGCTATATCGTCTACGACTTCCACAAGG TCGTACTGGCCTCCAATATACCGCCCTGCGATGGGCATCTGCCACTGCAG CCTCTTGTCAATAACAAGCTAGCCAAGTTGTAGTAAAAGAATATAGTTTT AATAGAAAATATATATATTTCCTCTTGCGCTACAACAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
412 | 7567 | 412 412 7567bp | 1125..1221 | 1022..1117 | 122 | 59.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 19489025..19489111 | 1..87 | 100 | -> | Plus |
chr2L | 19489173..19490221 | 88..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18094-RA | 1..1083 | 1..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18094-RA | 1..1083 | 1..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18094-RA | 1..1083 | 1..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18094-RA | 1..1083 | 1..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18094-RA | 1..1136 | 1..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18094-RA | 1..1133 | 1..1133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18094-RA | 64..1196 | 1..1133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18094-RA | 64..1196 | 1..1133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19490486..19490572 | 1..87 | 100 | -> | Plus |
2L | 19490634..19491682 | 88..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19490486..19490572 | 1..87 | 100 | -> | Plus |
2L | 19490634..19491682 | 88..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19490486..19490572 | 1..87 | 100 | -> | Plus |
2L | 19490634..19491682 | 88..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 19490486..19490572 | 1..87 | 100 | -> | Plus |
arm_2L | 19490634..19491682 | 88..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19490634..19491682 | 88..1136 | 100 | Plus | |
2L | 19490486..19490572 | 1..87 | 100 | -> | Plus |
Translation from 0 to 1082
> RT08607.pep MTTKTGTYRPSASLIVAAKEDSLEDYDYRLLLIKRTEKTSYALNHCVFPG GVFDPIEDQSAKWITFFKSFGVTDEQLKMCRHNQDSPRPEFLSGGDHISR DIALRLTALRETFEEVGILICTEQDDIQKWDSKSGHPRTVLLESSEHFEW QHRVHNDASQFLELFRHYKVIPNIWSLQEWSIWRTAATANRKYDTVYYIT MLDKYTRNIKLLLEPHEVASAHWLSPIEAWSSSQKAIIWLPFMLLYDIAR LMNFYSFQELLNFSRQRSCNGSTMVQPVYYRCDDCMFGVLPGDELYPKEP GACTQTIILSGSVDDLHRKSKQYNRYIVYDFHKVVLASNIPPCDGHLPLQ PLVNNKLAKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14240-PA | 353 | GF14240-PA | 2..353 | 8..360 | 1331 | 67.4 | Plus |
Dana\GF15630-PA | 352 | GF15630-PA | 10..329 | 9..326 | 587 | 38.1 | Plus |
Dana\GF15631-PA | 342 | GF15631-PA | 12..310 | 30..326 | 525 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21188-PA | 361 | GG21188-PA | 4..361 | 3..360 | 1715 | 88.3 | Plus |
Dere\GG21628-PA | 351 | GG21628-PA | 9..338 | 9..333 | 547 | 36.8 | Plus |
Dere\GG21629-PA | 341 | GG21629-PA | 10..333 | 29..350 | 529 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11106-PA | 360 | GH11106-PA | 10..360 | 7..360 | 1031 | 54.1 | Plus |
Dgri\GH10627-PA | 338 | GH10627-PA | 1..327 | 32..348 | 540 | 36.4 | Plus |
Dgri\GH10625-PA | 349 | GH10625-PA | 10..346 | 9..351 | 532 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18094-PB | 360 | CG18094-PB | 1..360 | 1..360 | 1935 | 100 | Plus |
CG18094-PA | 360 | CG18094-PA | 1..360 | 1..360 | 1935 | 100 | Plus |
CG10195-PB | 361 | CG10195-PB | 10..349 | 8..347 | 540 | 35.3 | Plus |
CG10195-PC | 361 | CG10195-PC | 10..349 | 8..347 | 540 | 35.3 | Plus |
CG10194-PA | 351 | CG10194-PA | 9..348 | 9..351 | 537 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18228-PA | 358 | GI18228-PA | 3..358 | 2..360 | 1027 | 53.3 | Plus |
Dmoj\GI19813-PA | 333 | GI19813-PA | 1..330 | 32..356 | 508 | 35.4 | Plus |
Dmoj\GI19791-PA | 233 | GI19791-PA | 1..230 | 116..351 | 367 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21217-PA | 362 | GL21217-PA | 4..362 | 2..360 | 1335 | 66.9 | Plus |
Dper\GL21100-PA | 352 | GL21100-PA | 10..349 | 9..351 | 629 | 39.1 | Plus |
Dper\GL21101-PA | 359 | GL21101-PA | 1..356 | 1..356 | 587 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28769-PA | 362 | GA28769-PA | 4..362 | 2..360 | 1344 | 67.4 | Plus |
Dpse\GA10146-PA | 352 | GA10146-PA | 10..349 | 9..351 | 629 | 39.1 | Plus |
Dpse\GA29071-PA | 359 | GA29071-PA | 1..356 | 1..356 | 580 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17354-PA | 360 | GM17354-PA | 1..360 | 1..360 | 1804 | 92.2 | Plus |
Dsec\GM17006-PA | 351 | GM17006-PA | 1..348 | 1..351 | 538 | 34.9 | Plus |
Dsec\GM17007-PA | 341 | GM17007-PA | 10..333 | 29..350 | 528 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24212-PA | 223 | GD24212-PA | 1..221 | 1..226 | 1052 | 88.5 | Plus |
Dsim\GD24213-PA | 118 | GD24213-PA | 1..118 | 243..360 | 639 | 94.9 | Plus |
Dsim\GD21756-PA | 341 | GD21756-PA | 10..333 | 29..350 | 538 | 36.4 | Plus |
Dsim\GD21755-PA | 351 | GD21755-PA | 1..348 | 1..351 | 538 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18136-PA | 360 | GJ18136-PA | 7..360 | 3..360 | 1064 | 56 | Plus |
Dvir\GJ18098-PA | 376 | GJ18098-PA | 17..371 | 8..354 | 598 | 37.8 | Plus |
Dvir\GJ18096-PA | 346 | GJ18096-PA | 10..343 | 9..351 | 542 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18187-PA | 358 | GK18187-PA | 6..358 | 2..360 | 1068 | 55 | Plus |
Dwil\GK24223-PA | 340 | GK24223-PA | 7..332 | 5..329 | 580 | 37.4 | Plus |
Dwil\GK18202-PA | 347 | GK18202-PA | 1..339 | 1..347 | 557 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13260-PA | 361 | GE13260-PA | 3..361 | 2..360 | 1702 | 86.9 | Plus |
Dyak\GE12649-PA | 365 | GE12649-PA | 10..353 | 8..347 | 549 | 35.5 | Plus |
Dyak\GE12648-PA | 351 | GE12648-PA | 9..348 | 9..351 | 546 | 34.6 | Plus |
Translation from 1 to 1082
> RT08607.hyp MTTKTGTYRPSASLIVAAKEDSLEDYDYRLLLIKRTEKTSYALNHCVFPG GVFDPIEDQSAKWITFFKSFGVTDEQLKMCRHNQDSPRPEFLSGGDHISR DIALRLTALRETFEEVGILICTEQDDIQKWDSKSGHPRTVLLESSEHFEW QHRVHNDASQFLELFRHYKVIPNIWSLQEWSIWRTAATANRKYDTVYYIT MLDKYTRNIKLLLEPHEVASAHWLSPIEAWSSSQKAIIWLPFMLLYDIAR LMNFYSFQELLNFSRQRSCNGSTMVQPVYYRCDDCMFGVLPGDELYPKEP GACTQTIILSGSVDDLHRKSKQYNRYIVYDFHKVVLASNIPPCDGHLPLQ PLVNNKLAKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18094-PB | 360 | CG18094-PB | 1..360 | 1..360 | 1935 | 100 | Plus |
CG18094-PA | 360 | CG18094-PA | 1..360 | 1..360 | 1935 | 100 | Plus |
CG10195-PB | 361 | CG10195-PB | 10..349 | 8..347 | 540 | 35.3 | Plus |
CG10195-PC | 361 | CG10195-PC | 10..349 | 8..347 | 540 | 35.3 | Plus |
CG10194-PA | 351 | CG10194-PA | 9..348 | 9..351 | 537 | 34.9 | Plus |